DN620945
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DN620945 vs. ExPASy Swiss-Prot
Match: EXPB5_ORYSJ (Expansin-B5 OS=Oryza sativa subsp. japonica GN=EXPB5 PE=2 SV=2) HSP 1 Score: 71.2478 bits (173), Expect = 3.899e-12 Identity = 42/134 (31.34%), Postives = 66/134 (49.25%), Query Frame = 2 Query: 2 FDLSQPVFQHIAQY-------RAGVVPVAYKRVPCGRRGGIRFTINGHS--YFNLVLITNVGGAGDVHAVSIKGSR--TGWQPMSRNWGQNWQSNTYLN---GQSLSFKVTTSDGRTVTSYNVAPASWSFGRTY 361 FD+S F +A AGV+ + YKRVPC + F ++ S Y+ +L+ G GD+ AV I +R GW+ M ++WG W+ N+ S ++T+ G+ + + NV P+ W G TY Sbjct: 134 FDMSGTAFGAMANRGMGDRLRSAGVLKIQYKRVPCRFAMNVAFKVDAGSNPYYLAILVQYANGDGDLAAVHIMEARGGGGWKAMQQSWGATWRLNSNTGKPLSPPFSIRLTSGSGKVLVANNVIPSGWQAGLTY 267
BLAST of DN620945 vs. ExPASy Swiss-Prot
Match: EXB14_ORYSJ (Putative expansin-B14 OS=Oryza sativa subsp. japonica GN=EXPB14 PE=3 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 1.482e-11 Identity = 46/140 (32.86%), Postives = 67/140 (47.86%), Query Frame = 2 Query: 2 FDLSQPVFQHIAQ-------YRAGVVPVAYKRVPCGRRG---GIRFTINGHSYFNLVLITNVGGAGDVHAVSI-----KGSRTGWQPMSRNWGQNWQSNTYLNGQS-----LSFKVTTSDGRTVTSYNVAPASWSFGRTY 361 FDLS F +A+ AG +PV Y RVPC +G R + Y+ VL+ + G GD+ AV + G W M ++WG W+ N+ G + +S ++T+ GRT+ + NV PA W G TY Sbjct: 127 FDLSGTAFGAMAKPGQDDQLRNAGKLPVQYARVPCKWQGVDIAFRVDAGSNQYYLAVLVEDEDGDGDLSAVDLMQSGGSGGGGSWAAMQQSWGAVWKYNS---GPAPLQAPMSIRLTSGSGRTLVASNVIPAGWQPGGTY 263
BLAST of DN620945 vs. ExPASy Swiss-Prot
Match: EXB18_ORYSJ (Expansin-B18 OS=Oryza sativa subsp. japonica GN=EXPB18 PE=2 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 5.630e-11 Identity = 47/136 (34.56%), Postives = 71/136 (52.21%), Query Frame = 2 Query: 2 FDLSQPVFQHIA------QYRA-GVVPVAYKRVPCGRRGGIRFTI-----NGHSYFNLVLITNVGGAGDVHAVSIK--GSRTGWQPMSRNWGQNWQSNTYLNGQS-LSFKVTTSDGRTVTSYNVAPASWSFGRTYS 364 FDLS F +A Q RA GV+ + Y RVPC GG+ T + SYF VL+ G GD+ + + G+ W PM ++WG W+ + Q+ LS ++T+S G+T+ + NV P+ W G +Y+ Sbjct: 126 FDLSGTAFGAMANPGQADQLRAAGVLQIQYNRVPCNW-GGVMLTFAVDAGSNPSYF-AVLVKYENGDGDLSGMDLMQTGAGAAWTPMQQSWGAVWKLSAGAALQAPLSIRLTSSSGKTLVASNVIPSGWKPGASYT 259 The following BLAST results are available for this feature:
BLAST of DN620945 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 63
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Sequences
The
following sequences are available for this feature:
EST sequence >DN620945 ID=DN620945; Name=DN620945; organism=Citrus sinensis; type=EST; length=570bpback to top |