EY720866
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY720866 vs. ExPASy Swiss-Prot
Match: RHLB_XANCP (ATP-dependent RNA helicase rhlB OS=Xanthomonas campestris pv. campestris GN=rhlB PE=3 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 1.095e-15 Identity = 53/162 (32.72%), Postives = 82/162 (50.62%), Query Frame = 2 Query: 167 SFDAMGIKDDLLRGIYQYGFEKPSAIQQRAVMPIIKGRDVIAQAQSGTGKTSMIALTVCQTV-------DTSSREVQALILSPTRELATQTEKVILAIGDFINIQAHACVGGKSVGEDIRKLEHGVHVVSGTPGRVCDMIKR-KTLRTRAIKLWVLDESDEM 628 +F + + L+ G+ GF + + IQ + + G DV QAQ+GTGKT + V + D + +ALIL+PTRELA Q K + G + ++ GG + L+ GV V+ TPGR+ D +K+ K + A ++ VLDE+D M Sbjct: 10 TFSSFDLHPALVAGLESAGFTRCTPIQALTLPVALPGGDVAGQAQTGTGKTLAFLVAVMNRLLIRPALADRKPEDPRALILAPTRELAIQIHKDAVKFGADLGLRFALVYGGVDYDKQRELLQQGVDVIIATPGRLIDYVKQHKVVSLHACEICVLDEADRM 171
BLAST of EY720866 vs. ExPASy Swiss-Prot
Match: RHLB_XANCB (ATP-dependent RNA helicase rhlB OS=Xanthomonas campestris pv. campestris (strain B100) GN=rhlB PE=3 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 1.095e-15 Identity = 53/162 (32.72%), Postives = 82/162 (50.62%), Query Frame = 2 Query: 167 SFDAMGIKDDLLRGIYQYGFEKPSAIQQRAVMPIIKGRDVIAQAQSGTGKTSMIALTVCQTV-------DTSSREVQALILSPTRELATQTEKVILAIGDFINIQAHACVGGKSVGEDIRKLEHGVHVVSGTPGRVCDMIKR-KTLRTRAIKLWVLDESDEM 628 +F + + L+ G+ GF + + IQ + + G DV QAQ+GTGKT + V + D + +ALIL+PTRELA Q K + G + ++ GG + L+ GV V+ TPGR+ D +K+ K + A ++ VLDE+D M Sbjct: 10 TFSSFDLHPALVAGLESAGFTRCTPIQALTLPVALPGGDVAGQAQTGTGKTLAFLVAVMNRLLIRPALADRKPEDPRALILAPTRELAIQIHKDAVKFGADLGLRFALVYGGVDYDKQRELLQQGVDVIIATPGRLIDYVKQHKVVSLHACEICVLDEADRM 171
BLAST of EY720866 vs. ExPASy Swiss-Prot
Match: RHLB_XANC8 (ATP-dependent RNA helicase rhlB OS=Xanthomonas campestris pv. campestris (strain 8004) GN=rhlB PE=3 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 1.095e-15 Identity = 53/162 (32.72%), Postives = 82/162 (50.62%), Query Frame = 2 Query: 167 SFDAMGIKDDLLRGIYQYGFEKPSAIQQRAVMPIIKGRDVIAQAQSGTGKTSMIALTVCQTV-------DTSSREVQALILSPTRELATQTEKVILAIGDFINIQAHACVGGKSVGEDIRKLEHGVHVVSGTPGRVCDMIKR-KTLRTRAIKLWVLDESDEM 628 +F + + L+ G+ GF + + IQ + + G DV QAQ+GTGKT + V + D + +ALIL+PTRELA Q K + G + ++ GG + L+ GV V+ TPGR+ D +K+ K + A ++ VLDE+D M Sbjct: 10 TFSSFDLHPALVAGLESAGFTRCTPIQALTLPVALPGGDVAGQAQTGTGKTLAFLVAVMNRLLIRPALADRKPEDPRALILAPTRELAIQIHKDAVKFGADLGLRFALVYGGVDYDKQRELLQQGVDVIIATPGRLIDYVKQHKVVSLHACEICVLDEADRM 171
BLAST of EY720866 vs. ExPASy Swiss-Prot
Match: RHLB_VIBSL (ATP-dependent RNA helicase rhlB OS=Vibrio splendidus (strain LGP32) GN=rhlB PE=3 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 1.095e-15 Identity = 51/160 (31.87%), Postives = 85/160 (53.12%), Query Frame = 2 Query: 170 FDAMGIKDDLLRGIYQYGFEKPSAIQQRAVMPIIKGRDVIAQAQSGTGKT-SMIALTVCQTVDTSSRE------VQALILSPTRELATQTEKVILAIGDFINIQAHACVGGKSVGEDIRKLEHGVHVVSGTPGRVCDMIKRKTLRTRAIKLWVLDESDEM 628 F + + ++ G+ + GF+ + IQ A+ ++ G+D+ QAQ+GTGKT + + T + T E +A+I++PTRELA Q ++ I+A GG+S + + K+E G ++ GT GR+ D K+K I+ VLDE+D M Sbjct: 11 FADLDLLPQVIEGLEKKGFDYCTPIQALALPVLLTGQDIAGQAQTGTGKTLAFLTATFNHLLKTPEHEGRKPNQPRAIIMAPTRELAIQIYNDADSLVASTGIKAALAYGGESYDKQLGKIEEGADILIGTTGRIIDFYKQKVFNLNHIQAVVLDEADRM 170
BLAST of EY720866 vs. ExPASy Swiss-Prot
Match: RHLB_ALISL (ATP-dependent RNA helicase rhlB OS=Aliivibrio salmonicida (strain LFI1238) GN=rhlB PE=3 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 1.095e-15 Identity = 55/164 (33.54%), Postives = 93/164 (56.71%), Query Frame = 2 Query: 170 FDAMGIKDDLLRGIYQYGFEKPSAIQQRAVMPIIKGRDVIAQAQSGTGKT-SMIALTVCQTVDTSSRE------VQALILSPTRELATQ----TEKVILAIGDFINIQAHACVGGKSVGEDIRKLEHGVHVVSGTPGRVCDMIKRKTLRTRAIKLWVLDESDEM 628 F +G++ +L G+ GF + IQ +A+ ++ G+D+ QAQ+GTGKT + +A T + T + E +A+I++PTRELA Q E +I + G ++A GG+ + + +E GV ++ GT GR+ D K+ + +AI++ VLDE+D M Sbjct: 11 FADLGLEPQVLDGLNAKGFINCTPIQAKALPVLLAGQDIAGQAQTGTGKTLAFLAATFNHLLTTPAPEGRKITQPRAIIMAPTRELAIQIYNDAESLIASTG----LKAALAYGGERYEKQQKVIEAGVDILIGTTGRIIDFYKQGQIDFKAIQVVVLDEADRM 170
BLAST of EY720866 vs. ExPASy Swiss-Prot
Match: RH47_ARATH (DEAD-box ATP-dependent RNA helicase 47 OS=Arabidopsis thaliana GN=RH47 PE=2 SV=2) HSP 1 Score: 83.9593 bits (206), Expect = 1.095e-15 Identity = 55/178 (30.90%), Postives = 89/178 (50.00%), Query Frame = 2 Query: 167 SFDAMGIKDDLLRGIYQYGFEKPSAIQQRAVMPIIKGRDVIAQAQSGTGKTSMIALTVCQTV-------------DTSSREVQALILSPTRELATQ-TEKVILAIGDFINIQAHACVGGKS-VGEDIRKLEHGVHVVSGTPGRVCDMIKRKTLRTRAIKLWVLDESDEMRSRRVRDPI 655 SF+ +G+ D LL + + GF P+ +Q AV IIKG D + Q+ +G+GKT L + + + E+QA+I++P+REL Q +V +G VGG + + ++ ++ +V GTPGR+ ++ K L T + VLDE DE+ S R+ I Sbjct: 111 SFEELGLPDSLLDSLEREGFSVPTDVQSAAVPAIIKGHDAVIQSYTGSGKTLAYLLPILSEIGPLAEKSRSSHSENDKRTEIQAMIVAPSRELGMQIVREVEKLLGPVHRRMVQQLVGGANRMRQEEALKKNKPAIVVGTPGRIAEISKGGKLHTHGCRFLVLDEVDELLSFNFREDI 288
BLAST of EY720866 vs. ExPASy Swiss-Prot
Match: MAK5_ASPFU (ATP-dependent RNA helicase mak5 OS=Aspergillus fumigatus GN=mak5 PE=3 SV=2) HSP 1 Score: 83.9593 bits (206), Expect = 1.095e-15 Identity = 59/187 (31.55%), Postives = 102/187 (54.55%), Query Frame = 2 Query: 137 ETTEGVEAITSFDAMGIKDDLLRGIYQYGFEKPSAIQQRAVMPIIKGRDVIAQAQSGTGKTSMIALTVCQTV------DTSSREVQ---------ALILSPTRELATQTEKVI---LAIGDFINIQAHACVGGKSVGEDIRKLEHGVHVVSGTPGRVCDMI---KRKTLRTRAIKLWVLDESDEMRS 634 E +G + ++++D++G+ ++L G+ + F P+++Q+ + I++G DVI +A +G+GKT + + + D S+++ Q ALILSPTRELA Q K I +A +N + GG SV + R L G +V GTPGRV +++ + + + IK V+DE+D + S Sbjct: 193 EEDDGAD-VSAWDSLGLSPEILTGLSKMKFGSPTSVQEACIPQILEGHDVIGKASTGSGKTLAFGIPILEHYLEKKRDDISAQKEQMSEKDSTPIALILSPTRELAHQLSKHIGELIAQAPGVNARIALLTGGLSVQKQQRLLS-GADIVIGTPGRVWEILSTGQGLIRKMQQIKFLVVDEADRLLS 377
BLAST of EY720866 vs. ExPASy Swiss-Prot
Match: DDX49_MOUSE (Probable ATP-dependent RNA helicase DDX49 OS=Mus musculus GN=Ddx49 PE=2 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 1.095e-15 Identity = 47/164 (28.66%), Postives = 84/164 (51.22%), Query Frame = 2 Query: 161 ITSFDAMGIKDDLLRGIYQYGFEKPSAIQQRAVMPIIKGRDVIAQAQSGTGKTSMIALTVCQTVDTSSREVQALILSPTRELATQTEKVILAIGDFINIQAHACVGGKSVGEDIRKLEHGVHVVSGTPGRVCDMIK-RKTLRTRAIKLWVLDESDEMRSRRVRD 649 + F +G+ L+ Q G ++P+ +Q + I++GRD + A++G+GKT+ L + Q + + L+L+PTRELA Q + +G + ++ VGG + +L HVV TPGR+ D ++ T + I+ V+DE+D + + D Sbjct: 1 MAGFAEIGLSSWLVEQCRQLGLKQPTPVQLGCIPAILEGRDCLGCAKTGSGKTAAFVLPILQKLSEDPYGIFCLVLTPTRELAYQIAEQFRVLGKPLGLKDCIIVGGMDMVAQALELSRKPHVVIATPGRLADHLRSSNTFNMKKIQFLVMDEADRLLEQGCTD 164
BLAST of EY720866 vs. ExPASy Swiss-Prot
Match: DDX27_BOVIN (Probable ATP-dependent RNA helicase DDX27 OS=Bos taurus GN=DDX27 PE=2 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 1.095e-15 Identity = 53/169 (31.36%), Postives = 83/169 (49.11%), Query Frame = 2 Query: 134 FETTEGVEAITSFDAMGIKDDLLRGIYQYGFEKPSAIQQRAVMPIIKGRDVIAQAQSGTGKTSMIALTVCQTVDTSSRE---VQALILSPTRELATQTEKVILAIGDFINIQAHACVGGKSVGEDIRKLEHGVHVVSGTPGRVCDMIKR-KTLRTRAIKLWVLDESDEM 628 FE + SF M + LL+ I GF++P+ IQ+ + + G+D+ A A +GTGKT+ AL V + + R+ + L+L PTREL Q V + F +I VGG V L ++ TPGR+ D + + +I++ +LDE+D M Sbjct: 177 FEDASQYDENLSFQDMNLSRPLLKAITAMGFKQPTPIQKACIPVGLLGKDICACAATGTGKTAAFALPVLERLIYKPRQAPVTRVLVLVPTRELGIQVHSVTKQLAQFCSITTCLAVGGLDVKSQEAALRAAPDILIATPGRLIDHLHNCPSFHLSSIEVLILDEADRM 345
BLAST of EY720866 vs. ExPASy Swiss-Prot
Match: DBP4_YEAST (ATP-dependent RNA helicase DBP4 OS=Saccharomyces cerevisiae GN=DBP4 PE=1 SV=2) HSP 1 Score: 83.9593 bits (206), Expect = 1.095e-15 Identity = 54/171 (31.58%), Postives = 95/171 (55.56%), Query Frame = 2 Query: 170 FDAMGIKDDLLRGIYQYGFEKPSAIQQRAVMPIIKGRDVIAQAQSGTGKTSMIALTVCQTVD----TSSREVQALILSPTRELATQTEKVILAIGDFINIQAHACVGGKSVGEDIRKLEHGVHVVSGTPGRVCDMIKRKT-LRTRAIKLWVLDESD---EMRSRRVRDPII 658 F + I D L+G+ + F K + IQ ++ ++G DV+A A++G+GKT + V + + T + ALI+SPTRELA Q +V+ IG + A +GGK V ++ ++ ++++ GTPGR+ + + L T +++ VLDE+D +M ++ D I+ Sbjct: 43 FKDLPISDPTLKGLRESSFIKLTEIQADSIPVSLQGHDVLAAAKTGSGKTLAFLVPVIEKLYREKWTEFDGLGALIISPTRELAMQIYEVLTKIGSHTSFSAGLVIGGKDVKFELERISR-INILIGTPGRILQHLDQAVGLNTSNLQMLVLDEADRCLDMGFKKTLDAIV 212 The following BLAST results are available for this feature:
BLAST of EY720866 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >EY720866 ID=EY720866; Name=EY720866; organism=Citrus sinensis; type=EST; length=802bpback to top |