FC922050
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC922050 vs. ExPASy Swiss-Prot
Match: WDR5_XENTR (WD repeat-containing protein 5 OS=Xenopus tropicalis GN=wdr5 PE=2 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 2.601e-11 Identity = 45/185 (24.32%), Postives = 84/185 (45.41%), Query Frame = 1 Query: 13 HPNQTELISGDQNGNIRVWDLTANSCSCELVPEVDTAVRSLTVMWDGSLVVAANNHGTCYVWRLMRGTQTMTNFEPLHKLQAHNGYILKCLLSPEFCEPHRYLATASSDHTVKIWNVDGFTLEKTLIGHQRWVWDCVFS----VDGAYLITASSDATARLWSMSTGEDIRVYQGHHKATICCALH 555 +P ++SG + ++R+WD+ C + +P V ++ DGSL+V+++ G C +W G T + N + SP +Y+ A+ D+T+K+W+ KT H+ + C+F+ G ++++ S D +W++ T E ++ QGH I A H Sbjct: 138 NPQSNLIVSGSFDESVRIWDVKTGKC-LKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDD------DNPPVSFVKFSPN----GKYILAATLDNTLKLWDYSKGKCLKTYTCHKNEKY-CIFANFSVTGGKWIVSGSEDNLVYIWNLQTKEVVQKLQGHTDVVISTACH 310 HSP 2 Score: 67.3958 bits (163), Expect = 9.883e-11 Identity = 30/90 (33.33%), Postives = 51/90 (56.67%), Query Frame = 1 Query: 277 KCLLSPEFCEPHRYLATASSDHTVKIWNVDGFTLEKTLIGHQRWVWDCVFSVDGAYLITASSDATARLWSMSTGEDIRVYQGHHKATICC 546 K + S +F +LA++S+D +KIW EKT+ GH+ + D +S D L++AS D T ++W +S+G+ ++ +GH CC Sbjct: 46 KAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCC 135
BLAST of FC922050 vs. ExPASy Swiss-Prot
Match: WDR5B_PONAB (WD repeat-containing protein 5B OS=Pongo abelii PE=2 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 2.601e-11 Identity = 47/193 (24.35%), Postives = 84/193 (43.52%), Query Frame = 1 Query: 13 HPNQTELISGDQNGNIRVWDLTANSCSCELVPEVDTAVRSLTVMWDGSLVVAANNHGTCYVWRLMRGTQTMTNFEPLHKLQAHNGYILKCLLSPE--------FCEPHRYLATASSDHTVKIWNVDGFTLEKTLIGHQRWVWDCVFS----VDGAYLITASSDATARLWSMSTGEDIRVYQGHHKATICCALH 555 +P +ISG + +++W++ C L D V ++ GSL+V+ + G C +W A +G LK L+ + F +Y+ TA+ D+T+K+W+ KT GH+ + C+F+ G ++++ S D +W++ T E ++ QGH I A H Sbjct: 134 NPPSNLIISGSFDETVKIWEVKTGKCLKTLSAHSDP-VSAVHFNCSGSLIVSGSYDGLCRIW------------------DAASGQCLKTLVDDDNPPVSFVKFSPNGKYILTATLDNTLKLWDYSRGRCLKTYTGHKNEKY-CIFANFSVTGGKWIVSGSEDNLVYIWNLQTKEIVQKLQGHTDVVISAACH 306
BLAST of FC922050 vs. ExPASy Swiss-Prot
Match: WDR5B_HUMAN (WD repeat-containing protein 5B OS=Homo sapiens GN=WDR5B PE=2 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 2.601e-11 Identity = 47/193 (24.35%), Postives = 84/193 (43.52%), Query Frame = 1 Query: 13 HPNQTELISGDQNGNIRVWDLTANSCSCELVPEVDTAVRSLTVMWDGSLVVAANNHGTCYVWRLMRGTQTMTNFEPLHKLQAHNGYILKCLLSPE--------FCEPHRYLATASSDHTVKIWNVDGFTLEKTLIGHQRWVWDCVFS----VDGAYLITASSDATARLWSMSTGEDIRVYQGHHKATICCALH 555 +P +ISG + +++W++ C L D V ++ GSL+V+ + G C +W A +G LK L+ + F +Y+ TA+ D+T+K+W+ KT GH+ + C+F+ G ++++ S D +W++ T E ++ QGH I A H Sbjct: 134 NPPSNLIISGSFDETVKIWEVKTGKCLKTLSAHSDP-VSAVHFNCSGSLIVSGSYDGLCRIW------------------DAASGQCLKTLVDDDNPPVSFVKFSPNGKYILTATLDNTLKLWDYSRGRCLKTYTGHKNEKY-CIFANFSVTGGKWIVSGSEDNLVYIWNLQTKEIVQKLQGHTDVVISAACH 306
BLAST of FC922050 vs. ExPASy Swiss-Prot
Match: TAF5_DROME (Transcription initiation factor TFIID subunit 5 OS=Drosophila melanogaster GN=Taf5 PE=1 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 2.601e-11 Identity = 34/107 (31.78%), Postives = 53/107 (49.53%), Query Frame = 1 Query: 235 EPLHKLQAHNGYILKCLLSPEFCEPHRYLATASSDHTVKIWNVDGFTLEKTLIGHQRWVWDCVFSVDGAYLITASSDATARLWSMSTGEDIRVYQGHHKATICCALH 555 E L H G + +C +PE L + S D T+++W++ ++ T GH VWD F+ G Y ++ S D TARLW+ + + +RV+ GH C H Sbjct: 441 EVTRSLMGHTGPVYRCAFAPEM----NLLLSCSEDSTIRLWSLLTWSCVVTYRGHVYPVWDVRFAPHGYYFVSCSYDKTARLWATDSNQALRVFVGHLSDVDCVQFH 543
BLAST of FC922050 vs. ExPASy Swiss-Prot
Match: LIN23_CAEEL (F-box/WD repeat-containing protein lin-23 OS=Caenorhabditis elegans GN=lin-23 PE=1 SV=2) HSP 1 Score: 69.3218 bits (168), Expect = 2.601e-11 Identity = 46/184 (25.00%), Postives = 85/184 (46.20%), Query Frame = 1 Query: 10 LHPNQTELISGDQNGNIRVWDLTANSCSCELVPEVDTAVRSLTVMWDGSLVVAANNHGTCYVWRLMRGTQTMT---NFEPLHKLQAHNGYILKCLLSPEFCEPHRYLATASSDHTVKIWNVDG---FTLEKTLIGHQRWVWDCVFSVDGAYLITASSDATARLWSMSTGEDIRVYQGHHKATIC 543 L + +++SG ++ I++WD SCS L + L + +D ++++ ++ T VW + G T + E + L+ NG ++ C S D ++ +W++ T+ + L+GH+ V V D Y+++AS D T ++WSM T E +R GH + C Sbjct: 228 LQYDDDKIVSGLRDNTIKIWDRKDYSCSRILSGHTGSV---LCLQYDNRVIISGSSDATVRVWDVETGECIKTLIHHCEAVLHLRFANGIMVTC----------------SKDRSIAVWDMVSPRDITIRRVLVGHRAAV--NVVDFDDRYIVSASGDRTIKVWSMDTLEFVRTLAGHRRGIAC 390
BLAST of FC922050 vs. ExPASy Swiss-Prot
Match: TUP1_DICDI (General transcriptional corepressor tupA OS=Dictyostelium discoideum GN=tupA PE=2 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 3.397e-11 Identity = 48/181 (26.52%), Postives = 80/181 (44.20%), Query Frame = 1 Query: 31 LISGDQNGNIRVWDLTANSCSCELVPEV---DTAVRSLTVMWDGSLVVAANNHGTCYVWRLMRGTQTMTNFEPLHKLQAHNGYILKCLLSPEFCEPHRYLATASSDHTVKIWNVDGFTLEK----TLIGHQRWVWDCVFSVDGAYLITASSDATARLWSMSTGEDIRVYQGHHKATICCAL 552 ++SG + ++WD+ C+ L E V S+ + DG LV A + +W G + L+ + G+ L + S F + LA+ S D ++K+W++ G T GH+ +V FS DG++LI+ S D + + W G + QGH + I AL Sbjct: 384 IVSGSGDKKAKIWDIEKGKCAFTLGNEEVGPKNGVTSVAMSPDGRLVAAGSLDNIVRLWDAQTG----------YFLERYEGH-LDSVYSVAFSPDGKSLASGSLDKSLKLWDLSGSRSRSRCRATFNGHKDFVLSVAFSPDGSWLISGSKDRSVQFWDPRNGTTHMMLQGHKNSVISVAL 553
BLAST of FC922050 vs. ExPASy Swiss-Prot
Match: SMU1_XENLA (WD40 repeat-containing protein SMU1 OS=Xenopus laevis GN=smu1 PE=2 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 4.436e-11 Identity = 47/169 (27.81%), Postives = 76/169 (44.97%), Query Frame = 1 Query: 16 PNQTELISGDQNGNIRVWDLTANSCSCELVPE-------VDTAVRSLTVMWDGSLVVAANNHGTCYVWRLMRGTQTMTNFEPLHKLQAHNGYILKCLLSPEFCEPHRYLATASSDHTVKIWNVDGFTLEKTLIGHQRWVWDCVFSVDGAYLITASSDATARLWSMSTGE 501 P+ L++G +G I VW+ T +L + +D AV + D ++ G VW++ G Q + FE H + CL F + + +AS D T++I + K GH +V + F+ DG Y+I+ASSD T ++W+M T E Sbjct: 224 PDGQYLVTGSVDGFIEVWNFTTGKIRKDLKYQAQDNFMMMDDAVLCMCFSRDTEMLATGAQDGKIKVWKIQSG-QCLRRFERAHSKG------VTCL---SFSKDSSQILSASFDQTIRIHGLKSGKTLKEFRGHSSFVNEATFTQDGHYIISASSDGTVKIWNMKTTE 382
BLAST of FC922050 vs. ExPASy Swiss-Prot
Match: SMU1_RAT (WD40 repeat-containing protein SMU1 OS=Rattus norvegicus GN=Smu1 PE=2 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 4.436e-11 Identity = 47/169 (27.81%), Postives = 76/169 (44.97%), Query Frame = 1 Query: 16 PNQTELISGDQNGNIRVWDLTANSCSCELVPE-------VDTAVRSLTVMWDGSLVVAANNHGTCYVWRLMRGTQTMTNFEPLHKLQAHNGYILKCLLSPEFCEPHRYLATASSDHTVKIWNVDGFTLEKTLIGHQRWVWDCVFSVDGAYLITASSDATARLWSMSTGE 501 P+ L++G +G I VW+ T +L + +D AV + D ++ G VW++ G Q + FE H + CL F + + +AS D T++I + K GH +V + F+ DG Y+I+ASSD T ++W+M T E Sbjct: 224 PDGQYLVTGSVDGFIEVWNFTTGKIRKDLKYQAQDNFMMMDDAVLCMCFSRDTEMLATGAQDGKIKVWKIQSG-QCLRRFERAHSKG------VTCL---SFSKDSSQILSASFDQTIRIHGLKSGKTLKEFRGHSSFVNEATFTQDGHYIISASSDGTVKIWNMKTTE 382
BLAST of FC922050 vs. ExPASy Swiss-Prot
Match: SMU1_MOUSE (WD40 repeat-containing protein SMU1 OS=Mus musculus GN=Smu1 PE=2 SV=2) HSP 1 Score: 68.5514 bits (166), Expect = 4.436e-11 Identity = 47/169 (27.81%), Postives = 76/169 (44.97%), Query Frame = 1 Query: 16 PNQTELISGDQNGNIRVWDLTANSCSCELVPE-------VDTAVRSLTVMWDGSLVVAANNHGTCYVWRLMRGTQTMTNFEPLHKLQAHNGYILKCLLSPEFCEPHRYLATASSDHTVKIWNVDGFTLEKTLIGHQRWVWDCVFSVDGAYLITASSDATARLWSMSTGE 501 P+ L++G +G I VW+ T +L + +D AV + D ++ G VW++ G Q + FE H + CL F + + +AS D T++I + K GH +V + F+ DG Y+I+ASSD T ++W+M T E Sbjct: 224 PDGQYLVTGSVDGFIEVWNFTTGKIRKDLKYQAQDNFMMMDDAVLCMCFSRDTEMLATGAQDGKIKVWKIQSG-QCLRRFERAHSKG------VTCL---SFSKDSSQILSASFDQTIRIHGLKSGKTLKEFRGHSSFVNEATFTQDGHYIISASSDGTVKIWNMKTTE 382
BLAST of FC922050 vs. ExPASy Swiss-Prot
Match: SMU1_HUMAN (WD40 repeat-containing protein SMU1 OS=Homo sapiens GN=SMU1 PE=1 SV=2) HSP 1 Score: 68.5514 bits (166), Expect = 4.436e-11 Identity = 47/169 (27.81%), Postives = 76/169 (44.97%), Query Frame = 1 Query: 16 PNQTELISGDQNGNIRVWDLTANSCSCELVPE-------VDTAVRSLTVMWDGSLVVAANNHGTCYVWRLMRGTQTMTNFEPLHKLQAHNGYILKCLLSPEFCEPHRYLATASSDHTVKIWNVDGFTLEKTLIGHQRWVWDCVFSVDGAYLITASSDATARLWSMSTGE 501 P+ L++G +G I VW+ T +L + +D AV + D ++ G VW++ G Q + FE H + CL F + + +AS D T++I + K GH +V + F+ DG Y+I+ASSD T ++W+M T E Sbjct: 224 PDGQYLVTGSVDGFIEVWNFTTGKIRKDLKYQAQDNFMMMDDAVLCMCFSRDTEMLATGAQDGKIKVWKIQSG-QCLRRFERAHSKG------VTCL---SFSKDSSQILSASFDQTIRIHGLKSGKTLKEFRGHSSFVNEATFTQDGHYIISASSDGTVKIWNMKTTE 382 The following BLAST results are available for this feature:
BLAST of FC922050 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 90
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Sequences
The
following sequences are available for this feature:
EST sequence >FC922050 ID=FC922050; Name=FC922050; organism=Citrus sinensis; type=EST; length=765bpback to top |