EG358240

Overview
NameEG358240
Unique NameEG358240
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length331
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of EG358240 vs. ExPASy Swiss-Prot
Match: CHSY_PETCR (Chalcone synthase OS=Petroselinum crispum GN=CHS PE=3 SV=1)

HSP 1 Score: 117.087 bits (292), Expect = 2.842e-26
Identity = 57/69 (82.61%), Postives = 62/69 (89.86%), Query Frame = 2 
Query:    2 PRLGKEAATEAIKEWGQPKSKITHLVFCTTSGVDMPGADYRLTKLLGLRPSVKRLMMY-----AGNTVI 193
            PRLGKEAA++AIKEWGQPKSKITHL+FCTTSGVDMPGADY+LTKLLGLRPSVKR MMY     AG TV+
Sbjct:  108 PRLGKEAASKAIKEWGQPKSKITHLIFCTTSGVDMPGADYQLTKLLGLRPSVKRFMMYQQGCFAGGTVL 176
[Close]
BLAST of EG358240 vs. ExPASy Swiss-Prot
Match: CHSY_MATIN (Chalcone synthase OS=Matthiola incana GN=CHS PE=2 SV=1)

HSP 1 Score: 117.087 bits (292), Expect = 2.842e-26
Identity = 58/69 (84.06%), Postives = 61/69 (88.41%), Query Frame = 2 
Query:    2 PRLGKEAATEAIKEWGQPKSKITHLVFCTTSGVDMPGADYRLTKLLGLRPSVKRLMMY-----AGNTVI 193
            P+LGKEAA  AIKEWGQPKSKITHLVFCTTSGVDMPGADY+LTKLLGLRPSVKRLMMY     AG TV+
Sbjct:  107 PKLGKEAAVRAIKEWGQPKSKITHLVFCTTSGVDMPGADYQLTKLLGLRPSVKRLMMYQQGCFAGGTVL 175
[Close]
BLAST of EG358240 vs. ExPASy Swiss-Prot
Match: CHS6_SOYBN (Chalcone synthase 6 OS=Glycine max GN=CHS6 PE=3 SV=1)

HSP 1 Score: 117.087 bits (292), Expect = 2.842e-26
Identity = 57/69 (82.61%), Postives = 62/69 (89.86%), Query Frame = 2 
Query:    2 PRLGKEAATEAIKEWGQPKSKITHLVFCTTSGVDMPGADYRLTKLLGLRPSVKRLMMY-----AGNTVI 193
            P+LGKEAAT+AIKEWGQPKSKITHL+FCTTSGVDMPGADY+LTKLLGLRPSVKR MMY     AG TV+
Sbjct:  103 PKLGKEAATKAIKEWGQPKSKITHLIFCTTSGVDMPGADYQLTKLLGLRPSVKRYMMYQQGCFAGGTVL 171
[Close]
BLAST of EG358240 vs. ExPASy Swiss-Prot
Match: CHS5_SOYBN (Chalcone synthase 5 OS=Glycine max GN=CHS5 PE=3 SV=1)

HSP 1 Score: 117.087 bits (292), Expect = 2.842e-26
Identity = 57/69 (82.61%), Postives = 62/69 (89.86%), Query Frame = 2 
Query:    2 PRLGKEAATEAIKEWGQPKSKITHLVFCTTSGVDMPGADYRLTKLLGLRPSVKRLMMY-----AGNTVI 193
            P+LGKEAAT+AIKEWGQPKSKITHL+FCTTSGVDMPGADY+LTKLLGLRPSVKR MMY     AG TV+
Sbjct:  103 PKLGKEAATKAIKEWGQPKSKITHLIFCTTSGVDMPGADYQLTKLLGLRPSVKRYMMYQQGCFAGGTVL 171
[Close]
BLAST of EG358240 vs. ExPASy Swiss-Prot
Match: CHS3_SOYBN (Chalcone synthase 3 OS=Glycine max GN=CHS3 PE=3 SV=1)

HSP 1 Score: 117.087 bits (292), Expect = 2.842e-26
Identity = 57/69 (82.61%), Postives = 62/69 (89.86%), Query Frame = 2 
Query:    2 PRLGKEAATEAIKEWGQPKSKITHLVFCTTSGVDMPGADYRLTKLLGLRPSVKRLMMY-----AGNTVI 193
            P+LGKEAAT+AIKEWGQPKSKITHL+FCTTSGVDMPGADY+LTKLLGLRPSVKR MMY     AG TV+
Sbjct:  103 PKLGKEAATKAIKEWGQPKSKITHLIFCTTSGVDMPGADYQLTKLLGLRPSVKRYMMYQQGCFAGGTVL 171
[Close]
BLAST of EG358240 vs. ExPASy Swiss-Prot
Match: CHS2_SOYBN (Chalcone synthase 2 OS=Glycine max GN=CHS2 PE=3 SV=1)

HSP 1 Score: 117.087 bits (292), Expect = 2.842e-26
Identity = 57/69 (82.61%), Postives = 62/69 (89.86%), Query Frame = 2 
Query:    2 PRLGKEAATEAIKEWGQPKSKITHLVFCTTSGVDMPGADYRLTKLLGLRPSVKRLMMY-----AGNTVI 193
            P+LGKEAAT+AIKEWGQPKSKITHL+FCTTSGVDMPGADY+LTKLLGLRPSVKR MMY     AG TV+
Sbjct:  103 PKLGKEAATKAIKEWGQPKSKITHLIFCTTSGVDMPGADYQLTKLLGLRPSVKRYMMYQQGCFAGGTVL 171
[Close]
BLAST of EG358240 vs. ExPASy Swiss-Prot
Match: CHS1_SOYBN (Chalcone synthase 1 OS=Glycine max GN=CHS1 PE=3 SV=1)

HSP 1 Score: 117.087 bits (292), Expect = 2.842e-26
Identity = 57/69 (82.61%), Postives = 62/69 (89.86%), Query Frame = 2 
Query:    2 PRLGKEAATEAIKEWGQPKSKITHLVFCTTSGVDMPGADYRLTKLLGLRPSVKRLMMY-----AGNTVI 193
            P+LGKEAAT+AIKEWGQPKSKITHL+FCTTSGVDMPGADY+LTKLLGLRPSVKR MMY     AG TV+
Sbjct:  103 PKLGKEAATKAIKEWGQPKSKITHLIFCTTSGVDMPGADYQLTKLLGLRPSVKRYMMYQQGCFAGGTVL 171
[Close]
BLAST of EG358240 vs. ExPASy Swiss-Prot
Match: CHS1_CITSI (Chalcone synthase 1 OS=Citrus sinensis GN=CHS1 PE=2 SV=1)

HSP 1 Score: 117.087 bits (292), Expect = 2.842e-26
Identity = 61/69 (88.41%), Postives = 62/69 (89.86%), Query Frame = 2 
Query:    2 PRLGKEAATEAIKEWGQPKSKITHLVFCTTSGVDMPGADYRLTKLLGLRPSVKRLMMY-----AGNTVI 193
            PRLGK AATEAIKEWGQPKSKITHLVFCTTSGVDMPGADYRLTKLLGLRPSVKRLMMY     AG TV+
Sbjct:  103 PRLGK-AATEAIKEWGQPKSKITHLVFCTTSGVDMPGADYRLTKLLGLRPSVKRLMMYQQGCFAGGTVL 170
[Close]
BLAST of EG358240 vs. ExPASy Swiss-Prot
Match: CHSY_ANTMA (Chalcone synthase OS=Antirrhinum majus GN=CHS PE=3 SV=1)

HSP 1 Score: 116.701 bits (291), Expect = 3.712e-26
Identity = 58/69 (84.06%), Postives = 61/69 (88.41%), Query Frame = 2 
Query:    2 PRLGKEAATEAIKEWGQPKSKITHLVFCTTSGVDMPGADYRLTKLLGLRPSVKRLMMY-----AGNTVI 193
            PRLGKEAA +AIKEWGQPKSKITHLVFCTTSGVDMPGADY+LTKLLGLRPSVKR MMY     AG TV+
Sbjct:  103 PRLGKEAAQKAIKEWGQPKSKITHLVFCTTSGVDMPGADYQLTKLLGLRPSVKRFMMYQQGCFAGGTVL 171
[Close]
BLAST of EG358240 vs. ExPASy Swiss-Prot
Match: CHS2_SOLTU (Chalcone synthase 2 OS=Solanum tuberosum GN=CHS2 PE=2 SV=1)

HSP 1 Score: 116.701 bits (291), Expect = 3.712e-26
Identity = 58/69 (84.06%), Postives = 62/69 (89.86%), Query Frame = 2 
Query:    2 PRLGKEAATEAIKEWGQPKSKITHLVFCTTSGVDMPGADYRLTKLLGLRPSVKRLMMY-----AGNTVI 193
            P+LGKEAA +AIKEWGQPKSKITH+VFCTTSGVDMPGADY+LTKLLGLRPSVKRLMMY     AG TVI
Sbjct:  103 PKLGKEAAQKAIKEWGQPKSKITHVVFCTTSGVDMPGADYQLTKLLGLRPSVKRLMMYQQGCFAGGTVI 171
The following BLAST results are available for this feature:
BLAST of EG358240 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 142
Match NameE-valueIdentityDescription
CHSY_PETCR2.842e-2682.61Chalcone synthase OS=Petroselinum crispum GN=CHS P... [more]
CHSY_MATIN2.842e-2684.06Chalcone synthase OS=Matthiola incana GN=CHS PE=2 ... [more]
CHS6_SOYBN2.842e-2682.61Chalcone synthase 6 OS=Glycine max GN=CHS6 PE=3 SV... [more]
CHS5_SOYBN2.842e-2682.61Chalcone synthase 5 OS=Glycine max GN=CHS5 PE=3 SV... [more]
CHS3_SOYBN2.842e-2682.61Chalcone synthase 3 OS=Glycine max GN=CHS3 PE=3 SV... [more]
CHS2_SOYBN2.842e-2682.61Chalcone synthase 2 OS=Glycine max GN=CHS2 PE=3 SV... [more]
CHS1_SOYBN2.842e-2682.61Chalcone synthase 1 OS=Glycine max GN=CHS1 PE=3 SV... [more]
CHS1_CITSI2.842e-2688.41Chalcone synthase 1 OS=Citrus sinensis GN=CHS1 PE=... [more]
CHSY_ANTMA3.712e-2684.06Chalcone synthase OS=Antirrhinum majus GN=CHS PE=3... [more]
CHS2_SOLTU3.712e-2684.06Chalcone synthase 2 OS=Solanum tuberosum GN=CHS2 P... [more]

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Properties
Property NameValue
Genbank description12h4 Citrus sinensis flesh suppression subtractive hybridization (SSH) cDNA library Moro nucellare 58-8D-I cultivar Citrus sinensis cDNA clone Cl0012h4, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EG358240 ID=EG358240; Name=EG358240; organism=Citrus sinensis; type=EST; length=331bp
ACCGAGGCTCGGCAAAGAAGCGGCCACCGAGGCCATTAAAGAATGGGGCC
AGCCCAAGTCCAAAATCACCCACTTGGTCTTTTGCACCACTAGTGGAGTT
GACATGCCCGGGGCCGATTACCGGCTCACAAAACTATTGGGCCTTCGCCC
ATCCGTCAAACGTCTCATGATGTACGCGGGGAACACAGTCATTCCGTCTT
TCTATATCTTCTAGAAAATCCCGATGGCTTCTCGTTACGAAGTGGAAGTG
ACGATCACCTCCGCCAAGGACCTCAAGAACGTCAACTGGCGCCACGGCCC
CAACAGGCCGTACCTCGGCCGCGACCACGCT
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