FC922050
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC922050 vs. ExPASy Swiss-Prot
Match: TAF5_YEAST (Transcription initiation factor TFIID subunit 5 OS=Saccharomyces cerevisiae GN=TAF5 PE=1 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 2.352e-12 Identity = 38/102 (37.25%), Postives = 53/102 (51.96%), Query Frame = 1 Query: 250 LQAHNGYILKCLLSPEFCEPHRYLATASSDHTVKIWNVDGFTLEKTLIGHQRWVWDCVFSVDGAYLITASSDATARLWSMSTGEDIRVYQGHHKATICCALH 555 L H+G + SP+ ++YL + S D TV++W++D T + GH VWD FS G Y TAS D TARLWS +R++ GH C + H Sbjct: 521 LVGHSGTVYSTSFSPD----NKYLLSGSEDKTVRLWSMDTHTALVSYKGHNHPVWDVSFSPLGHYFATASHDQTARLWSCDHIYPLRIFAGHLNDVDCVSFH 618 HSP 2 Score: 72.0182 bits (175), Expect = 4.012e-12 Identity = 57/212 (26.89%), Postives = 89/212 (41.98%), Query Frame = 1 Query: 37 SGDQNGNIRVWDLTANSCS----------------CELVPEVDTAVRSLTVMWDGSLVVAANNHGTCYVWRLMRGTQTMTNFEPLHKLQAHNGYILKCLLSPEFCEPHRYLATASSDHTVKIWNVDGFTLEKTLIGHQRWVWDCV-FSVDGAYLITASSDATARLWSMSTGEDIRVYQGHHKATICCAL-HDGAEPSAS*TXNLTSAWIKGT 618 +G Q+ I++W L +S + C+ + V S + D +++ + T +W +M L + HN + SP Y ATAS D T ++W+ D + GH V DCV F +G Y+ T SSD T R+W +STG+ +R++ GH I A+ DG S + + W GT Sbjct: 483 AGFQDSYIKIWSLDGSSLNNPNIALNNNDKDEDPTCKTLVGHSGTVYSTSFSPDNKYLLSGSEDKTVRLW-------SMDTHTALVSYKGHNHPVWDVSFSPL----GHYFATASHDQTARLWSCDHIYPLRIFAGHLNDV-DCVSFHPNGCYVFTGSSDKTCRMWDVSTGDSVRLFLGHTAPVISIAVCPDGRWLSTGSEDGIINVWDIGT 682
BLAST of FC922050 vs. ExPASy Swiss-Prot
Match: TAF5_SCHPO (Transcription initiation factor TFIID subunit 5 OS=Schizosaccharomyces pombe GN=taf5 PE=1 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 2.352e-12 Identity = 59/215 (27.44%), Postives = 92/215 (42.79%), Query Frame = 1 Query: 16 PNQTELISGDQNGNIRVWDLTANSCSCEL---VPEVDTAVRSL---------TVMWDGSLVVAANNHGTCYVWRLMRGTQTMTNFEPLHKLQAHNGYILKCLLSPEFCEPHRYLATASSDHTVKIWNVDGFTLEKTLIGHQRWVWDCV-FSVDGAYLITASSDATARLWSMSTGEDIRVYQGHHKATICCAL-HDGAEPSAS*TXNLTSAWIKGT 618 P+ T + G Q IR+W + A+ S V + D +VR L T D +++ + + +W + T + + H G + P Y ATAS D T ++W+ D + GH V DCV F + AY++T SSD T RLW + G +RV+ GH + A+ DG +++ + L W GT Sbjct: 334 PDSTMIACGFQESYIRLWSIKADKKSLPKSTSVEDSDGSVRLLSHSGPVYGTTFSPDNKYLLSCSEDASARLWSVDTKTALVA-------YKGHTGPVWDVAFGPF----GHYFATASHDQTAQLWSCDHIYPLRVFAGHLSDV-DCVTFHPNSAYVLTGSSDKTCRLWDVHRGHSVRVFNGHTQPVTAVAIAPDGHTMASADSEGLIHLWDIGT 536
BLAST of FC922050 vs. ExPASy Swiss-Prot
Match: FBXW7_DROME (F-box/WD repeat-containing protein 7 OS=Drosophila melanogaster GN=ago PE=1 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 2.352e-12 Identity = 50/181 (27.62%), Postives = 90/181 (49.72%), Query Frame = 1 Query: 10 LHPNQTELISGDQNGNIRVWDLTANSCSCELVPEVDTAVRSLTVMWDGSLVVAANNHGTCYVWRLMRGTQTMTNFEPLHKLQAHNGYILKCLLSPEFCEPHRYLATASSDHTVKIWNVDGFTLEKTLIGHQRWVWDCVFSVDGAYLITASSDATARLWSMSTGEDIRVYQG---HHKATIC 543 +H + ++++SG ++ +RVWD+ SC LV + AVR V +DG L+V+ +W R E LH LQ H + S +F H + + S D ++++W+V+ + TL+GHQ + L++ ++D+T ++W ++TG+ ++ G HH A C Sbjct: 1081 MHLHGSKVVSGSRDATLRVWDIEQGSCLHVLVGHL-AAVR--CVQYDGKLIVSGAYDYMVKIWHPERQ-------ECLHTLQGHTNRV----YSLQFDGLH--VVSGSLDTSIRVWDVETGNCKHTLMGHQSLT--SGMELRQNILVSGNADSTVKVWDITTGQCLQTLSGPNKHHSAVTC 1243
BLAST of FC922050 vs. ExPASy Swiss-Prot
Match: WDR69_XENLA (WD repeat-containing protein 69 OS=Xenopus laevis GN=wdr69 PE=2 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 3.072e-12 Identity = 48/175 (27.43%), Postives = 80/175 (45.71%), Query Frame = 1 Query: 31 LISGDQNGNIRVWDLTANSCSCELVPEVDTAVRSLTVMWDGSLVVAANNHGTCYVWRLMRGTQTMTNFEPLHKLQAHNGYILKCLLSPEFCEPHRYLATASSDHTVKIWNVDGFTLEKTLIGHQRWVWDCVFSVDGAYLITASSDATARLWSMSTGEDIRVYQGHHKATICCALH 555 LI+G + + VW++ + L+ + S WD SL+ A+ +C +W + G T L H+ +L F + +ATAS+D T ++++ L GH+ + F+ G ++TASSD T+RLW TGE ++V +GH CA + Sbjct: 234 LITGSFDHTVSVWEIPSGRRIHTLIGHRGE-ISSAQFNWDCSLIATASMDKSCKLWDSLNGKCVAT-------LTGHDDEVLDVT----FDSTGQLVATASADGTARVYSASSRKCLAKLEGHEGEISKICFNAQGNRIVTASSDKTSRLWDPHTGECLQVLKGHTDEIFSCAFN 396
BLAST of FC922050 vs. ExPASy Swiss-Prot
Match: GBLP_LEIMA (Guanine nucleotide-binding protein subunit beta-like protein OS=Leishmania major PE=2 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 3.072e-12 Identity = 44/153 (28.76%), Postives = 69/153 (45.10%), Query Frame = 1 Query: 55 NIRVWDLTANSCSCELVPEVDTAVRSLTVMWDGSLVVAANNHGTCYVWRLMRGTQTMTNFEPLHKL--QAHNGYILKCLLSPEFCEPHRYLATASSDHTVKIWNVDGFTLEKTLIGHQRWVWDCVFSVDGAYLITASSDATARLWSMSTGEDI 507 +IR+WDL C + + V ++ D L+V+A VW + E +H+ H ++ SP H + + S D+T+K+WNV+G E+TL GH +V S DG+ + D A LW +STGE + Sbjct: 88 SIRMWDLRNGQCQRKFLKHTKD-VLAVAFSPDDRLIVSAGRDNVIRVWNVAG--------ECMHEFLRDGHEDWVSSICFSPSL--EHPIVVSGSWDNTIKVWNVNGGKCERTLKGHSNYVSTVTVSPDGSLCASGGKDGAALLWDLSTGEQL 229
BLAST of FC922050 vs. ExPASy Swiss-Prot
Match: GBLP_LEIIN (Guanine nucleotide-binding protein subunit beta-like protein OS=Leishmania infantum PE=2 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 3.072e-12 Identity = 44/153 (28.76%), Postives = 69/153 (45.10%), Query Frame = 1 Query: 55 NIRVWDLTANSCSCELVPEVDTAVRSLTVMWDGSLVVAANNHGTCYVWRLMRGTQTMTNFEPLHKL--QAHNGYILKCLLSPEFCEPHRYLATASSDHTVKIWNVDGFTLEKTLIGHQRWVWDCVFSVDGAYLITASSDATARLWSMSTGEDI 507 +IR+WDL C + + V ++ D L+V+A VW + E +H+ H ++ SP H + + S D+T+K+WNV+G E+TL GH +V S DG+ + D A LW +STGE + Sbjct: 88 SIRMWDLRNGQCQRKFLKHTKD-VLAVAFSPDDRLIVSAGRDNVIRVWNVAG--------ECMHEFLRDGHEDWVSSICFSPSL--EHPIVVSGSWDNTIKVWNVNGGKCERTLKGHSNYVSTVTVSPDGSLCASGGKDGAALLWDLSTGEQL 229
BLAST of FC922050 vs. ExPASy Swiss-Prot
Match: GBLP_LEICH (Guanine nucleotide-binding protein subunit beta-like protein OS=Leishmania chagasi PE=2 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 3.072e-12 Identity = 44/153 (28.76%), Postives = 69/153 (45.10%), Query Frame = 1 Query: 55 NIRVWDLTANSCSCELVPEVDTAVRSLTVMWDGSLVVAANNHGTCYVWRLMRGTQTMTNFEPLHKL--QAHNGYILKCLLSPEFCEPHRYLATASSDHTVKIWNVDGFTLEKTLIGHQRWVWDCVFSVDGAYLITASSDATARLWSMSTGEDI 507 +IR+WDL C + + V ++ D L+V+A VW + E +H+ H ++ SP H + + S D+T+K+WNV+G E+TL GH +V S DG+ + D A LW +STGE + Sbjct: 88 SIRMWDLRNGQCQRKFLKHTKD-VLAVAFSPDDRLIVSAGRDNVIRVWNVAG--------ECMHEFLRDGHEDWVSSICFSPSL--EHPIVVSGSWDNTIKVWNVNGGKCERTLKGHSNYVSTVTVSPDGSLCASGGKDGAALLWDLSTGEQL 229
BLAST of FC922050 vs. ExPASy Swiss-Prot
Match: WDR69_XENTR (WD repeat-containing protein 69 OS=Xenopus tropicalis GN=wdr69 PE=2 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 4.012e-12 Identity = 48/175 (27.43%), Postives = 80/175 (45.71%), Query Frame = 1 Query: 31 LISGDQNGNIRVWDLTANSCSCELVPEVDTAVRSLTVMWDGSLVVAANNHGTCYVWRLMRGTQTMTNFEPLHKLQAHNGYILKCLLSPEFCEPHRYLATASSDHTVKIWNVDGFTLEKTLIGHQRWVWDCVFSVDGAYLITASSDATARLWSMSTGEDIRVYQGHHKATICCALH 555 LI+G + + VW++ + L+ + S WD SL+ A+ +C +W + G T L H +L F + +ATAS+D T ++++ L GH+ + F+ G ++TASSD T+RLW+ TGE ++V +GH CA + Sbjct: 234 LITGSFDHTVSVWEIPSGRRIHTLIGHRGE-ISSAQFNWDCSLIATASMDKSCKLWDSLNGKCVAT-------LTGHEDEVLDVT----FDSTGQLVATASADGTARVYSASSRKCLAKLEGHEGEISKICFNAQGNRILTASSDKTSRLWNPHTGECLQVLKGHTDEIFSCAFN 396
BLAST of FC922050 vs. ExPASy Swiss-Prot
Match: TG125_CAEEL (WD repeat-containing protein tag-125 OS=Caenorhabditis elegans GN=tag-125 PE=2 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 4.012e-12 Identity = 36/106 (33.96%), Postives = 59/106 (55.66%), Query Frame = 1 Query: 229 NFEPLHKLQAHNGYILKCLLSPEFCEPHRYLATASSDHTVKIWNVDGFTLEKTLIGHQRWVWDCVFSVDGAYLITASSDATARLWSMSTGEDIRVYQGHHKATICC 546 N++ + L+ H K + S +F +YL T+S+D TVKIWN+D E+TL GH+ V D +S D +++AS D T +++ + T + +GH+ CC Sbjct: 76 NYKLMCTLEGHT----KSISSAKFSPCGKYLGTSSADKTVKIWNMDHMICERTLTGHKLGVNDIAWSSDSRCVVSASDDKTLKIFEIVTSRMTKTLKGHNNYVFCC 177
BLAST of FC922050 vs. ExPASy Swiss-Prot
Match: WSB2_MOUSE (WD repeat and SOCS box-containing protein 2 OS=Mus musculus GN=Wsb2 PE=2 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 5.240e-12 Identity = 49/161 (30.43%), Postives = 81/161 (50.31%), Query Frame = 1 Query: 31 LISGDQNGNIRVWDLTANSCSCELVPEVDTAVRSLTVMWDGSLV-VAANNHGTCYVWRLMRGTQTMTNFEPLHKLQAHNGYILKCLLSPEFCEPHRYLATASSDHTVKIWNVDGFTLEKTLIGHQRWVWDCVFSVDGAYLITASSDATARLWSMSTGEDIR 510 L +G +G I++W++ L D VR L+ GSL+ V+A+ T +W L + + + + L H ++ C +SP+ C L +A+ + +V +W++ +TL + L GHQ V C FS D A L+TAS D + +W TG +R Sbjct: 126 LATGLNDGQIKIWEVQTGLLLLNLSGHQDV-VRDLSFTPSGSLILVSASRDKTLRIWDLNK------HGKQIQVLSGHLQWVYCCSISPD-CS---MLCSAAGEKSVFLWSMRSYTLIRKLEGHQSSVVSCDFSPDSALLVTASYDTSVIMWDPYTGARLR 275 The following BLAST results are available for this feature:
BLAST of FC922050 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 90
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Sequences
The
following sequences are available for this feature:
EST sequence >FC922050 ID=FC922050; Name=FC922050; organism=Citrus sinensis; type=EST; length=765bpback to top |