EG358250

Overview
NameEG358250
Unique NameEG358250
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length298
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EG358250 vs. ExPASy Swiss-Prot
Match: CHS2_DAUCA (Chalcone synthase 2 OS=Daucus carota GN=CHS2 PE=2 SV=1)

HSP 1 Score: 106.686 bits (265), Expect = 3.857e-23
Identity = 50/65 (76.92%), Postives = 55/65 (84.62%), Query Frame = 2
Query:  104 EFRKAQRDQGPATIMDIGTATPPNCVDQSTYPDYYFRITNSEQMTDLKEKFKRMCDKSMIKKRYM 298
            E RK QR QGPA I+ IGTATP NCV Q+ YPDYYFRITNSE M+DLK KFKRMC+KSMI+KRYM
Sbjct:   10 EIRKRQRAQGPANILAIGTATPSNCVYQADYPDYYFRITNSEHMSDLKLKFKRMCEKSMIRKRYM 74          
BLAST of EG358250 vs. ExPASy Swiss-Prot
Match: CHS1_SECCE (Chalcone synthase 1 OS=Secale cereale GN=CHS1 PE=3 SV=1)

HSP 1 Score: 106.686 bits (265), Expect = 3.857e-23
Identity = 49/69 (71.01%), Postives = 57/69 (82.61%), Query Frame = 2
Query:   92 VTDYEFRKAQRDQGPATIMDIGTATPPNCVDQSTYPDYYFRITNSEQMTDLKEKFKRMCDKSMIKKRYM 298
            +T  E RKAQR +GPAT++ IGTATP NCV Q+ YPDYYF+IT S+ M DLKEKFKRMCDKS I+KRYM
Sbjct:    5 MTVEEVRKAQRAEGPATVLAIGTATPANCVYQADYPDYYFKITKSDHMADLKEKFKRMCDKSQIRKRYM 73          
BLAST of EG358250 vs. ExPASy Swiss-Prot
Match: CHSY_PETCR (Chalcone synthase OS=Petroselinum crispum GN=CHS PE=3 SV=1)

HSP 1 Score: 106.301 bits (264), Expect = 5.037e-23
Identity = 50/65 (76.92%), Postives = 54/65 (83.08%), Query Frame = 2
Query:  104 EFRKAQRDQGPATIMDIGTATPPNCVDQSTYPDYYFRITNSEQMTDLKEKFKRMCDKSMIKKRYM 298
            E R  QR QGPA I+ IGTATP NCV Q+ YPDYYFRITNSE MTDLK KFKRMC+KSMI+KRYM
Sbjct:   11 EIRNRQRAQGPANILAIGTATPSNCVYQADYPDYYFRITNSEHMTDLKLKFKRMCEKSMIRKRYM 75          
BLAST of EG358250 vs. ExPASy Swiss-Prot
Match: CHSY_DIACA (Chalcone synthase OS=Dianthus caryophyllus GN=CHS PE=2 SV=1)

HSP 1 Score: 106.301 bits (264), Expect = 5.037e-23
Identity = 49/70 (70.00%), Postives = 57/70 (81.43%), Query Frame = 2
Query:   89 MVTDYEFRKAQRDQGPATIMDIGTATPPNCVDQSTYPDYYFRITNSEQMTDLKEKFKRMCDKSMIKKRYM 298
            M +  E R+A R  GPATI+ IGTATPPN + Q+ YPDYYFR+T SE MT+LKEKF+RMCDKSMIKKRYM
Sbjct:    1 MASIEEIRQAPRADGPATILAIGTATPPNAIYQADYPDYYFRVTKSEHMTELKEKFRRMCDKSMIKKRYM 70          
BLAST of EG358250 vs. ExPASy Swiss-Prot
Match: CHS6_TRISU (Chalcone synthase 6 OS=Trifolium subterraneum GN=CHS6 PE=2 SV=1)

HSP 1 Score: 106.301 bits (264), Expect = 5.037e-23
Identity = 50/70 (71.43%), Postives = 59/70 (84.29%), Query Frame = 2
Query:   89 MVTDYEFRKAQRDQGPATIMDIGTATPPNCVDQSTYPDYYFRITNSEQMTDLKEKFKRMCDKSMIKKRYM 298
            MV+  E RKAQR +GPATI+ IGTA P N V+Q+TYPD+YF+ITNSE  T+LKEKF+RMCDKSMIK RYM
Sbjct:    1 MVSVAEIRKAQRAEGPATILAIGTANPANKVEQATYPDFYFKITNSEHKTELKEKFQRMCDKSMIKSRYM 70          
BLAST of EG358250 vs. ExPASy Swiss-Prot
Match: CHSY_ARAAL (Chalcone synthase OS=Arabis alpina GN=CHS PE=3 SV=1)

HSP 1 Score: 105.531 bits (262), Expect = 8.592e-23
Identity = 50/65 (76.92%), Postives = 55/65 (84.62%), Query Frame = 2
Query:  104 EFRKAQRDQGPATIMDIGTATPPNCVDQSTYPDYYFRITNSEQMTDLKEKFKRMCDKSMIKKRYM 298
            E RKAQR  GPA I+ IGTA PPN V Q+ YPDYYFRITNS+ MTDLKEKFKRMCDKSMI+KR+M
Sbjct:    7 EIRKAQRADGPAGILGIGTANPPNHVLQAEYPDYYFRITNSDHMTDLKEKFKRMCDKSMIRKRHM 71          
BLAST of EG358250 vs. ExPASy Swiss-Prot
Match: CHS8_BROFI (Chalcone synthase 8 OS=Bromheadia finlaysoniana GN=CHS8 PE=2 SV=1)

HSP 1 Score: 105.145 bits (261), Expect = 1.122e-22
Identity = 47/65 (72.31%), Postives = 56/65 (86.15%), Query Frame = 2
Query:  104 EFRKAQRDQGPATIMDIGTATPPNCVDQSTYPDYYFRITNSEQMTDLKEKFKRMCDKSMIKKRYM 298
            E R+AQR +GPA ++ IGT+TPPN + Q+ YPDYYFRIT SE +T+LKEKFKRMCDKSMIKKRYM
Sbjct:    7 EIRQAQRAEGPAAVLAIGTSTPPNALYQADYPDYYFRITKSEHLTELKEKFKRMCDKSMIKKRYM 71          
BLAST of EG358250 vs. ExPASy Swiss-Prot
Match: CHS4_BROFI (Chalcone synthase 4 OS=Bromheadia finlaysoniana GN=CHS4 PE=2 SV=1)

HSP 1 Score: 105.145 bits (261), Expect = 1.122e-22
Identity = 47/65 (72.31%), Postives = 56/65 (86.15%), Query Frame = 2
Query:  104 EFRKAQRDQGPATIMDIGTATPPNCVDQSTYPDYYFRITNSEQMTDLKEKFKRMCDKSMIKKRYM 298
            E R+AQR +GPA ++ IGT+TPPN + Q+ YPDYYFRIT SE +T+LKEKFKRMCDKSMIKKRYM
Sbjct:    7 EIRQAQRAEGPAAVLAIGTSTPPNALYQADYPDYYFRITKSEHLTELKEKFKRMCDKSMIKKRYM 71          
BLAST of EG358250 vs. ExPASy Swiss-Prot
Match: CHS3_BROFI (Chalcone synthase 3 OS=Bromheadia finlaysoniana GN=CHS3 PE=2 SV=1)

HSP 1 Score: 105.145 bits (261), Expect = 1.122e-22
Identity = 47/65 (72.31%), Postives = 56/65 (86.15%), Query Frame = 2
Query:  104 EFRKAQRDQGPATIMDIGTATPPNCVDQSTYPDYYFRITNSEQMTDLKEKFKRMCDKSMIKKRYM 298
            E R+AQR +GPA ++ IGT+TPPN + Q+ YPDYYFRIT SE +T+LKEKFKRMCDKSMIKKRYM
Sbjct:    7 EIRQAQRAEGPAAVLAIGTSTPPNALYQADYPDYYFRITKSEHLTELKEKFKRMCDKSMIKKRYM 71          
BLAST of EG358250 vs. ExPASy Swiss-Prot
Match: CHSF_PETHY (Chalcone synthase F OS=Petunia hybrida GN=CHSF PE=2 SV=2)

HSP 1 Score: 104.76 bits (260), Expect = 1.466e-22
Identity = 48/70 (68.57%), Postives = 60/70 (85.71%), Query Frame = 2
Query:   89 MVTDYEFRKAQRDQGPATIMDIGTATPPNCVDQSTYPDYYFRITNSEQMTDLKEKFKRMCDKSMIKKRYM 298
            MV+  E R+AQR +GPATI+ IGTATP NCVDQ+TYPDY+FR+TNS+  T+LKEKFKRM ++SMIKK Y+
Sbjct:    1 MVSVEEVRRAQRREGPATILAIGTATPLNCVDQTTYPDYFFRVTNSDHKTELKEKFKRMFERSMIKKSYL 70          
The following BLAST results are available for this feature:
BLAST of EG358250 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 140
Match NameE-valueIdentityDescription
CHS2_DAUCA3.857e-2376.92Chalcone synthase 2 OS=Daucus carota GN=CHS2 PE=2 ... [more]
CHS1_SECCE3.857e-2371.01Chalcone synthase 1 OS=Secale cereale GN=CHS1 PE=3... [more]
CHSY_PETCR5.037e-2376.92Chalcone synthase OS=Petroselinum crispum GN=CHS P... [more]
CHSY_DIACA5.037e-2370.00Chalcone synthase OS=Dianthus caryophyllus GN=CHS ... [more]
CHS6_TRISU5.037e-2371.43Chalcone synthase 6 OS=Trifolium subterraneum GN=C... [more]
CHSY_ARAAL8.592e-2376.92Chalcone synthase OS=Arabis alpina GN=CHS PE=3 SV=... [more]
CHS8_BROFI1.122e-2272.31Chalcone synthase 8 OS=Bromheadia finlaysoniana GN... [more]
CHS4_BROFI1.122e-2272.31Chalcone synthase 4 OS=Bromheadia finlaysoniana GN... [more]
CHS3_BROFI1.122e-2272.31Chalcone synthase 3 OS=Bromheadia finlaysoniana GN... [more]
CHSF_PETHY1.466e-2268.57Chalcone synthase F OS=Petunia hybrida GN=CHSF PE=... [more]

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Properties
Property NameValue
Genbank description10g2 Citrus sinensis flesh suppression subtractive hybridization (SSH) cDNA library Moro nucellare 58-8D-I cultivar Citrus sinensis cDNA clone Cl0010g2, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EG358250 ID=EG358250; Name=EG358250; organism=Citrus sinensis; type=EST; length=298bp
CCGGGCAGGTACCCGGGGATACAAATTTATAAAACATCAGAAGAGCTAGA
TAGGTCTCCGGGAACCGATCGATTGGAAACAACAAACAATGGTGACCGAC
TATGAATTTCGGAAGGCTCAACGGGACCAAGGTCCGGCCACGATCATGGA
CATTGGAACGGCAACTCCACCGAATTGTGTTGATCAAAGCACGTATCCGG
ATTATTATTTTCGCATCACAAATAGTGAACAGATGACTGATCTTAAAGAG
AAATTCAAGCGCATGTGTGACAAATCCATGATCAAGAAGCGATACATG
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