DN620945
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DN620945 vs. ExPASy Swiss-Prot
Match: EXP25_ARATH (Expansin-A25 OS=Arabidopsis thaliana GN=EXPA25 PE=2 SV=2) HSP 1 Score: 150.984 bits (380), Expect = 3.872e-36 Identity = 66/122 (54.10%), Postives = 86/122 (70.49%), Query Frame = 2 Query: 2 FDLSQPVFQHIAQYRAGVVPVAYKRVPCGRRGGIRFTINGHSYFNLVLITNVGGAGDVHAVSIKGSRTGWQPMSRNWGQNWQSNTYLNGQSLSFKVTTSDGRTVTSYNVAPASWSFGRTYSG 367 FDLS P+F IAQY+AGVVPV Y+R+ C R GG++F G+ YF ++L NVGGAGD+ + +KG +TGW M +NWGQNW + L GQ +SF+VTTSDG T NV P +W FG+T+ G Sbjct: 151 FDLSLPMFLKIAQYKAGVVPVKYRRISCARTGGVKFETKGNPYFLMILPYNVGGAGDIKLMQVKGDKTGWITMQKNWGQNWTTGVNLTGQGISFRVTTSDGVTKDFNNVMPNNWGFGQTFDG 272
BLAST of DN620945 vs. ExPASy Swiss-Prot
Match: EXP23_ARATH (Expansin-A23 OS=Arabidopsis thaliana GN=EXPA23 PE=2 SV=2) HSP 1 Score: 150.984 bits (380), Expect = 3.872e-36 Identity = 66/122 (54.10%), Postives = 86/122 (70.49%), Query Frame = 2 Query: 2 FDLSQPVFQHIAQYRAGVVPVAYKRVPCGRRGGIRFTINGHSYFNLVLITNVGGAGDVHAVSIKGSRTGWQPMSRNWGQNWQSNTYLNGQSLSFKVTTSDGRTVTSYNVAPASWSFGRTYSG 367 FDLS P+F IAQY+AGVVPV Y+R+ C R GG++F G+ YF ++L NVGGAGD+ + +KG +TGW M +NWGQNW + L GQ +SF+VTTSDG T NV P +W FG+T+ G Sbjct: 144 FDLSLPMFLKIAQYKAGVVPVKYRRISCARTGGVKFETKGNPYFLMILPYNVGGAGDIKLMQVKGDKTGWITMQKNWGQNWTTGVNLTGQGISFRVTTSDGVTKDFNNVMPNNWGFGQTFDG 265
BLAST of DN620945 vs. ExPASy Swiss-Prot
Match: EXP18_ORYSJ (Expansin-A18 OS=Oryza sativa subsp. japonica GN=EXPA18 PE=2 SV=2) HSP 1 Score: 150.599 bits (379), Expect = 5.057e-36 Identity = 67/124 (54.03%), Postives = 92/124 (74.19%), Query Frame = 2 Query: 2 FDLSQPVFQHIAQYRAGVVPVAYKRVPCGRRGGIRFTINGHSYFNLVLITNVGGAGDVHAVSIKGSRTGWQPMSRNWGQNWQSNTYLNGQSLSFKVTTSDGRTVTSYNVAPASWSFGRTYSGAQ 373 FD+SQP +++I Y AG+VP+ Y++V C R GG+RFTI G +YF LVL+TN+ G+G + ++S+KGS TGW MSRNWG NWQ L GQ+LSF VT++ G+T+ +V PA WSFG+T+S Q Sbjct: 122 FDMSQPAWENIGIYSAGIVPILYQQVKCWRSGGVRFTITGLNYFELVLVTNMAGSGSIASMSVKGSSTGWIQMSRNWGANWQCLAGLAGQALSFTVTSTGGQTIVFDSVVPAGWSFGQTFSTYQ 245
BLAST of DN620945 vs. ExPASy Swiss-Prot
Match: EXP13_ORYSJ (Expansin-A13 OS=Oryza sativa subsp. japonica GN=EXPA13 PE=2 SV=2) HSP 1 Score: 150.599 bits (379), Expect = 5.057e-36 Identity = 67/128 (52.34%), Postives = 91/128 (71.09%), Query Frame = 2 Query: 2 FDLSQPVFQHIAQYRAGVVPVAYKRVPCGRRGGIRFTINGHSYFNLVLITNVGGAGDVHAVSIKGSRT-GWQPMSRNWGQNWQSNTYLNGQSLSFKVTTSDGRTVTSYNVAPASWSFGRTY-SGAQFR 379 FD++QP ++ I YR G++PV Y+RVPC ++GG+RFTINGH YF LVL+TNVG AG + A+ +KGS++ W M+ NWG W S YL GQ LSF+VT +DG+T+ NV W FG+T+ S QF+ Sbjct: 135 FDMAQPAWEKIGIYRGGIIPVIYQRVPCMKKGGVRFTINGHDYFQLVLLTNVGAAGSIKAMDVKGSKSPDWMAMAHNWGAQWHSLAYLTGQGLSFRVTITDGQTLVFPNVVRPGWRFGQTFASNIQFK 262
BLAST of DN620945 vs. ExPASy Swiss-Prot
Match: EXPA7_ARATH (Expansin-A7 OS=Arabidopsis thaliana GN=EXPA7 PE=2 SV=1) HSP 1 Score: 150.214 bits (378), Expect = 6.605e-36 Identity = 69/128 (53.91%), Postives = 99/128 (77.34%), Query Frame = 2 Query: 2 FDLSQPVFQHIAQYRAGVVPVAYKRVPCGRRGGIRFTINGHSYFNLVLITNVGGAGDVHAVSIKGSRTGWQPMSRNWGQNWQSNTYLNGQSLSFKVTT-SDGRTVTSYNVAPASWSFGRTY-SGAQFR 379 FD+++P F +A +RAG++PVAY+RVPC R GG+RF G+SY+ L+ + NVGGAGD+ ++++KGSRT W MS NWG ++Q+ + L GQSLSF+VT+ + G T+ ++NVAPA+WS G+TY S A FR Sbjct: 135 FDMAKPAFMKLAYWRAGIIPVAYRRVPCQRSGGMRFQFQGNSYWLLIFVMNVGGAGDIKSMAVKGSRTNWISMSHNWGASYQAFSSLYGQSLSFRVTSYTTGETIYAWNVAPANWSGGKTYKSTANFR 262
BLAST of DN620945 vs. ExPASy Swiss-Prot
Match: EXP31_ORYSJ (Expansin-A31 OS=Oryza sativa subsp. japonica GN=EXPA31 PE=2 SV=2) HSP 1 Score: 150.214 bits (378), Expect = 6.605e-36 Identity = 71/124 (57.26%), Postives = 91/124 (73.39%), Query Frame = 2 Query: 2 FDLSQPVFQHIAQYRAGVVPVAYKRVPCGRRGGIRFTINGHSYFNLVLITNVGGAGDVHAVSIKGSRTGWQPMSRNWGQNWQSNTYLNGQSLSFKVTTSDGRTVTSYNVAPASWSFGRTYSGAQ 373 FD+SQP ++ I Y+AG+VPV Y+RV C R+GG+RFT+ G +YF LVLITNV G+G V + IKG+ TGW MSRNWG NWQS L GQ+LSF VTT+ G+ + +VAPA W FG+T+S Q Sbjct: 129 FDMSQPAWEQIGVYQAGIVPVLYQRVRCWRQGGVRFTVAGLNYFELVLITNVAGSGSVASAWIKGTNTGWIQMSRNWGANWQSLAGLAGQALSFAVTTTGGQYLQFQDVAPAWWQFGQTFSTYQ 252
BLAST of DN620945 vs. ExPASy Swiss-Prot
Match: EXP19_ORYSJ (Expansin-A19 OS=Oryza sativa subsp. japonica GN=EXPA19 PE=2 SV=1) HSP 1 Score: 149.828 bits (377), Expect = 8.626e-36 Identity = 64/121 (52.89%), Postives = 91/121 (75.21%), Query Frame = 2 Query: 2 FDLSQPVFQHIAQYRAGVVPVAYKRVPCGRRGGIRFTINGHSYFNLVLITNVGGAGDVHAVSIKGSRTGWQPMSRNWGQNWQSNTYLNGQSLSFKVTTSDGRTVTSYNVAPASWSFGRTYS 364 FD+SQP +++I Y AG++P+ Y++V C R GG+RFTING +YF LVL+TN+ G+G + ++S+KGS TGW M+RNWG NWQ L GQ+LSF VT++ G+T+ + PA WSFG+T+S Sbjct: 122 FDMSQPAWENIGIYNAGIIPILYQQVKCWRYGGVRFTINGFNYFELVLVTNMAGSGSIASMSVKGSCTGWIQMTRNWGANWQCLAGLAGQALSFNVTSTGGQTIVFDDAVPAGWSFGQTFS 242
BLAST of DN620945 vs. ExPASy Swiss-Prot
Match: EXP16_ORYSJ (Expansin-A16 OS=Oryza sativa subsp. japonica GN=EXPA16 PE=2 SV=1) HSP 1 Score: 149.443 bits (376), Expect = 1.127e-35 Identity = 69/125 (55.20%), Postives = 88/125 (70.40%), Query Frame = 2 Query: 2 FDLSQPVFQHIAQYRAGVVPVAYKRVPCGRRGGIRFTINGHSYFNLVLITNVGGAGDVHAVSIKGSRTGWQPMSRNWGQNWQSNTYLNGQSLSFKVTTSDGRTVTSYNVAPASWSFGRTYSGAQF 376 F++S+ F +A+ +A +VPV ++RV C R GG+RFTI G + F VLITNV G+V AV +KGSRTGW PM RNWGQNWQ + L GQ LSF+VT GRTV +Y+VAP W F +T+ G QF Sbjct: 134 FEMSEAAFLRVAKAKADIVPVQFRRVSCDRAGGMRFTITGGASFLQVLITNVAADGEVAAVKVKGSRTGWIPMGRNWGQNWQCDADLRGQPLSFEVTGGRGRTVVAYSVAPPDWMFAQTFEGKQF 258
BLAST of DN620945 vs. ExPASy Swiss-Prot
Match: EXP25_ORYSJ (Expansin-A25 OS=Oryza sativa subsp. japonica GN=EXPA25 PE=2 SV=2) HSP 1 Score: 149.058 bits (375), Expect = 1.471e-35 Identity = 64/124 (51.61%), Postives = 93/124 (75.00%), Query Frame = 2 Query: 2 FDLSQPVFQHIAQYRAGVVPVAYKRVPCGRRGGIRFTINGHSYFNLVLITNVGGAGDVHAVSIKGSRTGWQPMSRNWGQNWQSNTYLNGQSLSFKVTTSDGRTVTSYNVAPASWSFGRTYSGAQ 373 FD+++P + I Y+AG++PV Y++V C R+GGIRFT+ G ++F LVL++NV G+G V +VS+KG TGW ++RNWG NWQ N+ L GQ+LSF VT++ G+T+ YNV P+ WSFG T++ Q Sbjct: 128 FDMAEPAWLQIGIYKAGIIPVLYQQVKCWRQGGIRFTMGGFNFFELVLVSNVAGSGSVRSVSVKGGSTGWITLNRNWGANWQCNSGLVGQALSFAVTSTGGQTLYIYNVVPSWWSFGMTFTSNQ 251
BLAST of DN620945 vs. ExPASy Swiss-Prot
Match: EXP20_ARATH (Expansin-A20 OS=Arabidopsis thaliana GN=EXPA20 PE=2 SV=1) HSP 1 Score: 149.058 bits (375), Expect = 1.471e-35 Identity = 69/124 (55.65%), Postives = 89/124 (71.77%), Query Frame = 2 Query: 5 DLSQPVFQHIAQYRAGVVPVAYKRVPCGRRGGIRFTINGHSYFNLVLITNVGGAGDVHAVSIKGSRTGWQPMSRNWGQNWQSNTYLNGQSLSFKVTTSDGRTVTSYNVAPASWSFGRTYSGAQF 376 +LS F IA+ RA ++P+ Y+RV CGRRGG+RF+++G S+F VLI+NVG G+V V +KG T W PM+RNWGQNW S+ L GQSLSF+VT G+T+ SY+VAP W FG TY G QF Sbjct: 131 ELSHAAFTGIAETRAEMIPIQYRRVKCGRRGGLRFSLSGSSHFFQVLISNVGLDGEVVGVKVKGHTTAWIPMARNWGQNWHSSLDLIGQSLSFEVTLKGGKTIASYDVAPPYWRFGMTYQGKQF 254 The following BLAST results are available for this feature:
BLAST of DN620945 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 63
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Sequences
The
following sequences are available for this feature:
EST sequence >DN620945 ID=DN620945; Name=DN620945; organism=Citrus sinensis; type=EST; length=570bpback to top |