DN620970

Overview
NameDN620970
Unique NameDN620970
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length606
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DN620970 vs. ExPASy Swiss-Prot
Match: COMT1_ROSCH (Caffeic acid 3-O-methyltransferase OS=Rosa chinensis GN=COMT1 PE=2 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 2.050e-17
Identity = 59/191 (30.89%), Postives = 96/191 (50.26%), Query Frame = 3
Query:   45 KKVRLAIMELANMISVPMSLTAAIRLHVPDAIWQGGANTPLSASQILTRILPSGGGDAENLQRILRLLTSYGVFSEHR----EFGGERKYSLTEIGKSLVTDAEGLSYAPYVLQHHQDALMSAWPLVHEAVLDPTIEPFVKVHGEPAYSYYGKKPEMNGLMRKAMSGVSVPFMTSVLDGYDGFKGVKRLVD 605
            ++  L  M+LA+   +PM L AAI L + + + + G    LS + + +++          L R+LRLL SY + +       +   ER Y L  + K L  + +G+S A   L +    L+ +W  + +AVLD  I PF K +G  A+ Y+G  P  N +  K M+  S   M  +L+ Y GF+G+  +VD
Sbjct:   17 EEANLFAMQLASASVLPMVLKAAIELDLLEIMAKAGPGAFLSPNDLASQLPTKNPEAPVMLDRMLRLLASYSILTYSLRTLPDGKVERLYGLGPVCKFLTKNEDGVSIAALCLMNQDKVLVESWYHLKDAVLDGGI-PFNKAYGMTAFDYHGTDPRFNKVFNKGMADHSTITMKKILETYKGFEGLTSIVD 206          
BLAST of DN620970 vs. ExPASy Swiss-Prot
Match: COMT2_POPTM (Caffeic acid 3-O-methyltransferase 2 OS=Populus tremuloides GN=OMT2 PE=3 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 2.678e-17
Identity = 58/184 (31.52%), Postives = 90/184 (48.91%), Query Frame = 3
Query:   66 MELANMISVPMSLTAAIRLHVPDAIWQGGANTPLSASQILTRILPSGGGDAENLQRILRLLTSYGVF----SEHREFGGERKYSLTEIGKSLVTDAEGLSYAPYVLQHHQDALMSAWPLVHEAVLDPTIEPFVKVHGEPAYSYYGKKPEMNGLMRKAMSGVSVPFMTSVLDGYDGFKGVKRLVD 605
            ++L +   +PM L  AI L + + + + G    L  S I + +          L RILRLL SY +      +  +   ER Y L  + K L  + +G+S +P  L +    LM +W  + +A+L+  I PF K +G  A+ Y+G  P  N +  K MS  S   M  +L+ Y GF+G+  LVD
Sbjct:   23 LQLISSSVLPMVLKTAIELDLLEIMAKAGPGALLPPSDIASHLPTKNPNAPVMLDRILRLLASYSILICSLRDLPDGKVERLYGLASVCKFLTRNEDGVSVSPLCLMNQDKVLMESWYHLKDAILEGGI-PFNKAYGMTAFEYHGTDPRFNKVFNKGMSVHSKMAMKKILETYKGFEGLASLVD 205          
BLAST of DN620970 vs. ExPASy Swiss-Prot
Match: COMT1_CAPCH (Caffeic acid 3-O-methyltransferase OS=Capsicum chinense GN=COMT PE=2 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 5.965e-17
Identity = 55/184 (29.89%), Postives = 92/184 (50.00%), Query Frame = 3
Query:   66 MELANMISVPMSLTAAIRLHVPDAIWQGGANTPLSASQILTRILPSGGGDAENLQRILRLLTSYGVFS----EHREFGGERKYSLTEIGKSLVTDAEGLSYAPYVLQHHQDALMSAWPLVHEAVLDPTIEPFVKVHGEPAYSYYGKKPEMNGLMRKAMSGVSVPFMTSVLDGYDGFKGVKRLVD 605
            M+LA+   +PM L A + L + + + + G    +S S++  ++          L R+ RLL +Y V +       +   ER YSL  + K L  + +G+S AP +L +    LM +W  + +AVLD  + PF K +G   + Y+G  P  N +    MS  +   M  +L+ Y GF+G+  +VD
Sbjct:   20 MQLASASVLPMVLKATVELDLLEIMAKSGPGAFISPSELAAQLPTKNPEAPVMLDRMFRLLATYSVLNCTLRTLPDGRVERLYSLAPVCKFLTKNGDGVSIAPILLMNQDKVLMESWYHLTDAVLDGGV-PFNKAYGMTTFEYHGTDPRFNKVFNCGMSDHTTLSMKKILEDYTGFEGLNSIVD 202          
BLAST of DN620970 vs. ExPASy Swiss-Prot
Match: IEMT_CLABR ((Iso)eugenol O-methyltransferase OS=Clarkia breweri GN=IEMT1 PE=1 SV=2)

HSP 1 Score: 85.8853 bits (211), Expect = 1.736e-16
Identity = 61/192 (31.77%), Postives = 98/192 (51.04%), Query Frame = 3
Query:   45 KKVRLAIMELANMISVPMSLTAAIRLHVPDAIWQGGANTPLSASQILTRILPSGGGDAE-NLQRILRLLTSYGVFSEH-REFGG---ERKYSLTEIGKSLVTDAEGLSYAPYVLQHHQDALMSAWPLVHEAVLDPTIEPFVKVHGEPAYSYYGKKPEMNGLMRKAMSGVSVPFMTSVLDGYDGFKGVKRLVD 605
            ++  L  M+LA+   +PM+L AAI L V + + +    +   +   +   LP+   +A   L R+LRLL SY V +   RE      ER Y L  + K L  + +G+S AP++L      L+  W  + +A+L+  I PF K +G   + Y+G     N +  K MS  S   M  +L+ Y+GF+G+  +VD
Sbjct:   19 EEANLFAMQLASAAVLPMALKAAIELDVLEIMAKSVPPSGYISPAEIAAQLPTTNPEAPVMLDRVLRLLASYSVVTYTLRELPSGKVERLYGLAPVCKFLTKNEDGVSLAPFLLTATDKVLLEPWFYLKDAILEGGI-PFNKAYGMNEFDYHGTDHRFNKVFNKGMSSNSTITMKKILEMYNGFEGLTTIVD 209          
BLAST of DN620970 vs. ExPASy Swiss-Prot
Match: CHOMT_MEDSA (Isoliquiritigenin 2'-O-methyltransferase OS=Medicago sativa PE=1 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 1.736e-16
Identity = 70/206 (33.98%), Postives = 99/206 (48.06%), Query Frame = 3
Query:   18 EDNECRDGGKKVRLAIMELANMISVPMSLTAAIRLHVPDAIWQGGANTP----LSASQILTRILPSGG-GDAEN-LQRILRLLTSYGVFSEH----REFGGERKYSLTEIGKSLVTDAEGLSYAPYVLQHHQDALMSAWPLVHEAVLDPTIEPFVKVHGEPAYSYYGKKPEMNGLMRKAMSGVSVPFMTSVLDGYDGFKGVKRLVD 605
            ED+ C        L+ M L   +  P  L AAI L++ + I +    TP    +S S+I +++  S    D  N L R+LRLL SY V +       + G ER Y L+ +GK LV D      A +       AL+  W    EAV+D  I+ F  VHG   Y + GK  +MN +  K+M  V    M  +L+ Y GF+G+  LVD
Sbjct:   21 EDSAC--------LSAMVLTTNLVYPAVLNAAIDLNLFEIIAKA---TPPGAFMSPSEIASKLPASTQHSDLPNRLDRMLRLLASYSVLTSTTRTIEDGGAERVYGLSMVGKYLVPDESRGYLASFTTFLCYPALLQVWMNFKEAVVDEDIDLFKNVHGVTKYEFMGKDKKMNQIFNKSMVDVCATEMKRMLEIYTGFEGISTLVD 215          
BLAST of DN620970 vs. ExPASy Swiss-Prot
Match: IMT1_MESCR (Inositol 4-methyltransferase OS=Mesembryanthemum crystallinum GN=IMT1 PE=1 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 2.506e-15
Identity = 53/181 (29.28%), Postives = 88/181 (48.62%), Query Frame = 3
Query:   72 LANMISVPMSLTAAIRLHVPDAIWQGGANTPLSASQILTRILPSGGGDAENLQRILRLLTSYGVFS---EHREFGGERKYSLTEIGKSLVTDAEGLSYAPYVLQHHQDALMSAWPLVHEAVLDPTIEPFVKVHGEPAYSYYGKKPEMNGLMRKAMSGVSVPFMTSVLDGYDGFKGVKRLVD 605
            LAN  + PM L +A  L + D   + G    +S S+I ++I          L R+LRLL S+ V +   +  E G +R Y    +   L ++    S  P ++ HH   +M +W  +++ +L+  + PF + HG   + Y G     N +  + M+  ++  M  +LD Y+GF  VK LVD
Sbjct:   28 LANAAAFPMILKSAFELKILDIFSKAGEGVFVSTSEIASQIGAKNPNAPVLLDRMLRLLASHSVLTCKLQKGEGGSQRVYGPAPLCNYLASNDGQGSLGPLLVLHHDKVMMESWFHLNDYILEGGV-PFKRAHGMIQFDYTGTDERFNHVFNQGMAHHTILVMKKLLDNYNGFNDVKVLVD 207          
BLAST of DN620970 vs. ExPASy Swiss-Prot
Match: OMT1_ORYSJ (Quercetin 3-O-methyltransferase 1 OS=Oryza sativa subsp. japonica GN=ROMT-9 PE=1 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 5.583e-15
Identity = 60/191 (31.41%), Postives = 90/191 (47.12%), Query Frame = 3
Query:   66 MELANMISVPMSLTAAIRLHVPD-----AIWQGGANTPLSASQILTRILPSGGGDA--ENLQRILRLLTSYGVFSEHREFGGE----RKYSLTEIGKSLVTDAEGLSYAPYVLQHHQDALMSAWPLVHEAVLDPTIEPFVKVHGEPAYSYYGKKPEMNGLMRKAMSGVSVPFMTSVLDGYDGFKGVKRLVD 605
            ++LA+   +PM+L  AI L + +     A+  GG    L     +   LPS    A  + + R+LRLL SY V     E G +    R+Y+   + K L  + +G+S A   L +    LM +W  + +AVLD  I PF K +G  A+ Y+G     N +  + M   SV     +LD Y GF     +VD
Sbjct:   21 LQLASSSILPMTLKNAIELGLLETLQSAAVAGGGGKAALLTPAEVADKLPSKANPAAADMVDRMLRLLASYNVVRCEMEEGADGKLSRRYAAAPVCKWLTPNEDGVSMAALALMNQDKVLMESWYYLKDAVLDGGI-PFNKAYGMTAFEYHGTDARFNRVFNEGMKNHSVIITKKLLDLYTGFDAASTVVD 210          
The following BLAST results are available for this feature:
BLAST of DN620970 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 27
Match NameE-valueIdentityDescription
COMT1_ROSCH2.050e-1730.89Caffeic acid 3-O-methyltransferase OS=Rosa chinens... [more]
COMT2_POPTM2.678e-1731.52Caffeic acid 3-O-methyltransferase 2 OS=Populus tr... [more]
COMT1_CAPCH5.965e-1729.89Caffeic acid 3-O-methyltransferase OS=Capsicum chi... [more]
IEMT_CLABR1.736e-1631.77(Iso)eugenol O-methyltransferase OS=Clarkia brewer... [more]
CHOMT_MEDSA1.736e-1633.98Isoliquiritigenin 2'-O-methyltransferase OS=Medica... [more]
IMT1_MESCR2.506e-1529.28Inositol 4-methyltransferase OS=Mesembryanthemum c... [more]
OMT1_ORYSJ5.583e-1531.41Quercetin 3-O-methyltransferase 1 OS=Oryza sativa ... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_06B03_r Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0006B03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN620970 ID=DN620970; Name=DN620970; organism=Citrus sinensis; type=EST; length=606bp
GTCAGTAAGCAGTAATGGAAGATAACGAGTGCAGAGATGGCGGGAAGAAG
GTAAGACTGGCCATAATGGAGCTGGCCAACATGATAAGTGTTCCCATGTC
TCTAACCGCTGCCATCCGTCTCCACGTACCGGATGCCATCTGGCAAGGTG
GGGCCAACACCCCTCTCTCCGCCTCCCAGATCTTGACACGTATCCTCCCA
TCCGGCGGTGGGGACGCCGAGAACTTGCAACGTATCCTCCGCTTGCTCAC
CAGCTACGGCGTGTTCTCGGAGCATCGCGAGTTTGGAGGCGAAAGGAAGT
ACAGCCTCACCGAGATTGGGAAATCCCTCGTTACTGATGCCGAGGGTCTA
TCGTACGCGCCCTACGTGCTCCAGCATCACCAGGACGCGCTTATGAGCGC
GTGGCCTTTGGTGCACGAGGCCGTTCTGGACCCAACTATTGAGCCATTTG
TGAAAGTCCATGGCGAGCCGGCATATAGTTATTATGGGAAGAAGCCTGAA
ATGAACGGCTTGATGCGAAAAGCCATGTCGGGAGTGTCCGTGCCGTTCAT
GACGTCCGTTTTGGACGGTTACGATGGGTTCAAAGGTGTGAAGCGATTGG
TTGATG
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