EG358240

Overview
NameEG358240
Unique NameEG358240
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length331
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EG358240 vs. ExPASy Swiss-Prot
Match: CHS2_IPOBA (Chalcone synthase LF2 OS=Ipomoea batatas GN=CHS-LF2 PE=2 SV=1)

HSP 1 Score: 113.235 bits (282), Expect = 4.104e-25
Identity = 56/69 (81.16%), Postives = 60/69 (86.96%), Query Frame = 2
Query:    2 PRLGKEAATEAIKEWGQPKSKITHLVFCTTSGVDMPGADYRLTKLLGLRPSVKRLMMY-----AGNTVI 193
            P+LGKEAA  AIKEWGQPKSKITH+VFCTTSGVDMPGADY+LTKLLGL PSVKRLMMY     AG TV+
Sbjct:  103 PKLGKEAAQSAIKEWGQPKSKITHVVFCTTSGVDMPGADYQLTKLLGLSPSVKRLMMYQQGCFAGGTVL 171          
BLAST of EG358240 vs. ExPASy Swiss-Prot
Match: CHS1_GERHY (Chalcone synthase 1 OS=Gerbera hybrida GN=CHS1 PE=2 SV=1)

HSP 1 Score: 113.235 bits (282), Expect = 4.104e-25
Identity = 55/69 (79.71%), Postives = 60/69 (86.96%), Query Frame = 2
Query:    2 PRLGKEAATEAIKEWGQPKSKITHLVFCTTSGVDMPGADYRLTKLLGLRPSVKRLMMY-----AGNTVI 193
            P+LGKEAA +AIKEWG PKSKITHL+FCTTSGVDMPGADY+LTKLLGLRPSVKR MMY     AG TV+
Sbjct:  106 PKLGKEAAMKAIKEWGHPKSKITHLIFCTTSGVDMPGADYQLTKLLGLRPSVKRFMMYQQGCFAGGTVL 174          
BLAST of EG358240 vs. ExPASy Swiss-Prot
Match: CHSY_PHAVU (Chalcone synthase 17 OS=Phaseolus vulgaris GN=CHS17 PE=2 SV=1)

HSP 1 Score: 112.849 bits (281), Expect = 5.360e-25
Identity = 55/69 (79.71%), Postives = 60/69 (86.96%), Query Frame = 2
Query:    2 PRLGKEAATEAIKEWGQPKSKITHLVFCTTSGVDMPGADYRLTKLLGLRPSVKRLMMY-----AGNTVI 193
            P+LGKEAA +AIKEWGQPKSKITHL+FCTTSGVDMPGADY+LTKLLGLRP VKR MMY     AG TV+
Sbjct:  103 PKLGKEAAVKAIKEWGQPKSKITHLIFCTTSGVDMPGADYQLTKLLGLRPYVKRYMMYQQGCFAGGTVL 171          
BLAST of EG358240 vs. ExPASy Swiss-Prot
Match: CHSY_CHRAE (Chalcone synthase OS=Chrysosplenium americanum GN=CHS PE=2 SV=1)

HSP 1 Score: 112.849 bits (281), Expect = 5.360e-25
Identity = 53/57 (92.98%), Postives = 56/57 (98.25%), Query Frame = 2
Query:    5 RLGKEAATEAIKEWGQPKSKITHLVFCTTSGVDMPGADYRLTKLLGLRPSVKRLMMY 175
            +LGKEAA +AIKEWGQPKSKITHLVFCTTSGVDMPGADY+LTKLLGLRPSVKRLMMY
Sbjct:  107 KLGKEAAVKAIKEWGQPKSKITHLVFCTTSGVDMPGADYQLTKLLGLRPSVKRLMMY 163          
BLAST of EG358240 vs. ExPASy Swiss-Prot
Match: CHS3_IPOBA (Chalcone synthase LF3 OS=Ipomoea batatas GN=CHS-LF3 PE=2 SV=1)

HSP 1 Score: 112.849 bits (281), Expect = 5.360e-25
Identity = 56/69 (81.16%), Postives = 60/69 (86.96%), Query Frame = 2
Query:    2 PRLGKEAATEAIKEWGQPKSKITHLVFCTTSGVDMPGADYRLTKLLGLRPSVKRLMMY-----AGNTVI 193
            P+LGKEAA  AIK WGQPKSKITH+VFCTTSGVDMPGADY+LTKLLGLRPSVKRLMMY     AG TV+
Sbjct:  103 PKLGKEAAQSAIKGWGQPKSKITHVVFCTTSGVDMPGADYQLTKLLGLRPSVKRLMMYQQGCFAGGTVL 171          
BLAST of EG358240 vs. ExPASy Swiss-Prot
Match: CHS2_SECCE (Chalcone synthase 2 OS=Secale cereale GN=CHS2 PE=2 SV=1)

HSP 1 Score: 112.849 bits (281), Expect = 5.360e-25
Identity = 55/69 (79.71%), Postives = 61/69 (88.41%), Query Frame = 2
Query:    2 PRLGKEAATEAIKEWGQPKSKITHLVFCTTSGVDMPGADYRLTKLLGLRPSVKRLMMY-----AGNTVI 193
            P+LGK AA +AIKEWGQP+SKITHLVFCTTSGVDMPGADY+LTK+LGLRPSVKRLMMY     AG TV+
Sbjct:  106 PKLGKAAAQKAIKEWGQPRSKITHLVFCTTSGVDMPGADYQLTKMLGLRPSVKRLMMYQQGCFAGGTVL 174          
BLAST of EG358240 vs. ExPASy Swiss-Prot
Match: CHS1_SECCE (Chalcone synthase 1 OS=Secale cereale GN=CHS1 PE=3 SV=1)

HSP 1 Score: 112.849 bits (281), Expect = 5.360e-25
Identity = 55/69 (79.71%), Postives = 61/69 (88.41%), Query Frame = 2
Query:    2 PRLGKEAATEAIKEWGQPKSKITHLVFCTTSGVDMPGADYRLTKLLGLRPSVKRLMMY-----AGNTVI 193
            P+LGK AA +AIKEWGQP+SKITHLVFCTTSGVDMPGADY+LTK+LGLRPSVKRLMMY     AG TV+
Sbjct:  106 PKLGKAAAQKAIKEWGQPRSKITHLVFCTTSGVDMPGADYQLTKMLGLRPSVKRLMMYQQGCFAGGTVL 174          
BLAST of EG358240 vs. ExPASy Swiss-Prot
Match: CHS1_HORVU (Chalcone synthase 1 OS=Hordeum vulgare GN=CHS1 PE=3 SV=1)

HSP 1 Score: 112.849 bits (281), Expect = 5.360e-25
Identity = 55/69 (79.71%), Postives = 61/69 (88.41%), Query Frame = 2
Query:    2 PRLGKEAATEAIKEWGQPKSKITHLVFCTTSGVDMPGADYRLTKLLGLRPSVKRLMMY-----AGNTVI 193
            P+LGK AA +AIKEWGQP+SKITHLVFCTTSGVDMPGADY+LTK+LGLRPSVKRLMMY     AG TV+
Sbjct:  106 PKLGKAAAQKAIKEWGQPRSKITHLVFCTTSGVDMPGADYQLTKMLGLRPSVKRLMMYQQGCFAGGTVL 174          
BLAST of EG358240 vs. ExPASy Swiss-Prot
Match: CHSY_PUELO (Chalcone synthase OS=Pueraria lobata GN=CHS PE=2 SV=1)

HSP 1 Score: 112.464 bits (280), Expect = 7.000e-25
Identity = 55/69 (79.71%), Postives = 60/69 (86.96%), Query Frame = 2
Query:    2 PRLGKEAATEAIKEWGQPKSKITHLVFCTTSGVDMPGADYRLTKLLGLRPSVKRLMMY-----AGNTVI 193
            P+LGKEAAT+AIKEWGQPKSKITHL+FCTTSGVDMPGADY+LTK LGLRP VKR MMY     AG TV+
Sbjct:  103 PKLGKEAATKAIKEWGQPKSKITHLIFCTTSGVDMPGADYQLTKQLGLRPYVKRYMMYQQGCFAGGTVL 171          
BLAST of EG358240 vs. ExPASy Swiss-Prot
Match: CHSA_SOLTU (Chalcone synthase 1A OS=Solanum tuberosum GN=CHS1A PE=2 SV=1)

HSP 1 Score: 112.079 bits (279), Expect = 9.142e-25
Identity = 55/69 (79.71%), Postives = 59/69 (85.51%), Query Frame = 2
Query:    2 PRLGKEAATEAIKEWGQPKSKITHLVFCTTSGVDMPGADYRLTKLLGLRPSVKRLMMY-----AGNTVI 193
            P+LGKEAA +AIKEWGQPKSKITHLVFCTTSGVDMPG DY+L KLLGLRPSVKRLMMY      G TV+
Sbjct:  103 PKLGKEAAQKAIKEWGQPKSKITHLVFCTTSGVDMPGCDYQLAKLLGLRPSVKRLMMYQQGCFVGGTVL 171          
The following BLAST results are available for this feature:
BLAST of EG358240 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 142
Match NameE-valueIdentityDescription
CHS2_IPOBA4.104e-2581.16Chalcone synthase LF2 OS=Ipomoea batatas GN=CHS-LF... [more]
CHS1_GERHY4.104e-2579.71Chalcone synthase 1 OS=Gerbera hybrida GN=CHS1 PE=... [more]
CHSY_PHAVU5.360e-2579.71Chalcone synthase 17 OS=Phaseolus vulgaris GN=CHS1... [more]
CHSY_CHRAE5.360e-2592.98Chalcone synthase OS=Chrysosplenium americanum GN=... [more]
CHS3_IPOBA5.360e-2581.16Chalcone synthase LF3 OS=Ipomoea batatas GN=CHS-LF... [more]
CHS2_SECCE5.360e-2579.71Chalcone synthase 2 OS=Secale cereale GN=CHS2 PE=2... [more]
CHS1_SECCE5.360e-2579.71Chalcone synthase 1 OS=Secale cereale GN=CHS1 PE=3... [more]
CHS1_HORVU5.360e-2579.71Chalcone synthase 1 OS=Hordeum vulgare GN=CHS1 PE=... [more]
CHSY_PUELO7.000e-2579.71Chalcone synthase OS=Pueraria lobata GN=CHS PE=2 S... [more]
CHSA_SOLTU9.142e-2579.71Chalcone synthase 1A OS=Solanum tuberosum GN=CHS1A... [more]

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Properties
Property NameValue
Genbank description12h4 Citrus sinensis flesh suppression subtractive hybridization (SSH) cDNA library Moro nucellare 58-8D-I cultivar Citrus sinensis cDNA clone Cl0012h4, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EG358240 ID=EG358240; Name=EG358240; organism=Citrus sinensis; type=EST; length=331bp
ACCGAGGCTCGGCAAAGAAGCGGCCACCGAGGCCATTAAAGAATGGGGCC
AGCCCAAGTCCAAAATCACCCACTTGGTCTTTTGCACCACTAGTGGAGTT
GACATGCCCGGGGCCGATTACCGGCTCACAAAACTATTGGGCCTTCGCCC
ATCCGTCAAACGTCTCATGATGTACGCGGGGAACACAGTCATTCCGTCTT
TCTATATCTTCTAGAAAATCCCGATGGCTTCTCGTTACGAAGTGGAAGTG
ACGATCACCTCCGCCAAGGACCTCAAGAACGTCAACTGGCGCCACGGCCC
CAACAGGCCGTACCTCGGCCGCGACCACGCT
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