EG358240

Overview
NameEG358240
Unique NameEG358240
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length331
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of EG358240 vs. ExPASy Swiss-Prot
Match: CHS7_SORBI (Chalcone synthase 7 OS=Sorghum bicolor GN=CHS7 PE=3 SV=1)

HSP 1 Score: 112.079 bits (279), Expect = 9.142e-25
Identity = 55/69 (79.71%), Postives = 60/69 (86.96%), Query Frame = 2 
Query:    2 PRLGKEAATEAIKEWGQPKSKITHLVFCTTSGVDMPGADYRLTKLLGLRPSVKRLMMY-----AGNTVI 193
            P+LGK AA +AIKEWGQPKSKITHLVFCTTSGVDMPGADY+LTK+LGLRPSV RLMMY     AG TV+
Sbjct:  107 PKLGKAAAQKAIKEWGQPKSKITHLVFCTTSGVDMPGADYQLTKMLGLRPSVNRLMMYQQGCFAGGTVL 175
[Close]
BLAST of EG358240 vs. ExPASy Swiss-Prot
Match: CHS6_SORBI (Chalcone synthase 6 OS=Sorghum bicolor GN=CHS6 PE=3 SV=1)

HSP 1 Score: 112.079 bits (279), Expect = 9.142e-25
Identity = 55/69 (79.71%), Postives = 60/69 (86.96%), Query Frame = 2 
Query:    2 PRLGKEAATEAIKEWGQPKSKITHLVFCTTSGVDMPGADYRLTKLLGLRPSVKRLMMY-----AGNTVI 193
            P+LGK AA +AIKEWGQPKSKITHLVFCTTSGVDMPGADY+LTK+LGLRPSV RLMMY     AG TV+
Sbjct:  107 PKLGKAAAQKAIKEWGQPKSKITHLVFCTTSGVDMPGADYQLTKMLGLRPSVNRLMMYQQGCFAGGTVL 175
[Close]
BLAST of EG358240 vs. ExPASy Swiss-Prot
Match: CHS3_SORBI (Chalcone synthase 3 OS=Sorghum bicolor GN=CHS3 PE=3 SV=1)

HSP 1 Score: 112.079 bits (279), Expect = 9.142e-25
Identity = 55/69 (79.71%), Postives = 60/69 (86.96%), Query Frame = 2 
Query:    2 PRLGKEAATEAIKEWGQPKSKITHLVFCTTSGVDMPGADYRLTKLLGLRPSVKRLMMY-----AGNTVI 193
            P+LGK AA +AIKEWGQPKSKITHLVFCTTSGVDMPGADY+LTK+LGLRPSV RLMMY     AG TV+
Sbjct:  107 PKLGKAAAQKAIKEWGQPKSKITHLVFCTTSGVDMPGADYQLTKMLGLRPSVNRLMMYQQGCFAGGTVL 175
[Close]
BLAST of EG358240 vs. ExPASy Swiss-Prot
Match: CHS2_SORBI (Chalcone synthase 2 OS=Sorghum bicolor GN=CHS2 PE=3 SV=1)

HSP 1 Score: 112.079 bits (279), Expect = 9.142e-25
Identity = 55/69 (79.71%), Postives = 60/69 (86.96%), Query Frame = 2 
Query:    2 PRLGKEAATEAIKEWGQPKSKITHLVFCTTSGVDMPGADYRLTKLLGLRPSVKRLMMY-----AGNTVI 193
            P+LGK AA +AIKEWGQPKSKITHLVFCTTSGVDMPGADY+LTK+LGLRPSV RLMMY     AG TV+
Sbjct:  107 PKLGKAAAQKAIKEWGQPKSKITHLVFCTTSGVDMPGADYQLTKMLGLRPSVNRLMMYQQGCFAGGTVL 175
[Close]
BLAST of EG358240 vs. ExPASy Swiss-Prot
Match: CHS1_SORBI (Chalcone synthase 1 OS=Sorghum bicolor GN=CHS1 PE=3 SV=1)

HSP 1 Score: 112.079 bits (279), Expect = 9.142e-25
Identity = 55/69 (79.71%), Postives = 60/69 (86.96%), Query Frame = 2 
Query:    2 PRLGKEAATEAIKEWGQPKSKITHLVFCTTSGVDMPGADYRLTKLLGLRPSVKRLMMY-----AGNTVI 193
            P+LGK AA +AIKEWGQPKSKITHLVFCTTSGVDMPGADY+LTK+LGLRPSV RLMMY     AG TV+
Sbjct:  107 PKLGKAAAQKAIKEWGQPKSKITHLVFCTTSGVDMPGADYQLTKMLGLRPSVNRLMMYQQGCFAGGTVL 175
[Close]
BLAST of EG358240 vs. ExPASy Swiss-Prot
Match: CHSY_ONOVI (Chalcone synthase OS=Onobrychis viciifolia GN=CHS PE=2 SV=1)

HSP 1 Score: 111.694 bits (278), Expect = 1.194e-24
Identity = 55/69 (79.71%), Postives = 59/69 (85.51%), Query Frame = 2 
Query:    2 PRLGKEAATEAIKEWGQPKSKITHLVFCTTSGVDMPGADYRLTKLLGLRPSVKRLMMY-----AGNTVI 193
            PRLGKEAA +AIKEWGQPKSKITHL+ CTTSGVDMPGADY+LTKLLGLRP VKR MMY     AG TV+
Sbjct:  103 PRLGKEAAVKAIKEWGQPKSKITHLIVCTTSGVDMPGADYQLTKLLGLRPHVKRYMMYQQGCFAGGTVL 171
[Close]
BLAST of EG358240 vs. ExPASy Swiss-Prot
Match: CHS5_SORBI (Chalcone synthase 5 OS=Sorghum bicolor GN=CHS5 PE=3 SV=1)

HSP 1 Score: 111.694 bits (278), Expect = 1.194e-24
Identity = 55/69 (79.71%), Postives = 60/69 (86.96%), Query Frame = 2 
Query:    2 PRLGKEAATEAIKEWGQPKSKITHLVFCTTSGVDMPGADYRLTKLLGLRPSVKRLMMY-----AGNTVI 193
            P+LGK AA +AIKEWGQPKSKITHLVFCTTSGVDMPGADY+LTK+LGLRPSV RLMMY     AG TV+
Sbjct:  107 PKLGKAAAHKAIKEWGQPKSKITHLVFCTTSGVDMPGADYQLTKMLGLRPSVNRLMMYQQGCFAGGTVL 175
[Close]
BLAST of EG358240 vs. ExPASy Swiss-Prot
Match: CHS8_MEDSA (Chalcone synthase 8 OS=Medicago sativa GN=CHS8 PE=2 SV=1)

HSP 1 Score: 111.309 bits (277), Expect = 1.559e-24
Identity = 55/69 (79.71%), Postives = 59/69 (85.51%), Query Frame = 2 
Query:    2 PRLGKEAATEAIKEWGQPKSKITHLVFCTTSGVDMPGADYRLTKLLGLRPSVKRLMMY-----AGNTVI 193
            PRLGKEAA +AIKEWGQPKSKITHL+ CTTSGVDMPGADY+LTKLLGLRP VKR MMY     AG TV+
Sbjct:  103 PRLGKEAAVKAIKEWGQPKSKITHLIVCTTSGVDMPGADYQLTKLLGLRPYVKRYMMYQQGCFAGGTVL 171
[Close]
BLAST of EG358240 vs. ExPASy Swiss-Prot
Match: CHS5_MEDSA (Chalcone synthase 4-2 OS=Medicago sativa GN=CHS4-2 PE=2 SV=1)

HSP 1 Score: 111.309 bits (277), Expect = 1.559e-24
Identity = 55/69 (79.71%), Postives = 59/69 (85.51%), Query Frame = 2 
Query:    2 PRLGKEAATEAIKEWGQPKSKITHLVFCTTSGVDMPGADYRLTKLLGLRPSVKRLMMY-----AGNTVI 193
            PRLGKEAA +AIKEWGQPKSKITHL+ CTTSGVDMPGADY+LTKLLGLRP VKR MMY     AG TV+
Sbjct:  103 PRLGKEAAVKAIKEWGQPKSKITHLIVCTTSGVDMPGADYQLTKLLGLRPYVKRYMMYQQGCFAGGTVL 171
[Close]
BLAST of EG358240 vs. ExPASy Swiss-Prot
Match: CHS4_MEDSA (Chalcone synthase 4 OS=Medicago sativa GN=CHS4 PE=2 SV=2)

HSP 1 Score: 111.309 bits (277), Expect = 1.559e-24
Identity = 55/69 (79.71%), Postives = 59/69 (85.51%), Query Frame = 2 
Query:    2 PRLGKEAATEAIKEWGQPKSKITHLVFCTTSGVDMPGADYRLTKLLGLRPSVKRLMMY-----AGNTVI 193
            PRLGKEAA +AIKEWGQPKSKITHL+ CTTSGVDMPGADY+LTKLLGLRP VKR MMY     AG TV+
Sbjct:  103 PRLGKEAAVKAIKEWGQPKSKITHLIVCTTSGVDMPGADYQLTKLLGLRPYVKRYMMYQQGCFAGGTVL 171
The following BLAST results are available for this feature:
BLAST of EG358240 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 142
Match NameE-valueIdentityDescription
CHS7_SORBI9.142e-2579.71Chalcone synthase 7 OS=Sorghum bicolor GN=CHS7 PE=... [more]
CHS6_SORBI9.142e-2579.71Chalcone synthase 6 OS=Sorghum bicolor GN=CHS6 PE=... [more]
CHS3_SORBI9.142e-2579.71Chalcone synthase 3 OS=Sorghum bicolor GN=CHS3 PE=... [more]
CHS2_SORBI9.142e-2579.71Chalcone synthase 2 OS=Sorghum bicolor GN=CHS2 PE=... [more]
CHS1_SORBI9.142e-2579.71Chalcone synthase 1 OS=Sorghum bicolor GN=CHS1 PE=... [more]
CHSY_ONOVI1.194e-2479.71Chalcone synthase OS=Onobrychis viciifolia GN=CHS ... [more]
CHS5_SORBI1.194e-2479.71Chalcone synthase 5 OS=Sorghum bicolor GN=CHS5 PE=... [more]
CHS8_MEDSA1.559e-2479.71Chalcone synthase 8 OS=Medicago sativa GN=CHS8 PE=... [more]
CHS5_MEDSA1.559e-2479.71Chalcone synthase 4-2 OS=Medicago sativa GN=CHS4-2... [more]
CHS4_MEDSA1.559e-2479.71Chalcone synthase 4 OS=Medicago sativa GN=CHS4 PE=... [more]

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Properties
Property NameValue
Genbank description12h4 Citrus sinensis flesh suppression subtractive hybridization (SSH) cDNA library Moro nucellare 58-8D-I cultivar Citrus sinensis cDNA clone Cl0012h4, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EG358240 ID=EG358240; Name=EG358240; organism=Citrus sinensis; type=EST; length=331bp
ACCGAGGCTCGGCAAAGAAGCGGCCACCGAGGCCATTAAAGAATGGGGCC
AGCCCAAGTCCAAAATCACCCACTTGGTCTTTTGCACCACTAGTGGAGTT
GACATGCCCGGGGCCGATTACCGGCTCACAAAACTATTGGGCCTTCGCCC
ATCCGTCAAACGTCTCATGATGTACGCGGGGAACACAGTCATTCCGTCTT
TCTATATCTTCTAGAAAATCCCGATGGCTTCTCGTTACGAAGTGGAAGTG
ACGATCACCTCCGCCAAGGACCTCAAGAACGTCAACTGGCGCCACGGCCC
CAACAGGCCGTACCTCGGCCGCGACCACGCT
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