EG358240

Overview
NameEG358240
Unique NameEG358240
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length331
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of EG358240 vs. ExPASy Swiss-Prot
Match: CHSE_IPONI (Chalcone synthase E OS=Ipomoea nil GN=CHSE PE=2 SV=1)

HSP 1 Score: 114.775 bits (286), Expect = 1.410e-25
Identity = 57/69 (82.61%), Postives = 61/69 (88.41%), Query Frame = 2 
Query:    2 PRLGKEAATEAIKEWGQPKSKITHLVFCTTSGVDMPGADYRLTKLLGLRPSVKRLMMY-----AGNTVI 193
            P+LGKEAA +AIKEWGQPKSKITHLVFCTTSGVDMPGADY+LTKLLGL+PSVKR MMY     AG TVI
Sbjct:  103 PKLGKEAAQKAIKEWGQPKSKITHLVFCTTSGVDMPGADYQLTKLLGLQPSVKRFMMYQQGCFAGGTVI 171
[Close]
BLAST of EG358240 vs. ExPASy Swiss-Prot
Match: CHSA_PEA (Chalcone synthase 1A OS=Pisum sativum GN=CHS-1A PE=3 SV=1)

HSP 1 Score: 114.775 bits (286), Expect = 1.410e-25
Identity = 56/69 (81.16%), Postives = 61/69 (88.41%), Query Frame = 2 
Query:    2 PRLGKEAATEAIKEWGQPKSKITHLVFCTTSGVDMPGADYRLTKLLGLRPSVKRLMMY-----AGNTVI 193
            P+LGKEAAT+AIKEWGQPKSKITHL+FCTTSGVDMPGADY+LTKLLGLRP VKR MMY     AG TV+
Sbjct:  103 PKLGKEAATKAIKEWGQPKSKITHLIFCTTSGVDMPGADYQLTKLLGLRPYVKRYMMYQQGCFAGGTVL 171
[Close]
BLAST of EG358240 vs. ExPASy Swiss-Prot
Match: CHS2_DAUCA (Chalcone synthase 2 OS=Daucus carota GN=CHS2 PE=2 SV=1)

HSP 1 Score: 114.775 bits (286), Expect = 1.410e-25
Identity = 56/69 (81.16%), Postives = 60/69 (86.96%), Query Frame = 2 
Query:    2 PRLGKEAATEAIKEWGQPKSKITHLVFCTTSGVDMPGADYRLTKLLGLRPSVKRLMMY-----AGNTVI 193
            PRLGKEAA +AIKEWG PKSKITHL+FCTTSGVDMPGADY+LTKLLGLRPSVKR MMY     AG TV+
Sbjct:  107 PRLGKEAAAKAIKEWGHPKSKITHLIFCTTSGVDMPGADYQLTKLLGLRPSVKRFMMYQQGCFAGGTVL 175
[Close]
BLAST of EG358240 vs. ExPASy Swiss-Prot
Match: CHS1_DAUCA (Chalcone synthase 1 OS=Daucus carota GN=CHS1 PE=2 SV=1)

HSP 1 Score: 114.775 bits (286), Expect = 1.410e-25
Identity = 56/69 (81.16%), Postives = 60/69 (86.96%), Query Frame = 2 
Query:    2 PRLGKEAATEAIKEWGQPKSKITHLVFCTTSGVDMPGADYRLTKLLGLRPSVKRLMMY-----AGNTVI 193
            P+LGKEAA  AIKEWGQPKSKITHL+FCTTSGVDMPGAD+RLTKLLGLRPSVKR MMY     AG TV+
Sbjct:  103 PKLGKEAALRAIKEWGQPKSKITHLIFCTTSGVDMPGADFRLTKLLGLRPSVKRFMMYQQGCFAGGTVL 171
[Close]
BLAST of EG358240 vs. ExPASy Swiss-Prot
Match: CHSY_VIGUN (Chalcone synthase OS=Vigna unguiculata GN=CHS PE=2 SV=1)

HSP 1 Score: 114.005 bits (284), Expect = 2.406e-25
Identity = 56/69 (81.16%), Postives = 60/69 (86.96%), Query Frame = 2 
Query:    2 PRLGKEAATEAIKEWGQPKSKITHLVFCTTSGVDMPGADYRLTKLLGLRPSVKRLMMY-----AGNTVI 193
            PRLGKEAA +AIKEWGQPKSKITHL+FCTTSGVDMPGADY+LTKLLGLRP VKR MMY     AG TV+
Sbjct:  103 PRLGKEAAVKAIKEWGQPKSKITHLIFCTTSGVDMPGADYQLTKLLGLRPYVKRYMMYQQGCFAGGTVL 171
[Close]
BLAST of EG358240 vs. ExPASy Swiss-Prot
Match: CHSJ_PETHY (Chalcone synthase J OS=Petunia hybrida GN=CHSJ PE=2 SV=2)

HSP 1 Score: 114.005 bits (284), Expect = 2.406e-25
Identity = 57/69 (82.61%), Postives = 61/69 (88.41%), Query Frame = 2 
Query:    2 PRLGKEAATEAIKEWGQPKSKITHLVFCTTSGVDMPGADYRLTKLLGLRPSVKRLMMY-----AGNTVI 193
            P+LGKEAA +AIKEWGQPKSKITHLVFCTTSGVDMPGADY+LTKLLGLR SVKRLMMY     AG TV+
Sbjct:  103 PKLGKEAAQKAIKEWGQPKSKITHLVFCTTSGVDMPGADYQLTKLLGLRSSVKRLMMYQQGCFAGGTVL 171
[Close]
BLAST of EG358240 vs. ExPASy Swiss-Prot
Match: CHS9_MEDSA (Chalcone synthase 9 OS=Medicago sativa GN=CHS9 PE=2 SV=1)

HSP 1 Score: 114.005 bits (284), Expect = 2.406e-25
Identity = 56/69 (81.16%), Postives = 60/69 (86.96%), Query Frame = 2 
Query:    2 PRLGKEAATEAIKEWGQPKSKITHLVFCTTSGVDMPGADYRLTKLLGLRPSVKRLMMY-----AGNTVI 193
            PRLGKEAA +AIKEWGQPKSKITHL+FCTTSGVDMPGADY+LTKLLGLRP VKR MMY     AG TV+
Sbjct:  103 PRLGKEAAVKAIKEWGQPKSKITHLIFCTTSGVDMPGADYQLTKLLGLRPYVKRYMMYQQGCFAGGTVL 171
[Close]
BLAST of EG358240 vs. ExPASy Swiss-Prot
Match: CHS6_TRISU (Chalcone synthase 6 OS=Trifolium subterraneum GN=CHS6 PE=2 SV=1)

HSP 1 Score: 114.005 bits (284), Expect = 2.406e-25
Identity = 56/69 (81.16%), Postives = 60/69 (86.96%), Query Frame = 2 
Query:    2 PRLGKEAATEAIKEWGQPKSKITHLVFCTTSGVDMPGADYRLTKLLGLRPSVKRLMMY-----AGNTVI 193
            PRLGKEAA +AIKEWGQPKSKITHL+FCTTSGVDMPGADY+LTKLLGLRP VKR MMY     AG TV+
Sbjct:  103 PRLGKEAAVKAIKEWGQPKSKITHLIFCTTSGVDMPGADYQLTKLLGLRPYVKRYMMYQQGCFAGGTVL 171
[Close]
BLAST of EG358240 vs. ExPASy Swiss-Prot
Match: CHS6_PEA (Chalcone synthase 6 OS=Pisum sativum GN=CHS6 PE=2 SV=1)

HSP 1 Score: 114.005 bits (284), Expect = 2.406e-25
Identity = 56/69 (81.16%), Postives = 60/69 (86.96%), Query Frame = 2 
Query:    2 PRLGKEAATEAIKEWGQPKSKITHLVFCTTSGVDMPGADYRLTKLLGLRPSVKRLMMY-----AGNTVI 193
            PRLGKEAA +AIKEWGQPKSKITHL+FCTTSGVDMPGADY+LTKLLGLRP VKR MMY     AG TV+
Sbjct:  103 PRLGKEAAVKAIKEWGQPKSKITHLIFCTTSGVDMPGADYQLTKLLGLRPYVKRYMMYQQGCFAGGTVL 171
[Close]
BLAST of EG358240 vs. ExPASy Swiss-Prot
Match: CHS5_TRISU (Chalcone synthase 5 OS=Trifolium subterraneum GN=CHS5 PE=2 SV=1)

HSP 1 Score: 114.005 bits (284), Expect = 2.406e-25
Identity = 56/69 (81.16%), Postives = 60/69 (86.96%), Query Frame = 2 
Query:    2 PRLGKEAATEAIKEWGQPKSKITHLVFCTTSGVDMPGADYRLTKLLGLRPSVKRLMMY-----AGNTVI 193
            PRLGKEAA +AIKEWGQPKSKITHL+FCTTSGVDMPGADY+LTKLLGLRP VKR MMY     AG TV+
Sbjct:  103 PRLGKEAAVKAIKEWGQPKSKITHLIFCTTSGVDMPGADYQLTKLLGLRPYVKRYMMYQQGCFAGGTVL 171
The following BLAST results are available for this feature:
BLAST of EG358240 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 142
Match NameE-valueIdentityDescription
CHSE_IPONI1.410e-2582.61Chalcone synthase E OS=Ipomoea nil GN=CHSE PE=2 SV... [more]
CHSA_PEA1.410e-2581.16Chalcone synthase 1A OS=Pisum sativum GN=CHS-1A PE... [more]
CHS2_DAUCA1.410e-2581.16Chalcone synthase 2 OS=Daucus carota GN=CHS2 PE=2 ... [more]
CHS1_DAUCA1.410e-2581.16Chalcone synthase 1 OS=Daucus carota GN=CHS1 PE=2 ... [more]
CHSY_VIGUN2.406e-2581.16Chalcone synthase OS=Vigna unguiculata GN=CHS PE=2... [more]
CHSJ_PETHY2.406e-2582.61Chalcone synthase J OS=Petunia hybrida GN=CHSJ PE=... [more]
CHS9_MEDSA2.406e-2581.16Chalcone synthase 9 OS=Medicago sativa GN=CHS9 PE=... [more]
CHS6_TRISU2.406e-2581.16Chalcone synthase 6 OS=Trifolium subterraneum GN=C... [more]
CHS6_PEA2.406e-2581.16Chalcone synthase 6 OS=Pisum sativum GN=CHS6 PE=2 ... [more]
CHS5_TRISU2.406e-2581.16Chalcone synthase 5 OS=Trifolium subterraneum GN=C... [more]

Pages

back to top
Properties
Property NameValue
Genbank description12h4 Citrus sinensis flesh suppression subtractive hybridization (SSH) cDNA library Moro nucellare 58-8D-I cultivar Citrus sinensis cDNA clone Cl0012h4, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EG358240 ID=EG358240; Name=EG358240; organism=Citrus sinensis; type=EST; length=331bp
ACCGAGGCTCGGCAAAGAAGCGGCCACCGAGGCCATTAAAGAATGGGGCC
AGCCCAAGTCCAAAATCACCCACTTGGTCTTTTGCACCACTAGTGGAGTT
GACATGCCCGGGGCCGATTACCGGCTCACAAAACTATTGGGCCTTCGCCC
ATCCGTCAAACGTCTCATGATGTACGCGGGGAACACAGTCATTCCGTCTT
TCTATATCTTCTAGAAAATCCCGATGGCTTCTCGTTACGAAGTGGAAGTG
ACGATCACCTCCGCCAAGGACCTCAAGAACGTCAACTGGCGCCACGGCCC
CAACAGGCCGTACCTCGGCCGCGACCACGCT
back to top