DN620944
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DN620944 vs. ExPASy Swiss-Prot
Match: EXPA1_ORYSJ (Expansin-A1 OS=Oryza sativa subsp. japonica GN=EXPA1 PE=2 SV=2) HSP 1 Score: 107.071 bits (266), Expect = 1.118e-22 Identity = 47/67 (70.15%), Postives = 58/67 (86.57%), Query Frame = -2 Query: 562 VHAVSIKGSRTGWQPMSRNWGQNWQSNTYLNGQSLSFKVTTSDGRTVTSYNVAPASWSFGRTYSGAQ 762 + +VSIKGSRTGW MSRNWG NWQSN YL+GQSLSFKVT+SDG+T+T +VAPA W+FG+T+S +Q Sbjct: 192 IQSVSIKGSRTGWMAMSRNWGVNWQSNAYLDGQSLSFKVTSSDGQTLTFLDVAPAGWTFGQTFSTSQ 258
BLAST of DN620944 vs. ExPASy Swiss-Prot
Match: EXP11_ORYSJ (Expansin-A11 OS=Oryza sativa subsp. japonica GN=EXPA11 PE=2 SV=2) HSP 1 Score: 107.071 bits (266), Expect = 1.118e-22 Identity = 48/68 (70.59%), Postives = 56/68 (82.35%), Query Frame = -2 Query: 559 VHAVSIKGSRTGWQPMSRNWGQNWQSNTYLNGQSLSFKVTTSDGRTVTSYNVAPASWSFGRTYSGAQF 762 V AVS+KGSR+GWQ MS NWG NWQ+ L+GQ LSF+VT SDGRTVTS NVAP+ WSFG+T+SG QF Sbjct: 181 VTAVSVKGSRSGWQAMSHNWGANWQNGANLDGQPLSFRVTASDGRTVTSDNVAPSGWSFGQTFSGGQF 248
BLAST of DN620944 vs. ExPASy Swiss-Prot
Match: EXPA3_ARATH (Expansin-A3 OS=Arabidopsis thaliana GN=EXPA3 PE=2 SV=1) HSP 1 Score: 103.99 bits (258), Expect = 9.461e-22 Identity = 46/69 (66.67%), Postives = 56/69 (81.16%), Query Frame = -2 Query: 556 VHAVSIKGSRTGWQPMSRNWGQNWQSNTYLNGQSLSFKVTTSDGRTVTSYNVAPASWSFGRTYSGAQFR 762 ++ VS+KGS+T W MSRNWGQNWQSN L GQSLSF+VT SD R+ TS+NVAPA+W FG+T+SG FR Sbjct: 193 INGVSVKGSKTDWVRMSRNWGQNWQSNAVLIGQSLSFRVTASDRRSSTSWNVAPATWQFGQTFSGKNFR 261
BLAST of DN620944 vs. ExPASy Swiss-Prot
Match: EXPA9_ARATH (Expansin-A9 OS=Arabidopsis thaliana GN=EXPA9 PE=2 SV=1) HSP 1 Score: 101.679 bits (252), Expect = 4.695e-21 Identity = 45/66 (68.18%), Postives = 53/66 (80.30%), Query Frame = -2 Query: 556 VSIKGSRTGWQPMSRNWGQNWQSNTYLNGQSLSFKVTTSDGRTVTSYNVAPASWSFGRTYSGAQFR 753 VS+KGS T W +SRNWGQNWQSN L GQSLSF+V TSDGR+ TS N+AP++W FG+TYSG FR Sbjct: 192 VSVKGSNTQWLDLSRNWGQNWQSNALLVGQSLSFRVKTSDGRSSTSNNIAPSNWQFGQTYSGKNFR 257
BLAST of DN620944 vs. ExPASy Swiss-Prot
Match: EXPA7_ORYSJ (Expansin-A7 OS=Oryza sativa subsp. japonica GN=EXPA7 PE=2 SV=1) HSP 1 Score: 101.679 bits (252), Expect = 4.695e-21 Identity = 44/65 (67.69%), Postives = 52/65 (80.00%), Query Frame = -2 Query: 556 SIKGSRTGWQPMSRNWGQNWQSNTYLNGQSLSFKVTTSDGRTVTSYNVAPASWSFGRTYSGAQFR 750 S+KG+ TGW PMSRNWGQNWQSN+ L GQ+LSF+VT SD RT TS+N APA W FG+T+ G FR Sbjct: 199 SVKGTSTGWMPMSRNWGQNWQSNSVLVGQALSFRVTGSDRRTSTSWNAAPAGWHFGQTFEGKNFR 263
BLAST of DN620944 vs. ExPASy Swiss-Prot
Match: EXP16_ARATH (Expansin-A16 OS=Arabidopsis thaliana GN=EXPA16 PE=2 SV=1) HSP 1 Score: 100.523 bits (249), Expect = 1.046e-20 Identity = 42/65 (64.62%), Postives = 54/65 (83.08%), Query Frame = -2 Query: 556 SIKGSRTGWQPMSRNWGQNWQSNTYLNGQSLSFKVTTSDGRTVTSYNVAPASWSFGRTYSGAQFR 750 S+KGS+TGW ++RNWGQNWQSN L GQSLSF+VT+SD RT TS+N+AP++W FG+T+ G FR Sbjct: 195 SVKGSKTGWMSLTRNWGQNWQSNAVLVGQSLSFRVTSSDRRTSTSWNIAPSNWQFGQTFVGKNFR 259
BLAST of DN620944 vs. ExPASy Swiss-Prot
Match: EXP13_ARATH (Expansin-A13 OS=Arabidopsis thaliana GN=EXPA13 PE=2 SV=2) HSP 1 Score: 99.7525 bits (247), Expect = 1.784e-20 Identity = 43/68 (63.24%), Postives = 53/68 (77.94%), Query Frame = -2 Query: 559 VHAVSIKGSRTGWQPMSRNWGQNWQSNTYLNGQSLSFKVTTSDGRTVTSYNVAPASWSFGRTYSGAQF 762 + AV IKGSRTGW PM RNWGQNW N L Q+LSF+VT+SD TVTSYNV+P +W++G+T+ G QF Sbjct: 196 IAAVKIKGSRTGWLPMGRNWGQNWHINADLRNQALSFEVTSSDRSTVTSYNVSPKNWNYGQTFEGKQF 263
BLAST of DN620944 vs. ExPASy Swiss-Prot
Match: EXPA6_ORYSJ (Expansin-A6 OS=Oryza sativa subsp. japonica GN=EXPA6 PE=2 SV=1) HSP 1 Score: 98.5969 bits (244), Expect = 3.975e-20 Identity = 43/74 (58.11%), Postives = 57/74 (77.03%), Query Frame = -2 Query: 559 VHAVSIKGSRTG------WQPMSRNWGQNWQSNTYLNGQSLSFKVTTSDGRTVTSYNVAPASWSFGRTYSGAQF 762 V ++++KGS +G WQPMSRNWGQNWQSN YL+G++LSF+VT DGR++T +VAPA W FG+T+ G QF Sbjct: 186 VRSLAVKGSGSGSRVGGRWQPMSRNWGQNWQSNAYLDGKALSFRVTAGDGRSLTCADVAPAGWQFGQTFEGRQF 259
BLAST of DN620944 vs. ExPASy Swiss-Prot
Match: EXPA5_ORYSJ (Expansin-A5 OS=Oryza sativa subsp. japonica GN=EXPA5 PE=2 SV=1) HSP 1 Score: 98.5969 bits (244), Expect = 3.975e-20 Identity = 44/69 (63.77%), Postives = 54/69 (78.26%), Query Frame = -2 Query: 559 VHAVSIKGSRTG-WQPMSRNWGQNWQSNTYLNGQSLSFKVTTSDGRTVTSYNVAPASWSFGRTYSGAQF 762 VHAV++K R+ WQ +SRNWGQNWQS L+GQ+LSF+VTT DGR+V S N P WSFG+T+SGAQF Sbjct: 222 VHAVAVKSERSAAWQALSRNWGQNWQSAALLDGQALSFRVTTGDGRSVVSNNAVPRGWSFGQTFSGAQF 290
BLAST of DN620944 vs. ExPASy Swiss-Prot
Match: EXPA4_ARATH (Expansin-A4 OS=Arabidopsis thaliana GN=EXPA4 PE=1 SV=1) HSP 1 Score: 98.2117 bits (243), Expect = 5.191e-20 Identity = 42/65 (64.62%), Postives = 52/65 (80.00%), Query Frame = -2 Query: 556 SIKGSRTGWQPMSRNWGQNWQSNTYLNGQSLSFKVTTSDGRTVTSYNVAPASWSFGRTYSGAQFR 750 S+KGSRTGW +SRNWGQNWQSN L GQ+LSF+VT SD RT TS+N+ P++W FG+T+ G FR Sbjct: 192 SVKGSRTGWMSLSRNWGQNWQSNAVLVGQALSFRVTGSDRRTSTSWNMVPSNWQFGQTFVGKNFR 256 The following BLAST results are available for this feature:
BLAST of DN620944 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 55
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Sequences
The
following sequences are available for this feature:
EST sequence >DN620944 ID=DN620944; Name=DN620944; organism=Citrus sinensis; type=EST; length=763bpback to top |