EG358238

Overview
NameEG358238
Unique NameEG358238
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length336
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EG358238 vs. ExPASy Swiss-Prot
Match: GSTF1_ORYSJ (Probable glutathione S-transferase GSTF1 OS=Oryza sativa subsp. japonica GN=GSTF1 PE=1 SV=2)

HSP 1 Score: 73.1738 bits (178), Expect = 4.689e-13
Identity = 35/65 (53.85%), Postives = 42/65 (64.62%), Query Frame = -3
Query:    8 YGSVKAACPQRVLACLLEKGVEFEIVQVDLDEGEHKRPEFLLRQPFGQVPVIEDGDFKLFESRAI 202
            +G  ++    RVL CL E G E+E+V VD    EHK PE L R PFGQ+P  +DGD  LFESRAI
Sbjct:    7 FGPAQSTNVARVLLCLEEVGAEYEVVNVDFTVMEHKSPEHLKRNPFGQIPAFQDGDLYLFESRAI 71          
BLAST of EG358238 vs. ExPASy Swiss-Prot
Match: GSTF_HYOMU (Glutathione S-transferase OS=Hyoscyamus muticus PE=1 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 1.045e-12
Identity = 33/65 (50.77%), Postives = 44/65 (67.69%), Query Frame = -3
Query:    8 YGSVKAACPQRVLACLLEKGVEFEIVQVDLDEGEHKRPEFLLRQPFGQVPVIEDGDFKLFESRAI 202
            +G   +    RV+A L EK ++FE+V V++  G+HK+  F+   PFGQVP  EDGD KLFESRAI
Sbjct:    6 HGPAMSPAVMRVIATLKEKDLDFELVPVNMQAGDHKKEPFITLNPFGQVPAFEDGDLKLFESRAI 70          
BLAST of EG358238 vs. ExPASy Swiss-Prot
Match: GSTF2_ORYSJ (Probable glutathione S-transferase GSTF2 OS=Oryza sativa subsp. japonica GN=GSTF2 PE=1 SV=3)

HSP 1 Score: 72.0182 bits (175), Expect = 1.045e-12
Identity = 35/67 (52.24%), Postives = 45/67 (67.16%), Query Frame = -3
Query:    2 YGSVKAACPQRVLACLLEKGVEFEIVQVDLDEGEHKRPEFLLRQPFGQVPVIEDGDFKLFESRAIIR 202
            YGS  +    R +A L E G E+EIV +D  +GEHK P+ L R PFGQVP ++DGD  L+ESRAI +
Sbjct:    7 YGSTLSWNVTRCVAVLEEAGAEYEIVPLDFSKGEHKAPDHLARNPFGQVPALQDGDLFLWESRAICK 73          
BLAST of EG358238 vs. ExPASy Swiss-Prot
Match: GSTF3_MAIZE (Glutathione S-transferase 3 OS=Zea mays GN=GST3 PE=1 SV=4)

HSP 1 Score: 71.633 bits (174), Expect = 1.364e-12
Identity = 37/67 (55.22%), Postives = 44/67 (65.67%), Query Frame = -3
Query:    2 YGSVKAACPQRVLACLLEKGVEFEIVQVDLDEGEHKRPEFLLRQPFGQVPVIEDGDFKLFESRAIIR 202
            YG   +    RV   L EKG++FEIV VDL  G HK+P+FL   PFGQ+P + DGD  LFESRAI R
Sbjct:    7 YGMPLSPNVVRVATVLNEKGLDFEIVPVDLTTGAHKQPDFLALNPFGQIPALVDGDEVLFESRAINR 73          
BLAST of EG358238 vs. ExPASy Swiss-Prot
Match: GSTF6_ARATH (Glutathione S-transferase 6, chloroplastic OS=Arabidopsis thaliana GN=GST6 PE=1 SV=3)

HSP 1 Score: 68.1662 bits (165), Expect = 1.508e-11
Identity = 32/65 (49.23%), Postives = 42/65 (64.62%), Query Frame = -3
Query:    8 YGSVKAACPQRVLACLLEKGVEFEIVQVDLDEGEHKRPEFLLRQPFGQVPVIEDGDFKLFESRAI 202
            +G   +    RVLA L EK ++FE++ VD+  G HK+   L   PFGQ+P +EDGD  LFESRAI
Sbjct:   55 HGVPMSTATMRVLATLYEKDLQFELIPVDMRAGAHKQEAHLALNPFGQIPALEDGDLTLFESRAI 119          
BLAST of EG358238 vs. ExPASy Swiss-Prot
Match: GSTF1_MAIZE (Glutathione S-transferase 1 OS=Zea mays GN=GST1 PE=1 SV=4)

HSP 1 Score: 67.781 bits (164), Expect = 1.970e-11
Identity = 33/67 (49.25%), Postives = 43/67 (64.18%), Query Frame = -3
Query:    2 YGSVKAACPQRVLACLLEKGVEFEIVQVDLDEGEHKRPEFLLRQPFGQVPVIEDGDFKLFESRAIIR 202
            YG+V +    R    L E G ++EIV ++    EHK PE L+R PFGQVP ++DGD  LFESRAI +
Sbjct:    7 YGAVMSWNLTRCATALEEAGSDYEIVPINFATAEHKSPEHLVRNPFGQVPALQDGDLYLFESRAICK 73          
The following BLAST results are available for this feature:
BLAST of EG358238 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 16
Match NameE-valueIdentityDescription
GSTF1_ORYSJ4.689e-1353.85Probable glutathione S-transferase GSTF1 OS=Oryza ... [more]
GSTF_HYOMU1.045e-1250.77Glutathione S-transferase OS=Hyoscyamus muticus PE... [more]
GSTF2_ORYSJ1.045e-1252.24Probable glutathione S-transferase GSTF2 OS=Oryza ... [more]
GSTF3_MAIZE1.364e-1255.22Glutathione S-transferase 3 OS=Zea mays GN=GST3 PE... [more]
GSTF6_ARATH1.508e-1149.23Glutathione S-transferase 6, chloroplastic OS=Arab... [more]
GSTF1_MAIZE1.970e-1149.25Glutathione S-transferase 1 OS=Zea mays GN=GST1 PE... [more]

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Properties
Property NameValue
Genbank description4c12 Citrus sinensis flesh suppression subtractive hybridization (SSH) cDNA library Moro nucellare 58-8D-I cultivar Citrus sinensis cDNA clone Cl004c12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EG358238 ID=EG358238; Name=EG358238; organism=Citrus sinensis; type=EST; length=336bp
ACCTTATGATTGCCCTCGACTCAAAAAGCTTAAAATCGCCATCCTCTATT
ACTGGAACTTGCCCAAACGGCTGTCGAAGAAGAAACTCAGGCCTCTTATG
CTCGCCTTCGTCGAGATCAACCTGCACAATCTCAAATTCGACACCCTTTT
CAAGAAGGCAAGCCAATACCCTTTGTGGGCAAGCTGCCTTAACTGAACCA
TACACTTTAACAACCATTATCAATTTTTTTTTTTCTTTTTACACTTTTTT
TTCCTAAGATTAACACCCAGGGGCCAGGGCTTTACTTGAATGGAAAATAA
GACATTTCCTTTATGAATTTGTTGCTTTTCCCCGCG
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