EG358240

Overview
NameEG358240
Unique NameEG358240
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length331
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of EG358240 vs. ExPASy Swiss-Prot
Match: CHS2_SOLLC (Chalcone synthase 2 OS=Solanum lycopersicum GN=CHS2 PE=2 SV=2)

HSP 1 Score: 116.701 bits (291), Expect = 3.712e-26
Identity = 58/69 (84.06%), Postives = 62/69 (89.86%), Query Frame = 2 
Query:    2 PRLGKEAATEAIKEWGQPKSKITHLVFCTTSGVDMPGADYRLTKLLGLRPSVKRLMMY-----AGNTVI 193
            P+LGKEAA +AIKEWGQPKSKITH+VFCTTSGVDMPGADY+LTKLLGLRPSVKRLMMY     AG TVI
Sbjct:  103 PKLGKEAAQKAIKEWGQPKSKITHVVFCTTSGVDMPGADYQLTKLLGLRPSVKRLMMYQQGCFAGGTVI 171
[Close]
BLAST of EG358240 vs. ExPASy Swiss-Prot
Match: CHS2_CITSI (Chalcone synthase 2 OS=Citrus sinensis GN=CHS2 PE=2 SV=1)

HSP 1 Score: 116.701 bits (291), Expect = 3.712e-26
Identity = 56/69 (81.16%), Postives = 62/69 (89.86%), Query Frame = 2 
Query:    2 PRLGKEAATEAIKEWGQPKSKITHLVFCTTSGVDMPGADYRLTKLLGLRPSVKRLMMY-----AGNTVI 193
            P+LGKEAAT+AIKEWGQPKSKITHL+FCTTSGVDMPGADY+LTKL+GLRPSVKR MMY     AG TV+
Sbjct:  103 PKLGKEAATKAIKEWGQPKSKITHLIFCTTSGVDMPGADYQLTKLIGLRPSVKRFMMYQQGCFAGGTVL 171
[Close]
BLAST of EG358240 vs. ExPASy Swiss-Prot
Match: CHSY_VITVI (Chalcone synthase OS=Vitis vinifera GN=CHS PE=2 SV=1)

HSP 1 Score: 116.316 bits (290), Expect = 4.848e-26
Identity = 57/69 (82.61%), Postives = 62/69 (89.86%), Query Frame = 2 
Query:    2 PRLGKEAATEAIKEWGQPKSKITHLVFCTTSGVDMPGADYRLTKLLGLRPSVKRLMMY-----AGNTVI 193
            P+LGKEAA +AIKEWGQPKSKITHLVFCTTSGVDMPGADY+LTKLLGL+PSVKRLMMY     AG TV+
Sbjct:  103 PKLGKEAAAKAIKEWGQPKSKITHLVFCTTSGVDMPGADYQLTKLLGLKPSVKRLMMYQQGCFAGGTVL 171
[Close]
BLAST of EG358240 vs. ExPASy Swiss-Prot
Match: CHSY_RAPSA (Chalcone synthase OS=Raphanus sativus GN=CHS PE=2 SV=1)

HSP 1 Score: 116.316 bits (290), Expect = 4.848e-26
Identity = 57/69 (82.61%), Postives = 62/69 (89.86%), Query Frame = 2 
Query:    2 PRLGKEAATEAIKEWGQPKSKITHLVFCTTSGVDMPGADYRLTKLLGLRPSVKRLMMY-----AGNTVI 193
            P+LGKEAA +AIKEWGQPKSKITH+VFCTTSGVDMPGADY+LTKLLGLRPSVKRLMMY     AG TV+
Sbjct:  107 PKLGKEAAVKAIKEWGQPKSKITHVVFCTTSGVDMPGADYQLTKLLGLRPSVKRLMMYQQGCFAGGTVL 175
[Close]
BLAST of EG358240 vs. ExPASy Swiss-Prot
Match: CHSY_ARATH (Chalcone synthase OS=Arabidopsis thaliana GN=CHS PE=1 SV=1)

HSP 1 Score: 116.316 bits (290), Expect = 4.848e-26
Identity = 57/69 (82.61%), Postives = 62/69 (89.86%), Query Frame = 2 
Query:    2 PRLGKEAATEAIKEWGQPKSKITHLVFCTTSGVDMPGADYRLTKLLGLRPSVKRLMMY-----AGNTVI 193
            P+LGKEAA +AIKEWGQPKSKITH+VFCTTSGVDMPGADY+LTKLLGLRPSVKRLMMY     AG TV+
Sbjct:  108 PKLGKEAAVKAIKEWGQPKSKITHVVFCTTSGVDMPGADYQLTKLLGLRPSVKRLMMYQQGCFAGGTVL 176
[Close]
BLAST of EG358240 vs. ExPASy Swiss-Prot
Match: CHSY_ARAAL (Chalcone synthase OS=Arabis alpina GN=CHS PE=3 SV=1)

HSP 1 Score: 116.316 bits (290), Expect = 4.848e-26
Identity = 57/69 (82.61%), Postives = 62/69 (89.86%), Query Frame = 2 
Query:    2 PRLGKEAATEAIKEWGQPKSKITHLVFCTTSGVDMPGADYRLTKLLGLRPSVKRLMMY-----AGNTVI 193
            P+LGKEAA +AIKEWGQPKSKITH+VFCTTSGVDMPGADY+LTKLLGLRPSVKRLMMY     AG TV+
Sbjct:  104 PKLGKEAAVKAIKEWGQPKSKITHVVFCTTSGVDMPGADYQLTKLLGLRPSVKRLMMYQQGCFAGGTVL 172
[Close]
BLAST of EG358240 vs. ExPASy Swiss-Prot
Match: CHS3_SINAL (Chalcone synthase 3 OS=Sinapis alba GN=CHS3 PE=2 SV=1)

HSP 1 Score: 116.316 bits (290), Expect = 4.848e-26
Identity = 57/69 (82.61%), Postives = 62/69 (89.86%), Query Frame = 2 
Query:    2 PRLGKEAATEAIKEWGQPKSKITHLVFCTTSGVDMPGADYRLTKLLGLRPSVKRLMMY-----AGNTVI 193
            P+LGKEAA +AIKEWGQPKSKITH+VFCTTSGVDMPGADY+LTKLLGLRPSVKRLMMY     AG TV+
Sbjct:  108 PKLGKEAAVKAIKEWGQPKSKITHVVFCTTSGVDMPGADYQLTKLLGLRPSVKRLMMYQQGCFAGGTVL 176
[Close]
BLAST of EG358240 vs. ExPASy Swiss-Prot
Match: CHS3_GERHY (Chalcone synthase 3 OS=Gerbera hybrida GN=CHS3 PE=2 SV=1)

HSP 1 Score: 116.316 bits (290), Expect = 4.848e-26
Identity = 58/69 (84.06%), Postives = 62/69 (89.86%), Query Frame = 2 
Query:    2 PRLGKEAATEAIKEWGQPKSKITHLVFCTTSGVDMPGADYRLTKLLGLRPSVKRLMMY-----AGNTVI 193
            P+LGKEAAT+AIKEWG PKSKITHLVFCTTSGVDMPGADY+LTKLLGLRPSVKRLMMY     AG TV+
Sbjct:  109 PKLGKEAATKAIKEWGFPKSKITHLVFCTTSGVDMPGADYQLTKLLGLRPSVKRLMMYQQGCFAGGTVL 177
[Close]
BLAST of EG358240 vs. ExPASy Swiss-Prot
Match: CHS1_SINAL (Chalcone synthase 1 OS=Sinapis alba GN=CHS1 PE=2 SV=1)

HSP 1 Score: 116.316 bits (290), Expect = 4.848e-26
Identity = 57/69 (82.61%), Postives = 62/69 (89.86%), Query Frame = 2 
Query:    2 PRLGKEAATEAIKEWGQPKSKITHLVFCTTSGVDMPGADYRLTKLLGLRPSVKRLMMY-----AGNTVI 193
            P+LGKEAA +AIKEWGQPKSKITH+VFCTTSGVDMPGADY+LTKLLGLRPSVKRLMMY     AG TV+
Sbjct:  108 PKLGKEAAVKAIKEWGQPKSKITHVVFCTTSGVDMPGADYQLTKLLGLRPSVKRLMMYQQGCFAGGTVL 176
[Close]
BLAST of EG358240 vs. ExPASy Swiss-Prot
Match: CHSY_PINSY (Chalcone synthase OS=Pinus sylvestris GN=CHS PE=3 SV=1)

HSP 1 Score: 115.931 bits (289), Expect = 6.331e-26
Identity = 56/69 (81.16%), Postives = 62/69 (89.86%), Query Frame = 2 
Query:    2 PRLGKEAATEAIKEWGQPKSKITHLVFCTTSGVDMPGADYRLTKLLGLRPSVKRLMMY-----AGNTVI 193
            PRLGKEAA +AIKEWGQPKSKITH++FCTTSGVDMPGADY+LTKLLGLRPSVKR+MMY     AG TV+
Sbjct:  108 PRLGKEAAAKAIKEWGQPKSKITHVIFCTTSGVDMPGADYQLTKLLGLRPSVKRVMMYQQGCFAGGTVL 176
The following BLAST results are available for this feature:
BLAST of EG358240 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 142
Match NameE-valueIdentityDescription
CHS2_SOLLC3.712e-2684.06Chalcone synthase 2 OS=Solanum lycopersicum GN=CHS... [more]
CHS2_CITSI3.712e-2681.16Chalcone synthase 2 OS=Citrus sinensis GN=CHS2 PE=... [more]
CHSY_VITVI4.848e-2682.61Chalcone synthase OS=Vitis vinifera GN=CHS PE=2 SV... [more]
CHSY_RAPSA4.848e-2682.61Chalcone synthase OS=Raphanus sativus GN=CHS PE=2 ... [more]
CHSY_ARATH4.848e-2682.61Chalcone synthase OS=Arabidopsis thaliana GN=CHS P... [more]
CHSY_ARAAL4.848e-2682.61Chalcone synthase OS=Arabis alpina GN=CHS PE=3 SV=... [more]
CHS3_SINAL4.848e-2682.61Chalcone synthase 3 OS=Sinapis alba GN=CHS3 PE=2 S... [more]
CHS3_GERHY4.848e-2684.06Chalcone synthase 3 OS=Gerbera hybrida GN=CHS3 PE=... [more]
CHS1_SINAL4.848e-2682.61Chalcone synthase 1 OS=Sinapis alba GN=CHS1 PE=2 S... [more]
CHSY_PINSY6.331e-2681.16Chalcone synthase OS=Pinus sylvestris GN=CHS PE=3 ... [more]

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Properties
Property NameValue
Genbank description12h4 Citrus sinensis flesh suppression subtractive hybridization (SSH) cDNA library Moro nucellare 58-8D-I cultivar Citrus sinensis cDNA clone Cl0012h4, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EG358240 ID=EG358240; Name=EG358240; organism=Citrus sinensis; type=EST; length=331bp
ACCGAGGCTCGGCAAAGAAGCGGCCACCGAGGCCATTAAAGAATGGGGCC
AGCCCAAGTCCAAAATCACCCACTTGGTCTTTTGCACCACTAGTGGAGTT
GACATGCCCGGGGCCGATTACCGGCTCACAAAACTATTGGGCCTTCGCCC
ATCCGTCAAACGTCTCATGATGTACGCGGGGAACACAGTCATTCCGTCTT
TCTATATCTTCTAGAAAATCCCGATGGCTTCTCGTTACGAAGTGGAAGTG
ACGATCACCTCCGCCAAGGACCTCAAGAACGTCAACTGGCGCCACGGCCC
CAACAGGCCGTACCTCGGCCGCGACCACGCT
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