DN620945
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DN620945 vs. ExPASy Swiss-Prot
Match: EXP24_ORYSJ (Expansin-A24 OS=Oryza sativa subsp. japonica GN=EXPA24 PE=2 SV=2) HSP 1 Score: 157.532 bits (397), Expect = 4.137e-38 Identity = 70/128 (54.69%), Postives = 93/128 (72.66%), Query Frame = 2 Query: 2 FDLSQPVFQHIAQYRAGVVPVAYKRVPCGRRGGIRFTINGHSYFNLVLITNVGGAGDVHAVSIKGSR-TGWQPMSRNWGQNWQSNTYLNGQSLSFKVTTSDGRTVTSYNVAPASWSFGRTY-SGAQFR 379 FD++QP ++ I YRAG++PV Y+RVPC ++GG+RFTINGH YFNLVL+TNV G + ++ I GS T W PM RNWG NW S +YL GQ LSF+VT DG+T+ N+ P+ W FG+T+ S QF+ Sbjct: 151 FDMAQPAWEKIGIYRAGIIPVMYQRVPCVKKGGVRFTINGHDYFNLVLVTNVATTGSIKSMDIMGSNSTDWMPMVRNWGANWHSLSYLTGQMLSFRVTNMDGQTLVFRNIVPSGWKFGQTFASKLQFK 278
BLAST of DN620945 vs. ExPASy Swiss-Prot
Match: EXP22_ARATH (Expansin-A22 OS=Arabidopsis thaliana GN=EXPA22 PE=2 SV=2) HSP 1 Score: 156.377 bits (394), Expect = 9.216e-38 Identity = 69/122 (56.56%), Postives = 90/122 (73.77%), Query Frame = 2 Query: 2 FDLSQPVFQHIAQYRAGVVPVAYKRVPCGRRGGIRFTINGHSYFNLVLITNVGGAGDVHAVSIKGSRTGWQPMSRNWGQNWQSNTYLNGQSLSFKVTTSDGRTVTSYNVAPASWSFGRTYSG 367 FDLS +F IA+Y+AGVVPV Y+R+PC + GG++F G+ YF +VLI NVGGAGD+ V +KG++TGW M +NWGQNW + T L GQ LSF+VTTSDG T +NV P +W FG+T+ G Sbjct: 148 FDLSLAMFLKIAKYKAGVVPVRYRRIPCSKTGGVKFETKGNPYFLMVLIYNVGGAGDIKYVQVKGNKTGWITMKKNWGQNWTTITVLTGQGLSFRVTTSDGITKDFWNVMPKNWGFGQTFDG 269
BLAST of DN620945 vs. ExPASy Swiss-Prot
Match: EXP32_ORYSJ (Expansin-A32 OS=Oryza sativa subsp. japonica GN=EXPA32 PE=2 SV=1) HSP 1 Score: 155.606 bits (392), Expect = 1.572e-37 Identity = 69/125 (55.20%), Postives = 92/125 (73.60%), Query Frame = 2 Query: 2 FDLSQPVFQHIAQYRAGVVPVAYKRVPCGRRGGIRFTINGHSYFNLVLITNVGGAGDVHAVSIKGS-RTGWQPMSRNWGQNWQSNTYLNGQSLSFKVTTSDGRTVTSYNVAPASWSFGRTYSGAQ 373 FDLS P F IAQ +AG+VP++Y+RVPC + GGIR+TI G+ YFNLV+++NVGGAGDV +S+KG+ R W P+ RNWGQ WQ++ L G+SL+F+V T D R TS++V P W FG TY + Sbjct: 142 FDLSMPAFLQIAQEKAGIVPISYRRVPCVKVGGIRYTITGNPYFNLVMVSNVGGAGDVAGLSVKGNKRVKWTPLKRNWGQEWQTSEVLTGESLTFRVMTGDHRKATSWHVLPPDWQFGVTYQATK 266
BLAST of DN620945 vs. ExPASy Swiss-Prot
Match: EXP14_ORYSJ (Expansin-A14 OS=Oryza sativa subsp. japonica GN=EXPA14 PE=2 SV=2) HSP 1 Score: 155.606 bits (392), Expect = 1.572e-37 Identity = 69/128 (53.91%), Postives = 93/128 (72.66%), Query Frame = 2 Query: 2 FDLSQPVFQHIAQYRAGVVPVAYKRVPCGRRGGIRFTINGHSYFNLVLITNVGGAGDVHAVSIKGSR-TGWQPMSRNWGQNWQSNTYLNGQSLSFKVTTSDGRTVTSYNVAPASWSFGRTY-SGAQFR 379 FD++QP ++ I Y AG++PV Y+RVPC ++GG+RFTINGH YFNLVL+TNV G + ++ I GS T W PM RNWG NW S +YL GQ+LSF+VT DG+T+ N+ P+ W FG+T+ S QF+ Sbjct: 135 FDMAQPAWEKIGIYSAGIIPVIYQRVPCIKKGGVRFTINGHDYFNLVLVTNVATTGSIKSMDIMGSNSTDWMPMVRNWGANWHSLSYLTGQTLSFRVTNMDGQTLVFKNIVPSGWKFGQTFTSKLQFK 262
BLAST of DN620945 vs. ExPASy Swiss-Prot
Match: EXP22_ORYSJ (Expansin-A22 OS=Oryza sativa subsp. japonica GN=EXPA22 PE=2 SV=2) HSP 1 Score: 154.836 bits (390), Expect = 2.682e-37 Identity = 69/128 (53.91%), Postives = 93/128 (72.66%), Query Frame = 2 Query: 2 FDLSQPVFQHIAQYRAGVVPVAYKRVPCGRRGGIRFTINGHSYFNLVLITNVGGAGDVHAVSIKGSR-TGWQPMSRNWGQNWQSNTYLNGQSLSFKVTTSDGRTVTSYNVAPASWSFGRTY-SGAQFR 379 FD++QP ++ I YRAG++PV Y+RVPC ++GG+RFTINGH YFNLVL+TNV G + ++ + GS T W PM RNWG NW S +YL GQ LSF+VT DG+T+ N+ P+ W FG+T+ S QF+ Sbjct: 153 FDMAQPAWEKIGIYRAGIIPVIYQRVPCVKKGGVRFTINGHDYFNLVLVTNVATTGLIKSMDVMGSNSTDWLPMVRNWGANWHSLSYLTGQMLSFRVTNMDGQTLVFRNIVPSGWKFGQTFASKLQFK 280
BLAST of DN620945 vs. ExPASy Swiss-Prot
Match: EXP27_ORYSJ (Putative expansin-A27 OS=Oryza sativa subsp. japonica GN=EXPA27 PE=3 SV=2) HSP 1 Score: 154.451 bits (389), Expect = 3.502e-37 Identity = 70/121 (57.85%), Postives = 89/121 (73.55%), Query Frame = 2 Query: 2 FDLSQPVFQHIAQYRAGVVPVAYKRVPCGRRGGIRFTINGHSYFNLVLITNVGGAGDVHAVSIKGSRTGWQPMSRNWGQNWQSNTYLNGQSLSFKVTTSDGRTVTSYNVAPASWSFGRTYS 364 FD+SQP ++ I YRAG+VPV Y+RV C RRGG+RFT+ G +F LVL+ NV G+G V AVS++G+ TGW MSRNWG NWQS L GQ LSF VTT+ G+ + +VAPA W FG+T+S Sbjct: 128 FDMSQPAWERIGVYRAGIVPVLYRRVRCWRRGGVRFTVGGFDHFELVLVANVAGSGSVAAVSVRGAGTGWLQMSRNWGANWQSLAGLAGQPLSFGVTTTGGQYILFQDVAPAGWKFGQTFS 248
BLAST of DN620945 vs. ExPASy Swiss-Prot
Match: EXP26_ARATH (Putative expansin-A26 OS=Arabidopsis thaliana GN=EXPA26 PE=3 SV=2) HSP 1 Score: 153.68 bits (387), Expect = 5.974e-37 Identity = 67/122 (54.92%), Postives = 90/122 (73.77%), Query Frame = 2 Query: 2 FDLSQPVFQHIAQYRAGVVPVAYKRVPCGRRGGIRFTINGHSYFNLVLITNVGGAGDVHAVSIKGSRTGWQPMSRNWGQNWQSNTYLNGQSLSFKVTTSDGRTVTSYNVAPASWSFGRTYSG 367 FDLS +F IA+Y+AGVVPV Y+R+PC + GG++F G+ YF +VLI NVGGAGD+ V +K ++TGW M +NWGQNW ++T L GQ LSF+VTT+DG T +NV P +W FG+T+ G Sbjct: 154 FDLSLAMFLKIAKYKAGVVPVRYRRIPCSKTGGVKFETKGNPYFLMVLIYNVGGAGDIKYVQVKENKTGWITMKKNWGQNWTTSTVLTGQGLSFRVTTTDGITKDFWNVMPKNWGFGQTFDG 275
BLAST of DN620945 vs. ExPASy Swiss-Prot
Match: EXP10_ORYSJ (Expansin-A10 OS=Oryza sativa subsp. japonica GN=EXPA10 PE=2 SV=2) HSP 1 Score: 152.91 bits (385), Expect = 1.019e-36 Identity = 67/118 (56.78%), Postives = 89/118 (75.42%), Query Frame = 2 Query: 23 FQHIAQYRAGVVPVAYKRVPCGRRGGIRFTINGHSYFNLVLITNVGGAGDVHAVSIKGSRTGWQPMSRNWGQNWQSNTYLNGQSLSFKVTTSDGRTVTSYNVAPASWSFGRTYSGAQF 376 F+ IA ++AGV+P+ Y+RV C R GG+RF + G S+F VLI+NVGGAGDV +V IKG+ +GW M RNWGQ W N+ GQ LSF++T+SDG+T+T+YNV P W FG+TY+G QF Sbjct: 138 FEKIALWKAGVMPIQYRRVNCLRDGGVRFAVAGRSFFLTVLISNVGGAGDVRSVKIKGTESGWLSMGRNWGQIWHINSDFRGQPLSFELTSSDGKTLTNYNVVPKEWDFGKTYTGKQF 255
BLAST of DN620945 vs. ExPASy Swiss-Prot
Match: EXP13_ARATH (Expansin-A13 OS=Arabidopsis thaliana GN=EXPA13 PE=2 SV=2) HSP 1 Score: 152.525 bits (384), Expect = 1.331e-36 Identity = 70/125 (56.00%), Postives = 91/125 (72.80%), Query Frame = 2 Query: 2 FDLSQPVFQHIAQYRAGVVPVAYKRVPCGRRGGIRFTINGHSYFNLVLITNVGGAGDVHAVSIKGSRTGWQPMSRNWGQNWQSNTYLNGQSLSFKVTTSDGRTVTSYNVAPASWSFGRTYSGAQF 376 F L F+ IA ++AG +PV Y+R+ C + G +RFT++G F VLITNV G+GD+ AV IKGSRTGW PM RNWGQNW N L Q+LSF+VT+SD TVTSYNV+P +W++G+T+ G QF Sbjct: 139 FVLPIEAFEKIAIWKAGNMPVQYRRINCRKEGSMRFTVDGGGIFISVLITNVAGSGDIAAVKIKGSRTGWLPMGRNWGQNWHINADLRNQALSFEVTSSDRSTVTSYNVSPKNWNYGQTFEGKQF 263
BLAST of DN620945 vs. ExPASy Swiss-Prot
Match: EXP23_ORYSJ (Expansin-A23 OS=Oryza sativa subsp. japonica GN=EXPA23.1 PE=2 SV=2) HSP 1 Score: 151.754 bits (382), Expect = 2.270e-36 Identity = 67/128 (52.34%), Postives = 90/128 (70.31%), Query Frame = 2 Query: 2 FDLSQPVFQHIAQYRAGVVPVAYKRVPCGRRGGIRFTINGHSYFNLVLITNVGGAGDVHAVSIKGSRTG-WQPMSRNWGQNWQSNTYLNGQSLSFKVTTSDGRTVTSYNVAPASWSFGRTY-SGAQFR 379 FD++QP ++ I Y AG++PV Y+RVPC ++GG+RFTINGH YF LVL+TNV AG + ++ + GS T W PM+RNWG W S YL GQ LSF+VT +D +T+ NV P W FG+T+ S QF+ Sbjct: 140 FDMAQPAWEKIGVYSAGIIPVIYQRVPCVKKGGLRFTINGHDYFQLVLVTNVAAAGSIKSMEVMGSNTADWMPMARNWGAQWHSLAYLTGQGLSFRVTNTDDQTLVFTNVVPPGWKFGQTFASKLQFK 267 The following BLAST results are available for this feature:
BLAST of DN620945 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 63
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Sequences
The
following sequences are available for this feature:
EST sequence >DN620945 ID=DN620945; Name=DN620945; organism=Citrus sinensis; type=EST; length=570bpback to top |