DN620976

Overview
NameDN620976
Unique NameDN620976
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length634
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DN620976 vs. ExPASy Swiss-Prot
Match: IKBL2_HUMAN (NF-kappa-B inhibitor-like protein 2 OS=Homo sapiens GN=NFKBIL2 PE=1 SV=2)

HSP 1 Score: 68.9366 bits (167), Expect = 2.381e-11
Identity = 54/175 (30.86%), Postives = 78/175 (44.57%), Query Frame = 3
Query:   27 MIESMVHEQLGPFTLQRKASRKRFFRSVIDTDDRGWTPLHIGARKGDIKLVKQLLDEGMDVNVAAWGPKSKGVTPLHLAAQGGHLEVMDVLLERGADIDARTKGACGWTPLHTAAK-------------ERKKEAVRFLIENGAFLPDDINDSRF------------NPPLHYCP 476
            M E+++H       L+R     R    +   D  GWTPLH     G +++V+ LLD G  V+    G   +G+TPLH A   GH EV ++LLERGA +  RT+   G +PL T  +              +K  A+  L++  A   D  +   F            +PPL  CP
Sbjct:  528 MGETLLHRACIEGQLRRVQDLVRQGHPLNPRDYCGWTPLHEACNYGHLEIVRFLLDHGAAVDDPG-GQGCEGITPLHDALNCGHFEVAELLLERGASVTLRTRK--GLSPLETLQQWVKLYRRDLDLETRQKARAMEMLLQAAASGQDPHSSQAFHTPSSLLFDPETSPPLSPCP 699          
BLAST of DN620976 vs. ExPASy Swiss-Prot
Match: LITD_LATTR (Delta-latroinsectotoxin-Lt1a OS=Latrodectus tredecimguttatus PE=1 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 4.061e-11
Identity = 40/99 (40.40%), Postives = 56/99 (56.57%), Query Frame = 3
Query:  123 DRGWTPLHIGARKGDIKLVKQLLDEGMDVNVAAWGPKSKGVTPLHLAAQGGHLEVMDVLLERGADIDARTKGACGWTPLHTAAKERKKEAVRFLIENGA 419
            D   T LH+    G I ++K+LL  G ++         +G T LH+AA     E+  VL+E GADI+AR+  A   TPLH+AAK  +K  V +L+E GA
Sbjct:  739 DGNLTVLHLAVSTGQINIIKELLKRGSNIEEKT----GEGYTSLHIAAMRKEPEIAVVLIENGADIEARS--ADNLTPLHSAAKIGRKSTVLYLLEKGA 831          
BLAST of DN620976 vs. ExPASy Swiss-Prot
Match: TNI3K_RAT (Serine/threonine-protein kinase TNNI3K OS=Rattus norvegicus GN=Tnni3k PE=2 SV=3)

HSP 1 Score: 67.781 bits (164), Expect = 5.304e-11
Identity = 43/115 (37.39%), Postives = 61/115 (53.04%), Query Frame = 3
Query:  129 GWTPLHIGARKGDIKLVKQLLDEGMDVNVAAWGPKSKGVTPLHLAAQGGHLEVMDVLLERGADIDARTKGACGWTPLHTAAKERKKEAVRFLIENGAFLPDDINDSRFNPPLHYC 473
            G T LHI A  G  +  + LL  G +VNV      +   TPLH+AA  GH +V  VLL+ GAD++    G  G  PLH A+ +     V+ L+E G+    +  D+  + PLH+C
Sbjct:  134 GLTALHIAAIAGHPEAAEVLLQHGANVNVQ----DAVFFTPLHIAAYYGHEQVTSVLLKFGADVNV--SGEVGDRPLHLASAKGFFNIVKLLVEEGSKADVNAQDNEDHVPLHFC 242          
BLAST of DN620976 vs. ExPASy Swiss-Prot
Match: TNI3K_HUMAN (Serine/threonine-protein kinase TNNI3K OS=Homo sapiens GN=TNNI3K PE=1 SV=2)

HSP 1 Score: 67.3958 bits (163), Expect = 6.927e-11
Identity = 40/106 (37.74%), Postives = 60/106 (56.60%), Query Frame = 3
Query:  129 GWTPLHIGARKGDIKLVKQLLDEGMDVNVAAWGPKSKGVTPLHLAAQGGHLEVMDVLLERGADIDARTKGACGWTPLHTAAKERKKEAVRFLIENGAFLPDDINDS 446
            G+T LH+   K + +L+  LL  G D+    +G    G+T LH+A   GHLE  DVLL+ GA+++   + A  +TPLH AA    ++  R L++ GA    D+N S
Sbjct:  202 GFTALHLAVYKDNAELITSLLHSGADIQQVGYG----GLTALHIATIAGHLEAADVLLQHGANVN--IQDAVFFTPLHIAAYYGHEQVTRLLLKFGA----DVNVS 297          
The following BLAST results are available for this feature:
BLAST of DN620976 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 14
Match NameE-valueIdentityDescription
IKBL2_HUMAN2.381e-1130.86NF-kappa-B inhibitor-like protein 2 OS=Homo sapien... [more]
LITD_LATTR4.061e-1140.40Delta-latroinsectotoxin-Lt1a OS=Latrodectus tredec... [more]
TNI3K_RAT5.304e-1137.39Serine/threonine-protein kinase TNNI3K OS=Rattus n... [more]
TNI3K_HUMAN6.927e-1137.74Serine/threonine-protein kinase TNNI3K OS=Homo sap... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_06B06_r Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0006B06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN620976 ID=DN620976; Name=DN620976; organism=Citrus sinensis; type=EST; length=634bp
ACTAAGAGAAAAAGAAAGAAGGAAGGATGATAGAAAGCATGGTGCATGAG
CAACTGGGTCCGTTTACGCTGCAGCGTAAGGCTTCTAGGAAGCGGTTCTT
TAGGTCAGTGATCGATACTGACGATAGGGGCTGGACTCCTCTTCATATCG
GTGCCCGTAAAGGTGATATCAAACTGGTAAAGCAACTTCTTGATGAAGGA
ATGGATGTGAATGTGGCAGCATGGGGCCCCAAATCAAAAGGGGTGACTCC
ACTCCACCTTGCTGCTCAGGGTGGGCACCTTGAAGTCATGGATGTTTTGC
TTGAGCGAGGCGCTGACATTGATGCTAGAACCAAGGGTGCTTGCGGCTGG
ACCCCGCTTCACACTGCAGCCAAGGAAAGAAAGAAGGAAGCTGTTAGATT
CCTGATTGAGAATGGAGCTTTTCTGCCAGATGACATCAACGATAGCAGGT
TCAATCCGCCACTTCATTATTGCCCTAGTCTTGAATGGGCCTATGAGGAG
ATGATGCGGTTTCAAAGAGAGAGCTTTTCAGCAGGCGAGACCTCTTACAG
CTCTGAGAGTTAAATGCTCTCTCCCGCCTGCTGGTTCACATGATGCCACT
GCTTTGGTTGGATTTGGCATCTGATGCTGTTTTA
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