EG358240

Overview
NameEG358240
Unique NameEG358240
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length331
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of EG358240 vs. ExPASy Swiss-Prot
Match: CHS1_TRISU (Chalcone synthase 1 OS=Trifolium subterraneum GN=CHS1 PE=3 SV=1)

HSP 1 Score: 114.005 bits (284), Expect = 2.406e-25
Identity = 56/69 (81.16%), Postives = 60/69 (86.96%), Query Frame = 2 
Query:    2 PRLGKEAATEAIKEWGQPKSKITHLVFCTTSGVDMPGADYRLTKLLGLRPSVKRLMMY-----AGNTVI 193
            PRLGKEAA +AIKEWGQPKSKITHL+FCTTSGVDMPGADY+LTKLLGLRP VKR MMY     AG TV+
Sbjct:  103 PRLGKEAAVKAIKEWGQPKSKITHLIFCTTSGVDMPGADYQLTKLLGLRPYVKRYMMYQQGCFAGGTVL 171
[Close]
BLAST of EG358240 vs. ExPASy Swiss-Prot
Match: CHS1_RUTGR (Chalcone synthase 1 OS=Ruta graveolens GN=CHS1 PE=2 SV=1)

HSP 1 Score: 114.005 bits (284), Expect = 2.406e-25
Identity = 55/69 (79.71%), Postives = 60/69 (86.96%), Query Frame = 2 
Query:    2 PRLGKEAATEAIKEWGQPKSKITHLVFCTTSGVDMPGADYRLTKLLGLRPSVKRLMMY-----AGNTVI 193
            P+LGKEAA +AIKEWGQPKSKITHL+FCTTSGVDMPG DY+LTKLLGLRPSVKR MMY     AG TV+
Sbjct:  105 PKLGKEAAVKAIKEWGQPKSKITHLIFCTTSGVDMPGCDYQLTKLLGLRPSVKRFMMYQQGCFAGGTVL 173
[Close]
BLAST of EG358240 vs. ExPASy Swiss-Prot
Match: CHS1_PEA (Chalcone synthase 1 OS=Pisum sativum GN=CHS1 PE=2 SV=1)

HSP 1 Score: 114.005 bits (284), Expect = 2.406e-25
Identity = 56/69 (81.16%), Postives = 60/69 (86.96%), Query Frame = 2 
Query:    2 PRLGKEAATEAIKEWGQPKSKITHLVFCTTSGVDMPGADYRLTKLLGLRPSVKRLMMY-----AGNTVI 193
            PRLGKEAA +AIKEWGQPKSKITHL+FCTTSGVDMPGADY+LTKLLGLRP VKR MMY     AG TV+
Sbjct:  103 PRLGKEAAVKAIKEWGQPKSKITHLIFCTTSGVDMPGADYQLTKLLGLRPYVKRYMMYQQGCFAGGTVL 171
[Close]
BLAST of EG358240 vs. ExPASy Swiss-Prot
Match: CHS1_MEDSA (Chalcone synthase 1 OS=Medicago sativa GN=CHS1 PE=2 SV=1)

HSP 1 Score: 114.005 bits (284), Expect = 2.406e-25
Identity = 56/69 (81.16%), Postives = 60/69 (86.96%), Query Frame = 2 
Query:    2 PRLGKEAATEAIKEWGQPKSKITHLVFCTTSGVDMPGADYRLTKLLGLRPSVKRLMMY-----AGNTVI 193
            PRLGKEAA +AIKEWGQPKSKITHL+FCTTSGVDMPGADY+LTKLLGLRP VKR MMY     AG TV+
Sbjct:  103 PRLGKEAAVKAIKEWGQPKSKITHLIFCTTSGVDMPGADYQLTKLLGLRPYVKRYMMYQQGCFAGGTVL 171
[Close]
BLAST of EG358240 vs. ExPASy Swiss-Prot
Match: CHS1_CICAR (Chalcone synthase 1 OS=Cicer arietinum GN=CHS1 PE=2 SV=1)

HSP 1 Score: 114.005 bits (284), Expect = 2.406e-25
Identity = 56/69 (81.16%), Postives = 60/69 (86.96%), Query Frame = 2 
Query:    2 PRLGKEAATEAIKEWGQPKSKITHLVFCTTSGVDMPGADYRLTKLLGLRPSVKRLMMY-----AGNTVI 193
            PRLGKEAA +AIKEWGQPKSKITHL+FCTTSGVDMPGADY+LTKLLGLRP VKR MMY     AG TV+
Sbjct:  103 PRLGKEAAVKAIKEWGQPKSKITHLIFCTTSGVDMPGADYQLTKLLGLRPYVKRYMMYQQGCFAGGTVL 171
[Close]
BLAST of EG358240 vs. ExPASy Swiss-Prot
Match: CHSB_SOLTU (Chalcone synthase 1B OS=Solanum tuberosum GN=CHS1B PE=2 SV=1)

HSP 1 Score: 113.62 bits (283), Expect = 3.142e-25
Identity = 56/69 (81.16%), Postives = 60/69 (86.96%), Query Frame = 2 
Query:    2 PRLGKEAATEAIKEWGQPKSKITHLVFCTTSGVDMPGADYRLTKLLGLRPSVKRLMMY-----AGNTVI 193
            P+LGKEAA +AIKEWGQPKSKITHLVFCTTSGVDMPG DY+L KLLGLRPSVKRLMMY     AG TV+
Sbjct:  103 PKLGKEAAQKAIKEWGQPKSKITHLVFCTTSGVDMPGCDYQLAKLLGLRPSVKRLMMYQQGCFAGGTVL 171
[Close]
BLAST of EG358240 vs. ExPASy Swiss-Prot
Match: CHS7_IPOBA (Chalcone synthase DIII OS=Ipomoea batatas GN=CHS-DIII PE=2 SV=1)

HSP 1 Score: 113.62 bits (283), Expect = 3.142e-25
Identity = 56/69 (81.16%), Postives = 60/69 (86.96%), Query Frame = 2 
Query:    2 PRLGKEAATEAIKEWGQPKSKITHLVFCTTSGVDMPGADYRLTKLLGLRPSVKRLMMY-----AGNTVI 193
            P+LGKEAA  AIKEWGQPKSKITH+ FCTTSGVDMPGADY+LTKLLGLRPSVKRLMMY     AG TV+
Sbjct:  103 PKLGKEAAQSAIKEWGQPKSKITHVFFCTTSGVDMPGADYQLTKLLGLRPSVKRLMMYQQGCFAGGTVL 171
[Close]
BLAST of EG358240 vs. ExPASy Swiss-Prot
Match: CHSY_EQUAR (Chalcone synthase OS=Equisetum arvense GN=CHS PE=2 SV=1)

HSP 1 Score: 113.235 bits (282), Expect = 4.104e-25
Identity = 56/69 (81.16%), Postives = 61/69 (88.41%), Query Frame = 2 
Query:    2 PRLGKEAATEAIKEWGQPKSKITHLVFCTTSGVDMPGADYRLTKLLGLRPSVKRLMMY-----AGNTVI 193
            P+LGKEA+ +AIKEWGQPKSKITHLVFCTTSGVDMPGAD+ LTKLLGLRPSVKRLMMY     AG TV+
Sbjct:  109 PKLGKEASLKAIKEWGQPKSKITHLVFCTTSGVDMPGADWALTKLLGLRPSVKRLMMYQQGCFAGGTVL 177
[Close]
BLAST of EG358240 vs. ExPASy Swiss-Prot
Match: CHS9_DAUCA (Chalcone synthase 9 OS=Daucus carota GN=CHS9 PE=2 SV=1)

HSP 1 Score: 113.235 bits (282), Expect = 4.104e-25
Identity = 55/69 (79.71%), Postives = 60/69 (86.96%), Query Frame = 2 
Query:    2 PRLGKEAATEAIKEWGQPKSKITHLVFCTTSGVDMPGADYRLTKLLGLRPSVKRLMMY-----AGNTVI 193
            P+LGKEAA  AIKEWG+PKSKITHL+FCTTSGVDMPGAD+RLTKLLGLRPSVKR MMY     AG TV+
Sbjct:  103 PKLGKEAALRAIKEWGRPKSKITHLIFCTTSGVDMPGADFRLTKLLGLRPSVKRFMMYQQGCFAGGTVL 171
[Close]
BLAST of EG358240 vs. ExPASy Swiss-Prot
Match: CHS2_PEA (Chalcone synthase 2 OS=Pisum sativum GN=CHS2 PE=2 SV=1)

HSP 1 Score: 113.235 bits (282), Expect = 4.104e-25
Identity = 56/68 (82.35%), Postives = 59/68 (86.76%), Query Frame = 2 
Query:    2 PRLGKEAATEAIKEWGQPKSKITHLVFCTTSGVDMPGADYRLTKLLGLRPSVKRLMMY-----AGNTV 190
            PRLGKEAA +AIKEWGQPKSKITHL+FCTTSGVDMPGADY+LTKLLGLRP VKR MMY     AG TV
Sbjct:  103 PRLGKEAAVKAIKEWGQPKSKITHLIFCTTSGVDMPGADYQLTKLLGLRPYVKRYMMYQQGCFAGGTV 170
The following BLAST results are available for this feature:
BLAST of EG358240 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 142
Match NameE-valueIdentityDescription
CHS1_TRISU2.406e-2581.16Chalcone synthase 1 OS=Trifolium subterraneum GN=C... [more]
CHS1_RUTGR2.406e-2579.71Chalcone synthase 1 OS=Ruta graveolens GN=CHS1 PE=... [more]
CHS1_PEA2.406e-2581.16Chalcone synthase 1 OS=Pisum sativum GN=CHS1 PE=2 ... [more]
CHS1_MEDSA2.406e-2581.16Chalcone synthase 1 OS=Medicago sativa GN=CHS1 PE=... [more]
CHS1_CICAR2.406e-2581.16Chalcone synthase 1 OS=Cicer arietinum GN=CHS1 PE=... [more]
CHSB_SOLTU3.142e-2581.16Chalcone synthase 1B OS=Solanum tuberosum GN=CHS1B... [more]
CHS7_IPOBA3.142e-2581.16Chalcone synthase DIII OS=Ipomoea batatas GN=CHS-D... [more]
CHSY_EQUAR4.104e-2581.16Chalcone synthase OS=Equisetum arvense GN=CHS PE=2... [more]
CHS9_DAUCA4.104e-2579.71Chalcone synthase 9 OS=Daucus carota GN=CHS9 PE=2 ... [more]
CHS2_PEA4.104e-2582.35Chalcone synthase 2 OS=Pisum sativum GN=CHS2 PE=2 ... [more]

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Properties
Property NameValue
Genbank description12h4 Citrus sinensis flesh suppression subtractive hybridization (SSH) cDNA library Moro nucellare 58-8D-I cultivar Citrus sinensis cDNA clone Cl0012h4, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EG358240 ID=EG358240; Name=EG358240; organism=Citrus sinensis; type=EST; length=331bp
ACCGAGGCTCGGCAAAGAAGCGGCCACCGAGGCCATTAAAGAATGGGGCC
AGCCCAAGTCCAAAATCACCCACTTGGTCTTTTGCACCACTAGTGGAGTT
GACATGCCCGGGGCCGATTACCGGCTCACAAAACTATTGGGCCTTCGCCC
ATCCGTCAAACGTCTCATGATGTACGCGGGGAACACAGTCATTCCGTCTT
TCTATATCTTCTAGAAAATCCCGATGGCTTCTCGTTACGAAGTGGAAGTG
ACGATCACCTCCGCCAAGGACCTCAAGAACGTCAACTGGCGCCACGGCCC
CAACAGGCCGTACCTCGGCCGCGACCACGCT
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