EG358250

Overview
NameEG358250
Unique NameEG358250
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length298
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EG358250 vs. ExPASy Swiss-Prot
Match: CHS4_SORBI (Chalcone synthase 4 OS=Sorghum bicolor GN=CHS4 PE=3 SV=1)

HSP 1 Score: 110.153 bits (274), Expect = 3.488e-24
Identity = 52/69 (75.36%), Postives = 57/69 (82.61%), Query Frame = 2
Query:   92 VTDYEFRKAQRDQGPATIMDIGTATPPNCVDQSTYPDYYFRITNSEQMTDLKEKFKRMCDKSMIKKRYM 298
            VT  E RKAQR  GPAT++ IGTATP NCV Q+ YPDYYFRIT SE MT+LKEKFKRMCDKS I+KRYM
Sbjct:    6 VTVEEVRKAQRATGPATVLAIGTATPANCVHQADYPDYYFRITKSEHMTELKEKFKRMCDKSQIRKRYM 74          
BLAST of EG358250 vs. ExPASy Swiss-Prot
Match: CHS3_RUTGR (Chalcone synthase 3 OS=Ruta graveolens GN=CHS3 PE=2 SV=1)

HSP 1 Score: 110.153 bits (274), Expect = 3.488e-24
Identity = 53/69 (76.81%), Postives = 57/69 (82.61%), Query Frame = 2
Query:   92 VTDYEFRKAQRDQGPATIMDIGTATPPNCVDQSTYPDYYFRITNSEQMTDLKEKFKRMCDKSMIKKRYM 298
            VT  E RKAQR  GPAT++ IGTATP N V Q+ YPDYYFRIT SE MTDLKEKFKRMCDKSMI+KRYM
Sbjct:    4 VTVEEIRKAQRADGPATVLAIGTATPANYVTQADYPDYYFRITKSEHMTDLKEKFKRMCDKSMIRKRYM 72          
BLAST of EG358250 vs. ExPASy Swiss-Prot
Match: CHS2_SORBI (Chalcone synthase 2 OS=Sorghum bicolor GN=CHS2 PE=3 SV=1)

HSP 1 Score: 110.153 bits (274), Expect = 3.488e-24
Identity = 52/69 (75.36%), Postives = 57/69 (82.61%), Query Frame = 2
Query:   92 VTDYEFRKAQRDQGPATIMDIGTATPPNCVDQSTYPDYYFRITNSEQMTDLKEKFKRMCDKSMIKKRYM 298
            VT  E RKAQR  GPAT++ IGTATP NCV Q+ YPDYYFRIT SE MT+LKEKFKRMCDKS I+KRYM
Sbjct:    6 VTVEEVRKAQRATGPATVLAIGTATPANCVHQADYPDYYFRITKSEHMTELKEKFKRMCDKSQIRKRYM 74          
BLAST of EG358250 vs. ExPASy Swiss-Prot
Match: CHS1_SORBI (Chalcone synthase 1 OS=Sorghum bicolor GN=CHS1 PE=3 SV=1)

HSP 1 Score: 110.153 bits (274), Expect = 3.488e-24
Identity = 52/69 (75.36%), Postives = 57/69 (82.61%), Query Frame = 2
Query:   92 VTDYEFRKAQRDQGPATIMDIGTATPPNCVDQSTYPDYYFRITNSEQMTDLKEKFKRMCDKSMIKKRYM 298
            VT  E RKAQR  GPAT++ IGTATP NCV Q+ YPDYYFRIT SE MT+LKEKFKRMCDKS I+KRYM
Sbjct:    6 VTVEEVRKAQRATGPATVLAIGTATPANCVHQADYPDYYFRITKSEHMTELKEKFKRMCDKSQIRKRYM 74          
BLAST of EG358250 vs. ExPASy Swiss-Prot
Match: CHSY_HYDMC (Chalcone synthase OS=Hydrangea macrophylla GN=CHS PE=2 SV=1)

HSP 1 Score: 109.768 bits (273), Expect = 4.556e-24
Identity = 52/70 (74.29%), Postives = 58/70 (82.86%), Query Frame = 2
Query:   89 MVTDYEFRKAQRDQGPATIMDIGTATPPNCVDQSTYPDYYFRITNSEQMTDLKEKFKRMCDKSMIKKRYM 298
            MVT  E RKAQR +GPATI+ IGTATPPN VDQSTYPD+YFR+TNSE   +LK KF+RMCD S IKKRYM
Sbjct:    1 MVTVEEVRKAQRAEGPATILAIGTATPPNYVDQSTYPDFYFRVTNSEHKKELKAKFQRMCDNSQIKKRYM 70          
BLAST of EG358250 vs. ExPASy Swiss-Prot
Match: CHSY_CALCH (Chalcone synthase OS=Callistephus chinensis GN=CHS PE=2 SV=2)

HSP 1 Score: 108.997 bits (271), Expect = 7.771e-24
Identity = 51/63 (80.95%), Postives = 55/63 (87.30%), Query Frame = 2
Query:  110 RKAQRDQGPATIMDIGTATPPNCVDQSTYPDYYFRITNSEQMTDLKEKFKRMCDKSMIKKRYM 298
            R+AQR QGPATI+ IGTATP NCV Q+ YPDYYFRIT SE M DLKEKFKRMCDKSMI+KRYM
Sbjct:   11 REAQRRQGPATILAIGTATPSNCVYQADYPDYYFRITKSEHMVDLKEKFKRMCDKSMIRKRYM 73          
BLAST of EG358250 vs. ExPASy Swiss-Prot
Match: CHS5_MEDSA (Chalcone synthase 4-2 OS=Medicago sativa GN=CHS4-2 PE=2 SV=1)

HSP 1 Score: 108.997 bits (271), Expect = 7.771e-24
Identity = 50/70 (71.43%), Postives = 59/70 (84.29%), Query Frame = 2
Query:   89 MVTDYEFRKAQRDQGPATIMDIGTATPPNCVDQSTYPDYYFRITNSEQMTDLKEKFKRMCDKSMIKKRYM 298
            MV+  E R AQR +GPAT + IGTA P NCV+QSTYPD+YF+ITNSE  T+LKEKF+RMCDKSMIK+RYM
Sbjct:    1 MVSVSEIRNAQRAEGPATTLAIGTANPTNCVEQSTYPDFYFKITNSEHKTELKEKFQRMCDKSMIKRRYM 70          
BLAST of EG358250 vs. ExPASy Swiss-Prot
Match: CHS1_PEA (Chalcone synthase 1 OS=Pisum sativum GN=CHS1 PE=2 SV=1)

HSP 1 Score: 108.997 bits (271), Expect = 7.771e-24
Identity = 51/70 (72.86%), Postives = 59/70 (84.29%), Query Frame = 2
Query:   89 MVTDYEFRKAQRDQGPATIMDIGTATPPNCVDQSTYPDYYFRITNSEQMTDLKEKFKRMCDKSMIKKRYM 298
            MV+  E RK QR +GPATI+ IGTA P NCV+QSTYPD+YF+ITNSE  T LKEKF+RMCDKSMIK+RYM
Sbjct:    1 MVSVSEIRKPQRAEGPATILAIGTANPANCVEQSTYPDFYFKITNSEHKTVLKEKFQRMCDKSMIKRRYM 70          
BLAST of EG358250 vs. ExPASy Swiss-Prot
Match: CHSY_DIAMO (Chalcone synthase OS=Dianthus monspessulanus GN=CHS PE=2 SV=1)

HSP 1 Score: 108.612 bits (270), Expect = 1.015e-23
Identity = 50/70 (71.43%), Postives = 58/70 (82.86%), Query Frame = 2
Query:   89 MVTDYEFRKAQRDQGPATIMDIGTATPPNCVDQSTYPDYYFRITNSEQMTDLKEKFKRMCDKSMIKKRYM 298
            M +  E R+AQR  GPATI+ IGTATPPN + Q+ YPDYYFR+T SE MT+LKEKF+RMCDKSMIKKRYM
Sbjct:    1 MASIEEIRQAQRADGPATILAIGTATPPNAIYQADYPDYYFRVTKSEHMTELKEKFRRMCDKSMIKKRYM 70          
BLAST of EG358250 vs. ExPASy Swiss-Prot
Match: CHS4_PEA (Chalcone synthase 4 OS=Pisum sativum GN=CHS4 PE=3 SV=1)

HSP 1 Score: 108.612 bits (270), Expect = 1.015e-23
Identity = 50/70 (71.43%), Postives = 59/70 (84.29%), Query Frame = 2
Query:   89 MVTDYEFRKAQRDQGPATIMDIGTATPPNCVDQSTYPDYYFRITNSEQMTDLKEKFKRMCDKSMIKKRYM 298
            MV+  E RKAQR +GPATI+ IGTA P NCV+QSTYPD+YFRITNSE   +LK+KF+RMCDKSMI +RYM
Sbjct:    1 MVSVSEIRKAQRAEGPATILAIGTANPANCVEQSTYPDFYFRITNSEHKIELKQKFQRMCDKSMINRRYM 70          
The following BLAST results are available for this feature:
BLAST of EG358250 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 140
Match NameE-valueIdentityDescription
CHS4_SORBI3.488e-2475.36Chalcone synthase 4 OS=Sorghum bicolor GN=CHS4 PE=... [more]
CHS3_RUTGR3.488e-2476.81Chalcone synthase 3 OS=Ruta graveolens GN=CHS3 PE=... [more]
CHS2_SORBI3.488e-2475.36Chalcone synthase 2 OS=Sorghum bicolor GN=CHS2 PE=... [more]
CHS1_SORBI3.488e-2475.36Chalcone synthase 1 OS=Sorghum bicolor GN=CHS1 PE=... [more]
CHSY_HYDMC4.556e-2474.29Chalcone synthase OS=Hydrangea macrophylla GN=CHS ... [more]
CHSY_CALCH7.771e-2480.95Chalcone synthase OS=Callistephus chinensis GN=CHS... [more]
CHS5_MEDSA7.771e-2471.43Chalcone synthase 4-2 OS=Medicago sativa GN=CHS4-2... [more]
CHS1_PEA7.771e-2472.86Chalcone synthase 1 OS=Pisum sativum GN=CHS1 PE=2 ... [more]
CHSY_DIAMO1.015e-2371.43Chalcone synthase OS=Dianthus monspessulanus GN=CH... [more]
CHS4_PEA1.015e-2371.43Chalcone synthase 4 OS=Pisum sativum GN=CHS4 PE=3 ... [more]

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Properties
Property NameValue
Genbank description10g2 Citrus sinensis flesh suppression subtractive hybridization (SSH) cDNA library Moro nucellare 58-8D-I cultivar Citrus sinensis cDNA clone Cl0010g2, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EG358250 ID=EG358250; Name=EG358250; organism=Citrus sinensis; type=EST; length=298bp
CCGGGCAGGTACCCGGGGATACAAATTTATAAAACATCAGAAGAGCTAGA
TAGGTCTCCGGGAACCGATCGATTGGAAACAACAAACAATGGTGACCGAC
TATGAATTTCGGAAGGCTCAACGGGACCAAGGTCCGGCCACGATCATGGA
CATTGGAACGGCAACTCCACCGAATTGTGTTGATCAAAGCACGTATCCGG
ATTATTATTTTCGCATCACAAATAGTGAACAGATGACTGATCTTAAAGAG
AAATTCAAGCGCATGTGTGACAAATCCATGATCAAGAAGCGATACATG
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