EG358250

Overview
NameEG358250
Unique NameEG358250
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length298
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EG358250 vs. ExPASy Swiss-Prot
Match: CHS2_MAIZE (Chalcone synthase C2 OS=Zea mays GN=C2 PE=3 SV=1)

HSP 1 Score: 111.694 bits (278), Expect = 1.199e-24
Identity = 53/69 (76.81%), Postives = 58/69 (84.06%), Query Frame = 2
Query:   92 VTDYEFRKAQRDQGPATIMDIGTATPPNCVDQSTYPDYYFRITNSEQMTDLKEKFKRMCDKSMIKKRYM 298
            VT  E RKAQR  GPAT++ IGTATP NCV Q+ YPDYYFRIT SE +TDLKEKFKRMCDKSMI+KRYM
Sbjct:    6 VTVEEVRKAQRATGPATVLAIGTATPANCVYQADYPDYYFRITKSEHLTDLKEKFKRMCDKSMIRKRYM 74          
BLAST of EG358250 vs. ExPASy Swiss-Prot
Match: CHSY_BETVE (Chalcone synthase OS=Betula verrucosa GN=CHS PE=2 SV=2)

HSP 1 Score: 111.309 bits (277), Expect = 1.566e-24
Identity = 51/70 (72.86%), Postives = 58/70 (82.86%), Query Frame = 2
Query:   89 MVTDYEFRKAQRDQGPATIMDIGTATPPNCVDQSTYPDYYFRITNSEQMTDLKEKFKRMCDKSMIKKRYM 298
            M +  E RKAQR  GPAT++ IGTATP NC+ Q+ YPDYYFRIT S+ MT+LKEKFKRMCDKSMIKKRYM
Sbjct:    1 MASVEEIRKAQRAHGPATVLAIGTATPSNCITQADYPDYYFRITKSDHMTELKEKFKRMCDKSMIKKRYM 70          
BLAST of EG358250 vs. ExPASy Swiss-Prot
Match: CHS5_PEA (Chalcone synthase 5 OS=Pisum sativum GN=CHS5 PE=3 SV=1)

HSP 1 Score: 110.923 bits (276), Expect = 2.045e-24
Identity = 51/70 (72.86%), Postives = 60/70 (85.71%), Query Frame = 2
Query:   89 MVTDYEFRKAQRDQGPATIMDIGTATPPNCVDQSTYPDYYFRITNSEQMTDLKEKFKRMCDKSMIKKRYM 298
            MV+  E RKAQR +GPATI+ IGTA P NCV+QSTYPD+YFRITNSE  T+LK+KF+RMCDKSMI +RYM
Sbjct:    1 MVSVSEIRKAQRAEGPATILAIGTANPANCVEQSTYPDFYFRITNSEHKTELKQKFQRMCDKSMINRRYM 70          
BLAST of EG358250 vs. ExPASy Swiss-Prot
Match: CHS3_PEA (Chalcone synthase 3 OS=Pisum sativum GN=CHS3 PE=3 SV=1)

HSP 1 Score: 110.923 bits (276), Expect = 2.045e-24
Identity = 51/70 (72.86%), Postives = 60/70 (85.71%), Query Frame = 2
Query:   89 MVTDYEFRKAQRDQGPATIMDIGTATPPNCVDQSTYPDYYFRITNSEQMTDLKEKFKRMCDKSMIKKRYM 298
            MV+  E RKAQR +GPATI+ IGTA P NCV+QSTYPD+YFRITNSE  T+LK+KF+RMCDKSMI +RYM
Sbjct:    1 MVSVSEIRKAQRAEGPATILAIGTANPANCVEQSTYPDFYFRITNSEHKTELKQKFQRMCDKSMINRRYM 70          
BLAST of EG358250 vs. ExPASy Swiss-Prot
Match: CHS9_MEDSA (Chalcone synthase 9 OS=Medicago sativa GN=CHS9 PE=2 SV=1)

HSP 1 Score: 110.538 bits (275), Expect = 2.671e-24
Identity = 51/70 (72.86%), Postives = 60/70 (85.71%), Query Frame = 2
Query:   89 MVTDYEFRKAQRDQGPATIMDIGTATPPNCVDQSTYPDYYFRITNSEQMTDLKEKFKRMCDKSMIKKRYM 298
            MV+  E R+AQR +GPATIM IGTA P NCV+QSTYPD+YF+ITNSE   +LKEKF+RMCDKSMIK+RYM
Sbjct:    1 MVSVSEIRQAQRAEGPATIMAIGTANPANCVEQSTYPDFYFKITNSEHKVELKEKFQRMCDKSMIKRRYM 70          
BLAST of EG358250 vs. ExPASy Swiss-Prot
Match: CHS8_MEDSA (Chalcone synthase 8 OS=Medicago sativa GN=CHS8 PE=2 SV=1)

HSP 1 Score: 110.538 bits (275), Expect = 2.671e-24
Identity = 51/70 (72.86%), Postives = 60/70 (85.71%), Query Frame = 2
Query:   89 MVTDYEFRKAQRDQGPATIMDIGTATPPNCVDQSTYPDYYFRITNSEQMTDLKEKFKRMCDKSMIKKRYM 298
            MV+  E R AQR +GPATI+ IGTA P NCV+QSTYPD+YF+ITNSE  T+LKEKF+RMCDKSMIK+RYM
Sbjct:    1 MVSVSEIRTAQRAEGPATILAIGTANPANCVEQSTYPDFYFKITNSEHKTELKEKFQRMCDKSMIKRRYM 70          
BLAST of EG358250 vs. ExPASy Swiss-Prot
Match: CHS3_MEDSA (Chalcone synthase 4-1 OS=Medicago sativa GN=CHS4-1 PE=2 SV=1)

HSP 1 Score: 110.538 bits (275), Expect = 2.671e-24
Identity = 51/70 (72.86%), Postives = 60/70 (85.71%), Query Frame = 2
Query:   89 MVTDYEFRKAQRDQGPATIMDIGTATPPNCVDQSTYPDYYFRITNSEQMTDLKEKFKRMCDKSMIKKRYM 298
            MV+  E R+AQR +GPATIM IGTA P NCV+QSTYPD+YF+ITNSE   +LKEKF+RMCDKSMIK+RYM
Sbjct:    1 MVSVSEIRQAQRAEGPATIMAIGTANPSNCVEQSTYPDFYFKITNSEHKVELKEKFQRMCDKSMIKRRYM 70          
BLAST of EG358250 vs. ExPASy Swiss-Prot
Match: CHS1_MEDSA (Chalcone synthase 1 OS=Medicago sativa GN=CHS1 PE=2 SV=1)

HSP 1 Score: 110.538 bits (275), Expect = 2.671e-24
Identity = 51/70 (72.86%), Postives = 60/70 (85.71%), Query Frame = 2
Query:   89 MVTDYEFRKAQRDQGPATIMDIGTATPPNCVDQSTYPDYYFRITNSEQMTDLKEKFKRMCDKSMIKKRYM 298
            MV+  E R+AQR +GPATIM IGTA P NCV+QSTYPD+YF+ITNSE   +LKEKF+RMCDKSMIK+RYM
Sbjct:    1 MVSVAEIRQAQRAEGPATIMAIGTANPANCVEQSTYPDFYFKITNSEHKVELKEKFQRMCDKSMIKRRYM 70          
BLAST of EG358250 vs. ExPASy Swiss-Prot
Match: CHS6_SORBI (Chalcone synthase 6 OS=Sorghum bicolor GN=CHS6 PE=3 SV=1)

HSP 1 Score: 110.153 bits (274), Expect = 3.488e-24
Identity = 52/69 (75.36%), Postives = 57/69 (82.61%), Query Frame = 2
Query:   92 VTDYEFRKAQRDQGPATIMDIGTATPPNCVDQSTYPDYYFRITNSEQMTDLKEKFKRMCDKSMIKKRYM 298
            VT  E RKAQR  GPAT++ IGTATP NCV Q+ YPDYYFRIT SE MT+LKEKFKRMCDKS I+KRYM
Sbjct:    6 VTVEEVRKAQRATGPATVLAIGTATPANCVHQADYPDYYFRITKSEHMTELKEKFKRMCDKSQIRKRYM 74          
BLAST of EG358250 vs. ExPASy Swiss-Prot
Match: CHS5_SORBI (Chalcone synthase 5 OS=Sorghum bicolor GN=CHS5 PE=3 SV=1)

HSP 1 Score: 110.153 bits (274), Expect = 3.488e-24
Identity = 52/69 (75.36%), Postives = 57/69 (82.61%), Query Frame = 2
Query:   92 VTDYEFRKAQRDQGPATIMDIGTATPPNCVDQSTYPDYYFRITNSEQMTDLKEKFKRMCDKSMIKKRYM 298
            VT  E RKAQR  GPAT++ IGTATP NCV Q+ YPDYYFRIT SE MT+LKEKFKRMCDKS I+KRYM
Sbjct:    6 VTVEEVRKAQRATGPATVLAIGTATPANCVHQADYPDYYFRITKSEHMTELKEKFKRMCDKSQIRKRYM 74          
The following BLAST results are available for this feature:
BLAST of EG358250 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 140
Match NameE-valueIdentityDescription
CHS2_MAIZE1.199e-2476.81Chalcone synthase C2 OS=Zea mays GN=C2 PE=3 SV=1[more]
CHSY_BETVE1.566e-2472.86Chalcone synthase OS=Betula verrucosa GN=CHS PE=2 ... [more]
CHS5_PEA2.045e-2472.86Chalcone synthase 5 OS=Pisum sativum GN=CHS5 PE=3 ... [more]
CHS3_PEA2.045e-2472.86Chalcone synthase 3 OS=Pisum sativum GN=CHS3 PE=3 ... [more]
CHS9_MEDSA2.671e-2472.86Chalcone synthase 9 OS=Medicago sativa GN=CHS9 PE=... [more]
CHS8_MEDSA2.671e-2472.86Chalcone synthase 8 OS=Medicago sativa GN=CHS8 PE=... [more]
CHS3_MEDSA2.671e-2472.86Chalcone synthase 4-1 OS=Medicago sativa GN=CHS4-1... [more]
CHS1_MEDSA2.671e-2472.86Chalcone synthase 1 OS=Medicago sativa GN=CHS1 PE=... [more]
CHS6_SORBI3.488e-2475.36Chalcone synthase 6 OS=Sorghum bicolor GN=CHS6 PE=... [more]
CHS5_SORBI3.488e-2475.36Chalcone synthase 5 OS=Sorghum bicolor GN=CHS5 PE=... [more]

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Properties
Property NameValue
Genbank description10g2 Citrus sinensis flesh suppression subtractive hybridization (SSH) cDNA library Moro nucellare 58-8D-I cultivar Citrus sinensis cDNA clone Cl0010g2, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EG358250 ID=EG358250; Name=EG358250; organism=Citrus sinensis; type=EST; length=298bp
CCGGGCAGGTACCCGGGGATACAAATTTATAAAACATCAGAAGAGCTAGA
TAGGTCTCCGGGAACCGATCGATTGGAAACAACAAACAATGGTGACCGAC
TATGAATTTCGGAAGGCTCAACGGGACCAAGGTCCGGCCACGATCATGGA
CATTGGAACGGCAACTCCACCGAATTGTGTTGATCAAAGCACGTATCCGG
ATTATTATTTTCGCATCACAAATAGTGAACAGATGACTGATCTTAAAGAG
AAATTCAAGCGCATGTGTGACAAATCCATGATCAAGAAGCGATACATG
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