EG358240

Overview
NameEG358240
Unique NameEG358240
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length331
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EG358240 vs. ExPASy Swiss-Prot
Match: CHS2_MEDSA (Chalcone synthase 2 OS=Medicago sativa GN=CHS2 PE=1 SV=1)

HSP 1 Score: 111.309 bits (277), Expect = 1.559e-24
Identity = 55/69 (79.71%), Postives = 59/69 (85.51%), Query Frame = 2
Query:    2 PRLGKEAATEAIKEWGQPKSKITHLVFCTTSGVDMPGADYRLTKLLGLRPSVKRLMMY-----AGNTVI 193
            PRLGKEAA +AIKEWGQPKSKITHL+ CTTSGVDMPGADY+LTKLLGLRP VKR MMY     AG TV+
Sbjct:  103 PRLGKEAAVKAIKEWGQPKSKITHLIVCTTSGVDMPGADYQLTKLLGLRPYVKRYMMYQQGCFAGGTVL 171          
BLAST of EG358240 vs. ExPASy Swiss-Prot
Match: CHSY_DIAMO (Chalcone synthase OS=Dianthus monspessulanus GN=CHS PE=2 SV=1)

HSP 1 Score: 110.923 bits (276), Expect = 2.037e-24
Identity = 53/69 (76.81%), Postives = 60/69 (86.96%), Query Frame = 2
Query:    2 PRLGKEAATEAIKEWGQPKSKITHLVFCTTSGVDMPGADYRLTKLLGLRPSVKRLMMY-----AGNTVI 193
            PRLGKEAA +AIKEWGQPKSKITH++ CTTSGVDMPGADY+LTKLLGLRPSV+R M+Y     AG TV+
Sbjct:  103 PRLGKEAAVKAIKEWGQPKSKITHVIMCTTSGVDMPGADYQLTKLLGLRPSVRRFMLYQQGCFAGGTVL 171          
BLAST of EG358240 vs. ExPASy Swiss-Prot
Match: CHSY_DIACA (Chalcone synthase OS=Dianthus caryophyllus GN=CHS PE=2 SV=1)

HSP 1 Score: 110.923 bits (276), Expect = 2.037e-24
Identity = 53/69 (76.81%), Postives = 60/69 (86.96%), Query Frame = 2
Query:    2 PRLGKEAATEAIKEWGQPKSKITHLVFCTTSGVDMPGADYRLTKLLGLRPSVKRLMMY-----AGNTVI 193
            PRLGKEAA +AIKEWGQPKSKITH++ CTTSGVDMPGADY+LTKLLGLRPSV+R M+Y     AG TV+
Sbjct:  103 PRLGKEAAVKAIKEWGQPKSKITHVIMCTTSGVDMPGADYQLTKLLGLRPSVRRFMLYQQGCFAGGTVL 171          
BLAST of EG358240 vs. ExPASy Swiss-Prot
Match: CHSY_CATRO (Chalcone synthase OS=Catharanthus roseus GN=CHS PE=2 SV=1)

HSP 1 Score: 110.923 bits (276), Expect = 2.037e-24
Identity = 56/69 (81.16%), Postives = 60/69 (86.96%), Query Frame = 2
Query:    2 PRLGKEAATEAIKEWGQPKSKITHLVFCTTSGVDMPGADYRLTKLLGLRPSVKRLMMY-----AGNTVI 193
            P+LGKEAA +AIKEWGQ KSKITHLVFCTTSGVDMPGADY+LTKLLGLR SVKRLMMY     AG TV+
Sbjct:  103 PKLGKEAAQKAIKEWGQSKSKITHLVFCTTSGVDMPGADYQLTKLLGLRSSVKRLMMYQQGCFAGGTVL 171          
BLAST of EG358240 vs. ExPASy Swiss-Prot
Match: CHS7_SOYBN (Chalcone synthase 7 OS=Glycine max GN=CHS7 PE=3 SV=1)

HSP 1 Score: 110.538 bits (275), Expect = 2.660e-24
Identity = 54/69 (78.26%), Postives = 59/69 (85.51%), Query Frame = 2
Query:    2 PRLGKEAATEAIKEWGQPKSKITHLVFCTTSGVDMPGADYRLTKLLGLRPSVKRLMMY-----AGNTVI 193
            P+LGKEAA +AIKEWGQPKSKITHL+FCTTSGVDMPGADY+LTK LGLRP VKR MMY     AG TV+
Sbjct:  103 PKLGKEAAVKAIKEWGQPKSKITHLIFCTTSGVDMPGADYQLTKQLGLRPYVKRYMMYQQGCFAGGTVL 171          
BLAST of EG358240 vs. ExPASy Swiss-Prot
Match: CHS2_MAIZE (Chalcone synthase C2 OS=Zea mays GN=C2 PE=3 SV=1)

HSP 1 Score: 109.768 bits (273), Expect = 4.537e-24
Identity = 54/69 (78.26%), Postives = 59/69 (85.51%), Query Frame = 2
Query:    2 PRLGKEAATEAIKEWGQPKSKITHLVFCTTSGVDMPGADYRLTKLLGLRPSVKRLMMY-----AGNTVI 193
            P+LGK AA +AIKEWGQPKS+ITHLVFCTTSGVDMPGADY+LTK LGLRPSV RLMMY     AG TV+
Sbjct:  107 PKLGKAAAQKAIKEWGQPKSRITHLVFCTTSGVDMPGADYQLTKALGLRPSVNRLMMYQQGCFAGGTVL 175          
BLAST of EG358240 vs. ExPASy Swiss-Prot
Match: CHS6_MEDSA (Chalcone synthase 6-4 (Fragment) OS=Medicago sativa GN=CHS6-4 PE=2 SV=1)

HSP 1 Score: 109.383 bits (272), Expect = 5.926e-24
Identity = 54/67 (80.60%), Postives = 58/67 (86.57%), Query Frame = 2
Query:    8 LGKEAATEAIKEWGQPKSKITHLVFCTTSGVDMPGADYRLTKLLGLRPSVKRLMMY-----AGNTVI 193
            LGKEAA +AIKEWGQPKSKITHL+FCTTSGVDMPGADY+LTKLLGLRP VKR MMY     AG TV+
Sbjct:    1 LGKEAAVKAIKEWGQPKSKITHLIFCTTSGVDMPGADYQLTKLLGLRPYVKRYMMYQQGCFAGGTVL 67          
BLAST of EG358240 vs. ExPASy Swiss-Prot
Match: CHSF_PETHY (Chalcone synthase F OS=Petunia hybrida GN=CHSF PE=2 SV=2)

HSP 1 Score: 108.227 bits (269), Expect = 1.320e-23
Identity = 54/69 (78.26%), Postives = 58/69 (84.06%), Query Frame = 2
Query:    2 PRLGKEAATEAIKEWGQPKSKITHLVFCTTSGVDMPGADYRLTKLLGLRPSVKRLMM-----YAGNTVI 193
            P+LGKEAA  AIKEWGQPKSKITHLVFCTT+GVDM GADY+LTKLLGL PSVKRLMM     Y G TV+
Sbjct:  103 PKLGKEAAQNAIKEWGQPKSKITHLVFCTTTGVDMHGADYQLTKLLGLSPSVKRLMMYQLGCYGGGTVL 171          
BLAST of EG358240 vs. ExPASy Swiss-Prot
Match: CHSY_ORYSJ (Chalcone synthase OS=Oryza sativa subsp. japonica GN=CHS PE=2 SV=1)

HSP 1 Score: 106.686 bits (265), Expect = 3.841e-23
Identity = 51/69 (73.91%), Postives = 59/69 (85.51%), Query Frame = 2
Query:    2 PRLGKEAATEAIKEWGQPKSKITHLVFCTTSGVDMPGADYRLTKLLGLRPSVKRLMMY-----AGNTVI 193
            P+LGK AA +AIKEWGQP+S+ITHLVFCTTSGVDMPGADY+L K+LGLRP+V RLMMY     AG TV+
Sbjct:  106 PKLGKAAAQKAIKEWGQPRSRITHLVFCTTSGVDMPGADYQLAKMLGLRPNVNRLMMYQQGCFAGGTVL 174          
BLAST of EG358240 vs. ExPASy Swiss-Prot
Match: CHSY_ORYSI (Chalcone synthase OS=Oryza sativa subsp. indica GN=CHS PE=2 SV=1)

HSP 1 Score: 106.686 bits (265), Expect = 3.841e-23
Identity = 51/69 (73.91%), Postives = 59/69 (85.51%), Query Frame = 2
Query:    2 PRLGKEAATEAIKEWGQPKSKITHLVFCTTSGVDMPGADYRLTKLLGLRPSVKRLMMY-----AGNTVI 193
            P+LGK AA +AIKEWGQP+S+ITHLVFCTTSGVDMPGADY+L K+LGLRP+V RLMMY     AG TV+
Sbjct:  106 PKLGKAAAQKAIKEWGQPRSRITHLVFCTTSGVDMPGADYQLAKMLGLRPNVSRLMMYQQGCFAGGTVL 174          
The following BLAST results are available for this feature:
BLAST of EG358240 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 142
Match NameE-valueIdentityDescription
CHS2_MEDSA1.559e-2479.71Chalcone synthase 2 OS=Medicago sativa GN=CHS2 PE=... [more]
CHSY_DIAMO2.037e-2476.81Chalcone synthase OS=Dianthus monspessulanus GN=CH... [more]
CHSY_DIACA2.037e-2476.81Chalcone synthase OS=Dianthus caryophyllus GN=CHS ... [more]
CHSY_CATRO2.037e-2481.16Chalcone synthase OS=Catharanthus roseus GN=CHS PE... [more]
CHS7_SOYBN2.660e-2478.26Chalcone synthase 7 OS=Glycine max GN=CHS7 PE=3 SV... [more]
CHS2_MAIZE4.537e-2478.26Chalcone synthase C2 OS=Zea mays GN=C2 PE=3 SV=1[more]
CHS6_MEDSA5.926e-2480.60Chalcone synthase 6-4 (Fragment) OS=Medicago sativ... [more]
CHSF_PETHY1.320e-2378.26Chalcone synthase F OS=Petunia hybrida GN=CHSF PE=... [more]
CHSY_ORYSJ3.841e-2373.91Chalcone synthase OS=Oryza sativa subsp. japonica ... [more]
CHSY_ORYSI3.841e-2373.91Chalcone synthase OS=Oryza sativa subsp. indica GN... [more]

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Properties
Property NameValue
Genbank description12h4 Citrus sinensis flesh suppression subtractive hybridization (SSH) cDNA library Moro nucellare 58-8D-I cultivar Citrus sinensis cDNA clone Cl0012h4, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EG358240 ID=EG358240; Name=EG358240; organism=Citrus sinensis; type=EST; length=331bp
ACCGAGGCTCGGCAAAGAAGCGGCCACCGAGGCCATTAAAGAATGGGGCC
AGCCCAAGTCCAAAATCACCCACTTGGTCTTTTGCACCACTAGTGGAGTT
GACATGCCCGGGGCCGATTACCGGCTCACAAAACTATTGGGCCTTCGCCC
ATCCGTCAAACGTCTCATGATGTACGCGGGGAACACAGTCATTCCGTCTT
TCTATATCTTCTAGAAAATCCCGATGGCTTCTCGTTACGAAGTGGAAGTG
ACGATCACCTCCGCCAAGGACCTCAAGAACGTCAACTGGCGCCACGGCCC
CAACAGGCCGTACCTCGGCCGCGACCACGCT
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