DN620781

Overview
NameDN620781
Unique NameDN620781
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length740
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DN620781 vs. ExPASy Swiss-Prot
Match: CHS1_HORVU (Chalcone synthase 1 OS=Hordeum vulgare GN=CHS1 PE=3 SV=1)

HSP 1 Score: 297.36 bits (760), Expect = 5.497e-80
Identity = 149/196 (76.02%), Postives = 161/196 (82.14%), Query Frame = -2
Query:  152 VTFRGPADTHLDSLVGQALFXXXXXXXXXXXDPDTSVERPLYQLVSTSQTILPDSDGAIDGHLREVGLTFHLLKDVPGLISKNIEKSLSEAFAPLGISDWNSIFWIAHPGGPAILDQVEFXXXXXXXXXKATRQVLSEYGNMSSACVLFILDEMRKKSVEEAKATTGEGLDWGVLFGFGPGLTVETVVLHSVPIKA 739
            VTFRGP ++HLDSLVGQALF           DPD SVERPL+QLVS SQTILPDS+GAIDGHLREVGLTFHLLKDVPGLISKNIE++L EAF PLGI  WNS+FWIAH GGPAILD VE          +ATR VLSEYGNMSSACVLFI+DEMRK+S E+  ATTGEG+DWGVLFGFGPGLTVETVVLHSVPI A
Sbjct:  199 VTFRGPHESHLDSLVGQALFGDGAAAVIIGADPDLSVERPLFQLVSASQTILPDSEGAIDGHLREVGLTFHLLKDVPGLISKNIERALEEAFKPLGIDHWNSVFWIAHQGGPAILDMVEAKVNLNKERMRATRHVLSEYGNMSSACVLFIMDEMRKRSAEDGHATTGEGMDWGVLFGFGPGLTVETVVLHSVPISA 394          
BLAST of DN620781 vs. ExPASy Swiss-Prot
Match: CHS2_SOLLC (Chalcone synthase 2 OS=Solanum lycopersicum GN=CHS2 PE=2 SV=2)

HSP 1 Score: 296.975 bits (759), Expect = 7.179e-80
Identity = 150/192 (78.12%), Postives = 161/192 (83.85%), Query Frame = -2
Query:  164 VTFRGPADTHLDSLVGQALFXXXXXXXXXXXDPDTSVERPLYQLVSTSQTILPDSDGAIDGHLREVGLTFHLLKDVPGLISKNIEKSLSEAFAPLGISDWNSIFWIAHPGGPAILDQVEFXXXXXXXXXKATRQVLSEYGNMSSACVLFILDEMRKKSVEEAKATTGEGLDWGVLFGFGPGLTVETVVLHSV 739
            VTFRGP+DTHLDS+VGQALF           DP   VERPL++LVS +QT+LPDS+GAIDGHLREVGLTFHLLKDVPGLISKNIEKSL EAF PLGISDWNSIFWIAHPGGPAILDQVE          +ATRQVLS+YGNMSSACVLFILDEMRK S +E  +TTGEGLDWGVLFGFGPGLTVETVVLHSV
Sbjct:  196 VTFRGPSDTHLDSMVGQALFGDRAAAMIIGSDPLPEVERPLFELVSAAQTLLPDSEGAIDGHLREVGLTFHLLKDVPGLISKNIEKSLIEAFQPLGISDWNSIFWIAHPGGPAILDQVELKLSLKPEKLRATRQVLSDYGNMSSACVLFILDEMRKASSKEGLSTTGEGLDWGVLFGFGPGLTVETVVLHSV 387          
BLAST of DN620781 vs. ExPASy Swiss-Prot
Match: CHS1_SINAL (Chalcone synthase 1 OS=Sinapis alba GN=CHS1 PE=2 SV=1)

HSP 1 Score: 296.975 bits (759), Expect = 7.179e-80
Identity = 150/195 (76.92%), Postives = 163/195 (83.59%), Query Frame = -2
Query:  158 VTFRGPADTHLDSLVGQALFXXXXXXXXXXXDPDTSV-ERPLYQLVSTSQTILPDSDGAIDGHLREVGLTFHLLKDVPGLISKNIEKSLSEAFAPLGISDWNSIFWIAHPGGPAILDQVEFXXXXXXXXXKATRQVLSEYGNMSSACVLFILDEMRKKSVEEAKATTGEGLDWGVLFGFGPGLTVETVVLHSVPI 739
            VTFRGP+DTHLDSLVGQALF           D D S  E+P++++VS +QTILPDSDGAIDGHLREVGLTFHLLKDVPGLISKNIEKSL EAF PLGISDWNS+FWIAHPGGPAILD VE          +ATR VLSEYGNMSSACVLFILDEMR+KSVE+  ATTGEGL+WGVLFGFGPGLTVETVVLHSVP+
Sbjct:  201 VTFRGPSDTHLDSLVGQALFSDGAAALIVGSDADISAGEKPIFEMVSAAQTILPDSDGAIDGHLREVGLTFHLLKDVPGLISKNIEKSLDEAFKPLGISDWNSLFWIAHPGGPAILDDVEKKLGLKAEKMRATRHVLSEYGNMSSACVLFILDEMRRKSVEDGVATTGEGLEWGVLFGFGPGLTVETVVLHSVPV 395          
BLAST of DN620781 vs. ExPASy Swiss-Prot
Match: CHS1_CAMSI (Chalcone synthase 1 OS=Camellia sinensis GN=CHS1 PE=2 SV=1)

HSP 1 Score: 296.59 bits (758), Expect = 9.377e-80
Identity = 149/192 (77.60%), Postives = 160/192 (83.33%), Query Frame = -2
Query:  164 VTFRGPADTHLDSLVGQALFXXXXXXXXXXXDPDTSVERPLYQLVSTSQTILPDSDGAIDGHLREVGLTFHLLKDVPGLISKNIEKSLSEAFAPLGISDWNSIFWIAHPGGPAILDQVEFXXXXXXXXXKATRQVLSEYGNMSSACVLFILDEMRKKSVEEAKATTGEGLDWGVLFGFGPGLTVETVVLHSV 739
            VTFRGP+DTHLDSLVGQALF           DP   VE+PL++LVS +QTILPDSDGAIDGHLREVGLTFHLLKDVPGLISKNIEKSL+EAF PLGISDWNS+FWIAHPGGPAILDQVE          +ATR VLSEYGNMSSACVLFILDEMRKKS  +   TTGEGL+WGVLFGFGPGLTVETVVLHS+
Sbjct:  196 VTFRGPSDTHLDSLVGQALFGDGAAAIIVGSDPIPEVEKPLFELVSAAQTILPDSDGAIDGHLREVGLTFHLLKDVPGLISKNIEKSLAEAFQPLGISDWNSLFWIAHPGGPAILDQVELKLGLKEEKLRATRHVLSEYGNMSSACVLFILDEMRKKSAADGLKTTGEGLEWGVLFGFGPGLTVETVVLHSL 387          
BLAST of DN620781 vs. ExPASy Swiss-Prot
Match: CHS1_SORBI (Chalcone synthase 1 OS=Sorghum bicolor GN=CHS1 PE=3 SV=1)

HSP 1 Score: 295.819 bits (756), Expect = 1.599e-79
Identity = 147/194 (75.77%), Postives = 162/194 (83.51%), Query Frame = -2
Query:  158 VTFRGPADTHLDSLVGQALFXXXXXXXXXXXDPDTSVERPLYQLVSTSQTILPDSDGAIDGHLREVGLTFHLLKDVPGLISKNIEKSLSEAFAPLGISDWNSIFWIAHPGGPAILDQVEFXXXXXXXXXKATRQVLSEYGNMSSACVLFILDEMRKKSVEEAKATTGEGLDWGVLFGFGPGLTVETVVLHSVPI 739
            VTFRGP+++HLDS+VGQALF           DPD  VERPL+QLVS SQ ILPDS+GAIDGHLREVGLTFHLLKDVPGLISKNIE++L EAF PLGI+D+NSIFW+AHPGGPAILDQVE          +ATR VLSEYGNMSSACVLFILDEMRK+S E+ + TTGEG DWGVLFGFGPGLTVETVVLHSVPI
Sbjct:  200 VTFRGPSESHLDSMVGQALFGDGAAAVIVGADPDERVERPLFQLVSASQRILPDSEGAIDGHLREVGLTFHLLKDVPGLISKNIERALEEAFKPLGITDYNSIFWVAHPGGPAILDQVEAKVGLEKERMRATRHVLSEYGNMSSACVLFILDEMRKRSAEDGQTTTGEGFDWGVLFGFGPGLTVETVVLHSVPI 393          
BLAST of DN620781 vs. ExPASy Swiss-Prot
Match: CHS1_CASGL (Chalcone synthase OS=Casuarina glauca GN=CHS1 PE=2 SV=1)

HSP 1 Score: 295.819 bits (756), Expect = 1.599e-79
Identity = 149/192 (77.60%), Postives = 160/192 (83.33%), Query Frame = -2
Query:  164 VTFRGPADTHLDSLVGQALFXXXXXXXXXXXDPDTSVERPLYQLVSTSQTILPDSDGAIDGHLREVGLTFHLLKDVPGLISKNIEKSLSEAFAPLGISDWNSIFWIAHPGGPAILDQVEFXXXXXXXXXKATRQVLSEYGNMSSACVLFILDEMRKKSVEEAKATTGEGLDWGVLFGFGPGLTVETVVLHSV 739
            VTFRGP+DTHLDSLVGQALF           DP   VE+PL+++VST+QTILPDSDGAIDGHLREVG+TFHLLKDVPGLISKNIEKSL EAF PLGISDWNS+FWIAHPGGPAILDQVE           ATR VLSEYGNMSSACVLFILDEMR+KS E+   TTGEGLDWGVLFGFGPGLTVETVVLHS+
Sbjct:  196 VTFRGPSDTHLDSLVGQALFGDGAAAIIVGADPLPEVEKPLFEVVSTAQTILPDSDGAIDGHLREVGVTFHLLKDVPGLISKNIEKSLVEAFQPLGISDWNSLFWIAHPGGPAILDQVEEKLALKPEKLGATRHVLSEYGNMSSACVLFILDEMRRKSAEKGLKTTGEGLDWGVLFGFGPGLTVETVVLHSL 387          
BLAST of DN620781 vs. ExPASy Swiss-Prot
Match: CHSY_HYPAN (Chalcone synthase OS=Hypericum androsaemum PE=1 SV=1)

HSP 1 Score: 295.434 bits (755), Expect = 2.089e-79
Identity = 148/194 (76.29%), Postives = 161/194 (82.99%), Query Frame = -2
Query:  158 VTFRGPADTHLDSLVGQALFXXXXXXXXXXXDPDTSVERPLYQLVSTSQTILPDSDGAIDGHLREVGLTFHLLKDVPGLISKNIEKSLSEAFAPLGISDWNSIFWIAHPGGPAILDQVEFXXXXXXXXXKATRQVLSEYGNMSSACVLFILDEMRKKSVEEAKATTGEGLDWGVLFGFGPGLTVETVVLHSVPI 739
            VTFRGP DTHLDSLVGQALF           DP   VE+PL++LVS +QTILPDS+GAIDGHLREVGLTFHLLKDVPGLISKN+EKSL+EAF PLGISDWNS+FWIAHPGGPAILDQVE          +ATR VLSEYGNMSSACVLFILDEMR+KS E+   TTGEG++WGVLFGFGPGLTVETVVLHSV I
Sbjct:  196 VTFRGPTDTHLDSLVGQALFGDGAAAIIIGSDPIPEVEKPLFELVSAAQTILPDSEGAIDGHLREVGLTFHLLKDVPGLISKNVEKSLTEAFKPLGISDWNSLFWIAHPGGPAILDQVEAKLSLKPEKLRATRHVLSEYGNMSSACVLFILDEMRRKSKEDGLKTTGEGIEWGVLFGFGPGLTVETVVLHSVAI 389          
BLAST of DN620781 vs. ExPASy Swiss-Prot
Match: CHS2_SOLTU (Chalcone synthase 2 OS=Solanum tuberosum GN=CHS2 PE=2 SV=1)

HSP 1 Score: 294.664 bits (753), Expect = 3.563e-79
Identity = 149/192 (77.60%), Postives = 160/192 (83.33%), Query Frame = -2
Query:  164 VTFRGPADTHLDSLVGQALFXXXXXXXXXXXDPDTSVERPLYQLVSTSQTILPDSDGAIDGHLREVGLTFHLLKDVPGLISKNIEKSLSEAFAPLGISDWNSIFWIAHPGGPAILDQVEFXXXXXXXXXKATRQVLSEYGNMSSACVLFILDEMRKKSVEEAKATTGEGLDWGVLFGFGPGLTVETVVLHSV 739
            VTF GP+DTHLDS+VGQALF           DP   VERPL++LVS +QT+LPDS+GAIDGHLREVGLTFHLLKDVPGLISKNIEKSL EAF PLGISDWNSIFWIAHPGGPAILDQVE          +ATRQVLS+YGNMSSACVLFILDEMRK S +E  +TTGEGLDWGVLFGFGPGLTVETVVLHSV
Sbjct:  196 VTFSGPSDTHLDSMVGQALFGDGAAAMIIGSDPLPEVERPLFELVSAAQTLLPDSEGAIDGHLREVGLTFHLLKDVPGLISKNIEKSLIEAFQPLGISDWNSIFWIAHPGGPAILDQVELKLGLKPEKLQATRQVLSDYGNMSSACVLFILDEMRKASSKEGLSTTGEGLDWGVLFGFGPGLTVETVVLHSV 387          
BLAST of DN620781 vs. ExPASy Swiss-Prot
Match: CHS1_CITSI (Chalcone synthase 1 OS=Citrus sinensis GN=CHS1 PE=2 SV=1)

HSP 1 Score: 294.664 bits (753), Expect = 3.563e-79
Identity = 147/192 (76.56%), Postives = 160/192 (83.33%), Query Frame = -2
Query:  164 VTFRGPADTHLDSLVGQALFXXXXXXXXXXXDPDTSVERPLYQLVSTSQTILPDSDGAIDGHLREVGLTFHLLKDVPGLISKNIEKSLSEAFAPLGISDWNSIFWIAHPGGPAILDQVEFXXXXXXXXXKATRQVLSEYGNMSSACVLFILDEMRKKSVEEAKATTGEGLDWGVLFGFGPGLTVETVVLHSV 739
            VTFRGP+DTHLDSLVGQALF           DP   +E+P+++LVST+QTILPDSDG+IDGHLRE GLTFHLLKDVPGLISKNI+KSL+EAF PLGISDWNSIFWIAHPGGPAILDQVE          +ATR VLSEYGNMSSACVLFILDEMRKKS E+   T GEGL+WGVLFGFGPGLTVETVVLHSV
Sbjct:  195 VTFRGPSDTHLDSLVGQALFGDGAAAIIIGADPIPEIEKPMFELVSTAQTILPDSDGSIDGHLREAGLTFHLLKDVPGLISKNIQKSLTEAFKPLGISDWNSIFWIAHPGGPAILDQVEEKLGLKPEKLRATRHVLSEYGNMSSACVLFILDEMRKKSAEDGLETAGEGLEWGVLFGFGPGLTVETVVLHSV 386          
BLAST of DN620781 vs. ExPASy Swiss-Prot
Match: CHSJ_PETHY (Chalcone synthase J OS=Petunia hybrida GN=CHSJ PE=2 SV=2)

HSP 1 Score: 293.893 bits (751), Expect = 6.078e-79
Identity = 150/192 (78.12%), Postives = 158/192 (82.29%), Query Frame = -2
Query:  164 VTFRGPADTHLDSLVGQALFXXXXXXXXXXXDPDTSVERPLYQLVSTSQTILPDSDGAIDGHLREVGLTFHLLKDVPGLISKNIEKSLSEAFAPLGISDWNSIFWIAHPGGPAILDQVEFXXXXXXXXXKATRQVLSEYGNMSSACVLFILDEMRKKSVEEAKATTGEGLDWGVLFGFGPGLTVETVVLHSV 739
            VTFRGP DTHLDSLVGQALF           DP   VERPL++LVS SQT+LPDS+GAIDGHLREVGLTFHLLKDVPGLISKNI+KSL EAF PLGISDWNSIFWIAHPGGPAILDQVE          +ATR VLSEYGNMSSACVLFILDEMRK S +E   TTGEGL+WGVLFGFGPGLTVETVVLHSV
Sbjct:  196 VTFRGPNDTHLDSLVGQALFGDGAAAIIIGSDPLPGVERPLFELVSASQTLLPDSEGAIDGHLREVGLTFHLLKDVPGLISKNIQKSLVEAFQPLGISDWNSIFWIAHPGGPAILDQVELKLGLKPEKLRATRHVLSEYGNMSSACVLFILDEMRKASSKEGLGTTGEGLEWGVLFGFGPGLTVETVVLHSV 387          
The following BLAST results are available for this feature:
BLAST of DN620781 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 145
Match NameE-valueIdentityDescription
CHS1_HORVU5.497e-8076.02Chalcone synthase 1 OS=Hordeum vulgare GN=CHS1 PE=... [more]
CHS2_SOLLC7.179e-8078.13Chalcone synthase 2 OS=Solanum lycopersicum GN=CHS... [more]
CHS1_SINAL7.179e-8076.92Chalcone synthase 1 OS=Sinapis alba GN=CHS1 PE=2 S... [more]
CHS1_CAMSI9.377e-8077.60Chalcone synthase 1 OS=Camellia sinensis GN=CHS1 P... [more]
CHS1_SORBI1.599e-7975.77Chalcone synthase 1 OS=Sorghum bicolor GN=CHS1 PE=... [more]
CHS1_CASGL1.599e-7977.60Chalcone synthase OS=Casuarina glauca GN=CHS1 PE=2... [more]
CHSY_HYPAN2.089e-7976.29Chalcone synthase OS=Hypericum androsaemum PE=1 SV... [more]
CHS2_SOLTU3.563e-7977.60Chalcone synthase 2 OS=Solanum tuberosum GN=CHS2 P... [more]
CHS1_CITSI3.563e-7976.56Chalcone synthase 1 OS=Citrus sinensis GN=CHS1 PE=... [more]
CHSJ_PETHY6.078e-7978.13Chalcone synthase J OS=Petunia hybrida GN=CHSJ PE=... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_05M23_f Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0005M23, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN620781 ID=DN620781; Name=DN620781; organism=Citrus sinensis; type=EST; length=740bp
TTTTTTTTTTTTTTTTTAAGAGAAAAGGCACGATGCCTTAAACTCAATTG
ACAAAACTAAACCTTCACACGATCAACCAATAACTCAACTGTGAAAGCAT
ACAACATAAAGTTACTGAACTACTAAACATACTGATGGAGTTCTCACTTC
AAGCTTTGATGGGGACACTGTGCAGCACAACGGTCTCGACGGTGAGCCCC
GGCCCGAACCCGAACAGCACACCCCAATCAAGCCCTTCGCCGGTGGTGGC
TTTCGCTTCCTCAACAGACTTCTTTCTCATCTCGTCAAGGATGAACAAGA
CACAAGCGCTTGACATGTTACCGTACTCACTCAACACTTGACGTGTGGCC
TTCAGCTTCTCCCCTTTGAGGCCCAGTTTAAACTCCACTTGGTCCAGAAT
TGCGGGCCCACCGGGGTGAGCGATCCAAAATATCGAGTTCCAGTCGCTGA
TGCCAAGCGGGGCGAACGCTTCAGACAGGCTTTTCTCTATATTCTTTGAG
ATCAAGCCGGGGACGTCTTTAAGCAAATGGAAAGTGAGACCGACTTCGCG
CAAGTGTCCGTCAATTGCACCGTCAGAGTCAGGGAGGATCGTCTGCGAAG
TCGACACGAGCTGATACAACGGACGCTCGACCGACGTGTCAGGATCGGCA
CCCACGATCACAGCAGCAGCACCATCACCGAACAAAGCCTGGCCCACAAG
AGAATCAAGATGAGTATCGGCAGGGCCGCGGAAAGTGACT
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