EG358250

Overview
NameEG358250
Unique NameEG358250
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length298
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EG358250 vs. ExPASy Swiss-Prot
Match: CHSB_PETHY (Chalcone synthase B OS=Petunia hybrida GN=CHSB PE=2 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 5.763e-19
Identity = 41/61 (67.21%), Postives = 53/61 (86.89%), Query Frame = 2
Query:  116 AQRDQGPATIMDIGTATPPNCVDQSTYPDYYFRITNSEQMTDLKEKFKRMCDKSMIKKRYM 298
            AQR +GPA I+ IGTATP + VDQ++YPDYYFR+TNS+ + DLKEKF+R+C K+MIKKR+M
Sbjct:   13 AQRAEGPAKILAIGTATPFHWVDQNSYPDYYFRVTNSQHLVDLKEKFRRICSKTMIKKRHM 73          
BLAST of EG358250 vs. ExPASy Swiss-Prot
Match: ACS4_RUTGR (Probable acridone synthase 4 OS=Ruta graveolens GN=ACS4 PE=2 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 1.284e-18
Identity = 41/65 (63.08%), Postives = 52/65 (80.00%), Query Frame = 2
Query:  104 EFRKAQRDQGPATIMDIGTATPPNCVDQSTYPDYYFRITNSEQMTDLKEKFKRMCDKSMIKKRYM 298
            E RKAQ  +GPA I+ IGTATP N   Q+ YPDYYFR+T SE MT+LK+KF+ +C+KSMI+KR+M
Sbjct:    6 EMRKAQMSEGPAAILAIGTATPNNVYMQADYPDYYFRMTKSEHMTELKDKFRTLCEKSMIRKRHM 70          
BLAST of EG358250 vs. ExPASy Swiss-Prot
Match: CHSB_IPOCO (Chalcone synthase B (Fragment) OS=Ipomoea cordatotriloba GN=CHSB PE=3 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 2.190e-18
Identity = 42/71 (59.15%), Postives = 57/71 (80.28%), Query Frame = 2
Query:   86 TMVTDYEFRKAQRDQGPATIMDIGTATPPNCVDQSTYPDYYFRITNSEQMTDLKEKFKRMCDKSMIKKRYM 298
            T++TD   R+ +R +G A I+ IGTATP N VDQ+TYPD+YFRITNS+ + D KEKF+R+C+KS I+KR+M
Sbjct:    6 TVLTDTWSRREKRFEGHAKILAIGTATPANWVDQTTYPDFYFRITNSQHLLDHKEKFRRICNKSKIRKRHM 76          
BLAST of EG358250 vs. ExPASy Swiss-Prot
Match: CHSY_EQUAR (Chalcone synthase OS=Equisetum arvense GN=CHS PE=2 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 4.879e-18
Identity = 42/63 (66.67%), Postives = 49/63 (77.78%), Query Frame = 2
Query:  110 RKAQRDQGPATIMDIGTATPPNCVDQSTYPDYYFRITNSEQMTDLKEKFKRMCDKSMIKKRYM 298
            R AQR  GPAT++ IGTA P N  +QS+YPD+YF ITNS+ MT+LK KF RMC KS IKKRYM
Sbjct:   14 RLAQRANGPATVLAIGTANPANVFEQSSYPDFYFDITNSQHMTELKLKFSRMCQKSGIKKRYM 76          
BLAST of EG358250 vs. ExPASy Swiss-Prot
Match: ACS3_RUTGR (Probable acridone synthase 3 OS=Ruta graveolens GN=ACS3 PE=2 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 8.322e-18
Identity = 39/65 (60.00%), Postives = 51/65 (78.46%), Query Frame = 2
Query:  104 EFRKAQRDQGPATIMDIGTATPPNCVDQSTYPDYYFRITNSEQMTDLKEKFKRMCDKSMIKKRYM 298
            E RKAQ  +GPA I+ IGTA P N   Q+ YPDYYF++T SE MT+LK+KF+ +C+KSMI+KR+M
Sbjct:    6 EMRKAQMSEGPAAILAIGTANPDNVYMQADYPDYYFKMTKSEHMTELKDKFRTLCEKSMIRKRHM 70          
BLAST of EG358250 vs. ExPASy Swiss-Prot
Match: CHSA_IPOPL (Chalcone synthase A (Fragment) OS=Ipomoea platensis GN=CHSA PE=2 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 1.087e-17
Identity = 40/71 (56.34%), Postives = 57/71 (80.28%), Query Frame = 2
Query:   86 TMVTDYEFRKAQRDQGPATIMDIGTATPPNCVDQSTYPDYYFRITNSEQMTDLKEKFKRMCDKSMIKKRYM 298
            T++ D   R+A+R +G A I+ +GTATP N VDQ+TYPD+YFRITNSE + + KEKF+R+C+KS I+KR++
Sbjct:    4 TVLPDTWSRRAKRFEGHAKILAVGTATPANWVDQTTYPDFYFRITNSEHLLEHKEKFRRICNKSKIRKRHL 74          
BLAST of EG358250 vs. ExPASy Swiss-Prot
Match: CHSB_IPOPU (Chalcone synthase B OS=Ipomoea purpurea GN=CHSB PE=3 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 1.420e-17
Identity = 40/71 (56.34%), Postives = 58/71 (81.69%), Query Frame = 2
Query:   86 TMVTDYEFRKAQRDQGPATIMDIGTATPPNCVDQSTYPDYYFRITNSEQMTDLKEKFKRMCDKSMIKKRYM 298
            T++TD   R+A+R +G A I+ IGTATP + VDQ+TYPD+YFRITNS+ + + KEKF+R+C+KS I+KR++
Sbjct:    6 TVLTDTWSRRAKRLEGDAKILAIGTATPASWVDQTTYPDFYFRITNSQHLLEHKEKFRRICNKSKIRKRHL 76          
BLAST of EG358250 vs. ExPASy Swiss-Prot
Match: CHSA_IPOPU (Chalcone synthase A OS=Ipomoea purpurea GN=CHSA PE=3 SV=2)

HSP 1 Score: 88.1965 bits (217), Expect = 1.420e-17
Identity = 41/71 (57.75%), Postives = 56/71 (78.87%), Query Frame = 2
Query:   86 TMVTDYEFRKAQRDQGPATIMDIGTATPPNCVDQSTYPDYYFRITNSEQMTDLKEKFKRMCDKSMIKKRYM 298
            T++TD    +A+R +G A I+ IGTATP N VDQ+TYPD+YFRITNSE + + KEKF+R+C+KS I KR++
Sbjct:    6 TVLTDTWSHRAKRLEGDAKILAIGTATPANWVDQTTYPDFYFRITNSEHLLEHKEKFRRICNKSKIMKRHL 76          
BLAST of EG358250 vs. ExPASy Swiss-Prot
Match: CHSC_IPOPU (Chalcone synthase C (Fragment) OS=Ipomoea purpurea GN=CHSC PE=3 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 3.162e-17
Identity = 40/71 (56.34%), Postives = 55/71 (77.46%), Query Frame = 2
Query:   86 TMVTDYEFRKAQRDQGPATIMDIGTATPPNCVDQSTYPDYYFRITNSEQMTDLKEKFKRMCDKSMIKKRYM 298
            T++TD   R+ +R  G A I+ IGTA P N VDQ+TYPD+YFRITNSE + + KEKF+R+C+KS I+KR++
Sbjct:    6 TILTDTWTRREKRFDGHAKILAIGTAIPANWVDQTTYPDFYFRITNSEHLLEYKEKFRRICNKSKIRKRHL 76          
BLAST of EG358250 vs. ExPASy Swiss-Prot
Match: CHSB_IPOTF (Chalcone synthase B (Fragment) OS=Ipomoea trifida GN=CHSB PE=3 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 3.162e-17
Identity = 43/73 (58.90%), Postives = 58/73 (79.45%), Query Frame = 2
Query:   86 TMVTDYEFRKAQRDQ--GPATIMDIGTATPPNCVDQSTYPDYYFRITNSEQMTDLKEKFKRMCDKSMIKKRYM 298
            TM+TD   R+A+R +  G A I+ IGTATP N VDQ+TYPD+YFRITNS+ + + KEKF+R+C+KS I+KR+M
Sbjct:    6 TMLTDTWSRRAKRFEIEGYAKILAIGTATPANWVDQTTYPDFYFRITNSQHLLEHKEKFRRICNKSNIRKRHM 78          
The following BLAST results are available for this feature:
BLAST of EG358250 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 140
Match NameE-valueIdentityDescription
CHSB_PETHY5.763e-1967.21Chalcone synthase B OS=Petunia hybrida GN=CHSB PE=... [more]
ACS4_RUTGR1.284e-1863.08Probable acridone synthase 4 OS=Ruta graveolens GN... [more]
CHSB_IPOCO2.190e-1859.15Chalcone synthase B (Fragment) OS=Ipomoea cordatot... [more]
CHSY_EQUAR4.879e-1866.67Chalcone synthase OS=Equisetum arvense GN=CHS PE=2... [more]
ACS3_RUTGR8.322e-1860.00Probable acridone synthase 3 OS=Ruta graveolens GN... [more]
CHSA_IPOPL1.087e-1756.34Chalcone synthase A (Fragment) OS=Ipomoea platensi... [more]
CHSB_IPOPU1.420e-1756.34Chalcone synthase B OS=Ipomoea purpurea GN=CHSB PE... [more]
CHSA_IPOPU1.420e-1757.75Chalcone synthase A OS=Ipomoea purpurea GN=CHSA PE... [more]
CHSC_IPOPU3.162e-1756.34Chalcone synthase C (Fragment) OS=Ipomoea purpurea... [more]
CHSB_IPOTF3.162e-1758.90Chalcone synthase B (Fragment) OS=Ipomoea trifida ... [more]

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Properties
Property NameValue
Genbank description10g2 Citrus sinensis flesh suppression subtractive hybridization (SSH) cDNA library Moro nucellare 58-8D-I cultivar Citrus sinensis cDNA clone Cl0010g2, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EG358250 ID=EG358250; Name=EG358250; organism=Citrus sinensis; type=EST; length=298bp
CCGGGCAGGTACCCGGGGATACAAATTTATAAAACATCAGAAGAGCTAGA
TAGGTCTCCGGGAACCGATCGATTGGAAACAACAAACAATGGTGACCGAC
TATGAATTTCGGAAGGCTCAACGGGACCAAGGTCCGGCCACGATCATGGA
CATTGGAACGGCAACTCCACCGAATTGTGTTGATCAAAGCACGTATCCGG
ATTATTATTTTCGCATCACAAATAGTGAACAGATGACTGATCTTAAAGAG
AAATTCAAGCGCATGTGTGACAAATCCATGATCAAGAAGCGATACATG
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