DN620946

Overview
NameDN620946
Unique NameDN620946
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length727
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DN620946 vs. ExPASy Swiss-Prot
Match: PLDA1_VIGUN (Phospholipase D alpha 1 OS=Vigna unguiculata GN=PLD1 PE=2 SV=1)

HSP 1 Score: 160.999 bits (406), Expect = 5.916e-39
Identity = 76/147 (51.70%), Postives = 106/147 (72.11%), Query Frame = -3
Query:  285 RFMIYVHSKGMIVDDEYVILGSANINQRSMEGTRDTEIAMGAYQPEYTWARLKHHPYGQIYGYRMSLWAEHLGYIEDCFGQPETLECVRKVRSVGNNNWQQFAADD-QSEMRSHLIKYPVEVDRKGKVRPIPGYETFPDVGGNIVGS 722
            RFMIYVH+K MIVDDEY+I+GSANINQRSM+G RD+EIAMG YQP Y  A  +    GQ+YG+RMSLW EHLG + D F +PE+ EC+ KV  + +  W  ++++  + ++  HL++YP+ V  +G+V  +PG+E FPD    I+G+
Sbjct:  654 RFMIYVHTKMMIVDDEYIIIGSANINQRSMDGARDSEIAMGGYQP-YHLANTQ-PARGQVYGFRMSLWYEHLGMLHDTFQRPESEECINKVNQIADKYWDLYSSESLERDLPGHLLRYPIGVASEGEVTELPGFEFFPDTKARILGA 798          
BLAST of DN620946 vs. ExPASy Swiss-Prot
Match: PLDA1_PIMBR (Phospholipase D alpha 1 OS=Pimpinella brachycarpa GN=PLD1 PE=2 SV=1)

HSP 1 Score: 160.614 bits (405), Expect = 7.726e-39
Identity = 74/147 (50.34%), Postives = 107/147 (72.79%), Query Frame = -3
Query:  285 RFMIYVHSKGMIVDDEYVILGSANINQRSMEGTRDTEIAMGAYQPEYTWARLKHHPYGQIYGYRMSLWAEHLGYIEDCFGQPETLECVRKVRSVGNNNWQQFAADD-QSEMRSHLIKYPVEVDRKGKVRPIPGYETFPDVGGNIVGS 722
            RFMIYVH+K MIVDDEY+I+GSANINQRSM+G +D+EIAMGAYQP +   R      GQI+G+RMSLW EHLG ++D    PE+++CV+KV +V +  W  ++++  ++++  HL++YP+ V  +G V  +PG E FPD    ++G+
Sbjct:  653 RFMIYVHAKMMIVDDEYIIIGSANINQRSMDGAKDSEIAMGAYQPHHLATR--EPARGQIHGFRMSLWYEHLGMLDDTLALPESVDCVQKVNTVADKYWDLYSSETLENDLPGHLLRYPIAVASEGNVTELPGTEFFPDTKARVLGA 797          
BLAST of DN620946 vs. ExPASy Swiss-Prot
Match: PLDA1_RICCO (Phospholipase D alpha 1 OS=Ricinus communis GN=PLD1 PE=1 SV=1)

HSP 1 Score: 159.458 bits (402), Expect = 1.721e-38
Identity = 76/147 (51.70%), Postives = 104/147 (70.75%), Query Frame = -3
Query:  285 RFMIYVHSKGMIVDDEYVILGSANINQRSMEGTRDTEIAMGAYQPEYTWARLKHHPYGQIYGYRMSLWAEHLGYIEDCFGQPETLECVRKVRSVGNNNWQQFAADD-QSEMRSHLIKYPVEVDRKGKVRPIPGYETFPDVGGNIVGS 722
            RFMIYVH+K MIVDDEY+I+GSANINQRSM+G RD+EIAMGAYQP +   R      GQI+G+RMSLW EHLG +++ F  PE+ ECVRKV  +    W  ++++  + ++  HL++YP+ V  +G V  +PG E FPD    ++G+
Sbjct:  653 RFMIYVHTKMMIVDDEYIIIGSANINQRSMDGARDSEIAMGAYQPHHLSTR--QPARGQIHGFRMSLWYEHLGMLDESFLNPESEECVRKVNQMAEKYWDLYSSETLEHDLPGHLLRYPIGVASEGDVTELPGTEFFPDTKARVLGA 797          
BLAST of DN620946 vs. ExPASy Swiss-Prot
Match: PLDA1_ARATH (Phospholipase D alpha 1 OS=Arabidopsis thaliana GN=PLDALPHA1 PE=1 SV=2)

HSP 1 Score: 158.303 bits (399), Expect = 3.835e-38
Identity = 73/147 (49.66%), Postives = 104/147 (70.75%), Query Frame = -3
Query:  285 RFMIYVHSKGMIVDDEYVILGSANINQRSMEGTRDTEIAMGAYQPEYTWARLKHHPYGQIYGYRMSLWAEHLGYIEDCFGQPETLECVRKVRSVGNNNWQQFAADD-QSEMRSHLIKYPVEVDRKGKVRPIPGYETFPDVGGNIVGS 722
            RFMIYVH+K MIVDDEY+I+GSANINQRSM+G RD+EIAMG YQP +   R      GQI+G+RMSLW EHLG +++ F  P +LEC+ KV  + +  W  ++++  + ++  HL++YP+ V  +G +  +PG+E FPD    I+G+
Sbjct:  655 RFMIYVHTKMMIVDDEYIIIGSANINQRSMDGARDSEIAMGGYQPHHLSHR--QPARGQIHGFRMSLWYEHLGMLDETFLDPSSLECIEKVNRISDKYWDFYSSESLEHDLPGHLLRYPIGVASEGDITELPGFEFFPDTKARILGT 799          
BLAST of DN620946 vs. ExPASy Swiss-Prot
Match: PLDA1_TOBAC (Phospholipase D alpha 1 OS=Nicotiana tabacum GN=PLD1 PE=2 SV=2)

HSP 1 Score: 157.147 bits (396), Expect = 8.542e-38
Identity = 75/147 (51.02%), Postives = 104/147 (70.75%), Query Frame = -3
Query:  285 RFMIYVHSKGMIVDDEYVILGSANINQRSMEGTRDTEIAMGAYQPEYTWARLKHHPYGQIYGYRMSLWAEHLGYIEDCFGQPETLECVRKVRSVGNNNWQQFAADD-QSEMRSHLIKYPVEVDRKGKVRPIPGYETFPDVGGNIVGS 722
            RFMIYVHSK MIVDDEY+I+GSANINQRSM+G RD+EIAMGAYQP +   R      GQI+G+RM+LW EHLG +++ F  PE+ ECV KV  + +  W  ++++  + ++  HL++YP+ V  +G V  +PG E FPD    ++G+
Sbjct:  653 RFMIYVHSKMMIVDDEYIIVGSANINQRSMDGARDSEIAMGAYQPHHLATR--EPARGQIHGFRMALWYEHLGMLDETFLHPESEECVSKVNRMADKYWDLYSSESLERDLPGHLLRYPIGVASEGDVTELPGAEHFPDTKARVLGT 797          
BLAST of DN620946 vs. ExPASy Swiss-Prot
Match: PLDA2_ORYSJ (Phospholipase D alpha 2 OS=Oryza sativa subsp. japonica GN=PLD2 PE=2 SV=2)

HSP 1 Score: 156.762 bits (395), Expect = 1.116e-37
Identity = 77/147 (52.38%), Postives = 105/147 (71.43%), Query Frame = -3
Query:  285 RFMIYVHSKGMIVDDEYVILGSANINQRSMEGTRDTEIAMGAYQPEYTWARLKHHPYGQIYGYRMSLWAEHLGYIEDCFGQPETLECVRKVRSVGNNNWQQFAADD-QSEMRSHLIKYPVEVDRKGKVRPIPGYETFPDVGGNIVGS 722
            RFMIYVHSK MIVDDEY+I+GSANINQRSM+G RD+EIAMGA+QP +   +      GQI+G+RMSLW EHLG + D F  PE+LECV++V  + +  W  +A+D+   ++  HL+ YPV V ++G V  +PG + FPD    ++G+
Sbjct:  662 RFMIYVHSKMMIVDDEYIIVGSANINQRSMDGGRDSEIAMGAFQPCHLNTK-GLVARGQIHGFRMSLWYEHLGMLHDNFLNPESLECVQRVNKMADKYWDLYASDELNDDLPGHLLTYPVRVTKEGTVTELPGAKFFPDTQAPVIGT 807          
BLAST of DN620946 vs. ExPASy Swiss-Prot
Match: PLDA2_ARATH (Phospholipase D alpha 2 OS=Arabidopsis thaliana GN=PLDALPHA2 PE=2 SV=1)

HSP 1 Score: 154.836 bits (390), Expect = 4.240e-37
Identity = 72/146 (49.32%), Postives = 102/146 (69.86%), Query Frame = -3
Query:  288 RFMIYVHSKGMIVDDEYVILGSANINQRSMEGTRDTEIAMGAYQPEYTWARLKHHPYGQIYGYRMSLWAEHLGYIEDCFGQPETLECVRKVRSVGNNNWQQFAADD-QSEMRSHLIKYPVEVDRKGKVRPIPGYETFPDVGGNIVG 722
            RFMIYVH+K MIVDDEY+I+GSANINQRSM+G RD+EIAMG YQP +   R      GQI+G+RMSLW EHLG +++ F  P + EC++KV  V +  W  ++++  + ++  HL++YP+ +  +G +  +PG E FPD    I+G
Sbjct:  655 RFMIYVHTKMMIVDDEYIIIGSANINQRSMDGARDSEIAMGGYQPYHLSTR--QPARGQIHGFRMSLWYEHLGMLDETFLDPSSQECIQKVNRVADKYWDLYSSESLEHDLPGHLLRYPIGIASEGNITELPGCEFFPDTKARILG 798          
BLAST of DN620946 vs. ExPASy Swiss-Prot
Match: PLDZ1_ARATH (Phospholipase D zeta OS=Arabidopsis thaliana GN=PLDZETA PE=2 SV=1)

HSP 1 Score: 153.68 bits (387), Expect = 9.445e-37
Identity = 73/148 (49.32%), Postives = 97/148 (65.54%), Query Frame = -3
Query:  288 RFMIYVHSKGMIVDDEYVILGSANINQRSMEGTRDTEIAMGAYQPEYTWARLKHHPYGQIYGYRMSLWAEHLGYIEDCFGQPETLECVRKVRSVGNNNWQQFAADD---QSEMRSHLIKYPVEVDRKGKVRPIPGYETFPDVGGNIVG 722
            RFMIYVHSK MIVDDEY+I+GSANINQRSM+G RDTEIAMGAYQP +  +     P GQI+ +R+SLW EHL    + F  PE+ EC+R V +  +  W  ++A +     ++  HL+ YP+ +   G+V  + G E FPD    +VG
Sbjct:  661 RFMIYVHSKMMIVDDEYIIIGSANINQRSMDGGRDTEIAMGAYQPSHLLSTNNMRPVGQIFSFRISLWLEHLRVTTNAFQCPESEECIRMVNATADELWGLYSAQEYPRNDDLPGHLLSYPISIGSNGEVTNLAGTEFFPDTNAKVVG 808          
BLAST of DN620946 vs. ExPASy Swiss-Prot
Match: PLDE1_ARATH (Phospholipase D epsilon OS=Arabidopsis thaliana GN=PLDEPSILON PE=2 SV=1)

HSP 1 Score: 120.939 bits (302), Expect = 6.784e-27
Identity = 67/143 (46.85%), Postives = 89/143 (62.24%), Query Frame = -3
Query:  309 RFMIYVHSKGMIVDDEYVILGSANINQRSMEGTRDTEIAMGAYQPEYTWARLKHHPYGQIYGYRMSLWAEHLG---YIED-CFGQPETLECVRKVRSVGNNNWQQFAADDQSEMRS-HLIKYPVEVDRKGKVRPIPGYETFPD 722
            RFM+YVHSK MIVDD Y+++GSANINQRSM+G RDTEIA+G YQ          +   +I  YR+SLW EH G     +D    +PE+LECVR +R++G   W+ ++ D   +M   HL+ YP+ V   G V  + G   FPD
Sbjct:  609 RFMVYVHSKLMIVDDTYILIGSANINQRSMDGCRDTEIAIGCYQ-------TNTNNTNEIQAYRLSLWYEHTGGKITADDLSSSEPESLECVRGLRTIGEQMWEIYSGDKVVDMLGIHLVAYPISVTGDGAVEEV-GDGCFPD 743          
BLAST of DN620946 vs. ExPASy Swiss-Prot
Match: PLD_PHYIN (Phospholipase D OS=Phytophthora infestans GN=PLD PE=3 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 8.902e-11
Identity = 41/106 (38.68%), Postives = 57/106 (53.77%), Query Frame = -3
Query:  411 IYVHSKGMIVDDEYVILGSANINQRSMEGTRDTEIAMGAYQPEYTWARLKHHPYGQ---IYGYRMSLWAEHLGYIED--CFGQPETLECVRKVRSVGNNNWQQFAA 713
            IY+HSK MI DD   ILGSANIN RSM G RD+EIA+     +Y    +   PY +       R+ L+ EHLG  +D      P +    + ++S  ++N + F A
Sbjct: 1251 IYIHSKLMIADDRCAILGSANINDRSMNGDRDSEIALVIEDMQYEDGVMNEKPYRRGVAASKLRLQLFREHLGLADDDLSVADPTSDHTWQAIKSTASSNTKIFEA 1356          
The following BLAST results are available for this feature:
BLAST of DN620946 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 20
Match NameE-valueIdentityDescription
PLDA1_VIGUN5.916e-3951.70Phospholipase D alpha 1 OS=Vigna unguiculata GN=PL... [more]
PLDA1_PIMBR7.726e-3950.34Phospholipase D alpha 1 OS=Pimpinella brachycarpa ... [more]
PLDA1_RICCO1.721e-3851.70Phospholipase D alpha 1 OS=Ricinus communis GN=PLD... [more]
PLDA1_ARATH3.835e-3849.66Phospholipase D alpha 1 OS=Arabidopsis thaliana GN... [more]
PLDA1_TOBAC8.542e-3851.02Phospholipase D alpha 1 OS=Nicotiana tabacum GN=PL... [more]
PLDA2_ORYSJ1.116e-3752.38Phospholipase D alpha 2 OS=Oryza sativa subsp. jap... [more]
PLDA2_ARATH4.240e-3749.32Phospholipase D alpha 2 OS=Arabidopsis thaliana GN... [more]
PLDZ1_ARATH9.445e-3749.32Phospholipase D zeta OS=Arabidopsis thaliana GN=PL... [more]
PLDE1_ARATH6.784e-2746.85Phospholipase D epsilon OS=Arabidopsis thaliana GN... [more]
PLD_PHYIN8.902e-1138.68Phospholipase D OS=Phytophthora infestans GN=PLD P... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_06A13_f Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0006A13, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN620946 ID=DN620946; Name=DN620946; organism=Citrus sinensis; type=EST; length=727bp
TTTTTTTTTTCATATTGAAAGCCAAAGGGCCATTAATTAGATGCAAAAAT
GGAAATAAAAGTTAAAAATCAAATAGACAGGCACATGATTTTCTAACTGT
ATATCTACTTATTTACAAAATCAGGGGATTATCAAACTATGTTAATACCC
ATAGGGAGTCGGAAGCTATACATCAACATGGGTTTTTGATGACACATGTC
AAAATTTGTATGTATCTCTTACTATTTACCTTGTTAACTTCCAGTAACTG
TTCAAATGGTAAGATTCTCCTGAATTGCAAAAAATGAGCCAACTATGTTT
CCTCCCACGTCTGGGAATGTTTCATATCCTGGAATTGGCCTCACCTTGCC
TTTTCGATCCACTTCAACTGGGTACTTTATAAGGTGGCTCCTCATTTCAG
ATTGATCATCTGCAGCAAACTGCTGCCAGTTATTATTGCCTACTGATCTA
ACCTTTCTTACACATTCCAGAGTCTCGGGTTGTCCGAAGCAGTCCTCAAT
GTATCCAAGATGTTCTGCCCATAGCGACATTCTATATCCATAGATCTGTC
CATAAGGATGATGTTTCAGTCTAGCCCAAGTATATTCAGGTTGGTAGGCT
CCCATTGCAATCTCTGTGTCTCTTGTGCCCTCCATGGAGCGCTGATTGAT
GTTTGCAGACCCCAGTATCACATACTCATCATCAACAATCATCCCTTTTG
AATGAACATAAATCATGAATCGTCCAC
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