EY720866

Overview
NameEY720866
Unique NameEY720866
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length802
Libraries
Library NameType
Sweet orange fruit, development stadium (4 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY720866 vs. ExPASy Swiss-Prot
Match: IF4A_NEOFI (ATP-dependent RNA helicase eIF4A OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / FGSC A1164 / NRRL 181) GN=tif1 PE=3 SV=1)

HSP 1 Score: 206.453 bits (524), Expect = 1.463e-52
Identity = 109/211 (51.66%), Postives = 150/211 (71.09%), Query Frame = 2
Query:  155 EAITSFDAMGIKDDLLRGIYQYGFEKPSAIQQRAVMPIIKGRDVIAQAQSGTGKTSMIALTVCQTVDTSSREVQALILSPTRELATQTEKVILAIGDFINIQAHACVGGKSVGEDIRKLEHGVHVVSGTPGRVCDMIKRKTLRTRAIKLWVLDESDEMRSRRVRDPIICV-PLSSTGSPGLFEFCPPPPQILDMTT----NS*RILAKSRQ 772
            E   SFD+M +K +LLRGIY YGFE+PSAIQQRA++PIIKG DVIAQAQSGTGKT+  +++  Q +D + +  QALIL+PTRELA Q +KV++AIGDF+NI+ HAC+GG +V ED++ L+ G  VV GTPGRV DMI+R+ LRT  +K+++LDE+DEM SR   + I  +  L    +  +      P  +L++TT    +  RIL K ++
Sbjct:   22 EITDSFDSMELKPELLRGIYAYGFERPSAIQQRAILPIIKGNDVIAQAQSGTGKTATFSISALQKLDPNVKGCQALILAPTRELAQQIQKVVVAIGDFMNIECHACIGGTNVREDMKALQEGPQVVVGTPGRVQDMIQRRVLRTDNLKMFILDEADEMLSRGFTEQIYDIFQLLPQSTQVVLLSATMPQDVLEVTTKFMRDPVRILVKKQE 232          
BLAST of EY720866 vs. ExPASy Swiss-Prot
Match: IF4A_ASPCL (ATP-dependent RNA helicase eIF4A OS=Aspergillus clavatus GN=tif1 PE=3 SV=1)

HSP 1 Score: 206.453 bits (524), Expect = 1.463e-52
Identity = 109/211 (51.66%), Postives = 150/211 (71.09%), Query Frame = 2
Query:  155 EAITSFDAMGIKDDLLRGIYQYGFEKPSAIQQRAVMPIIKGRDVIAQAQSGTGKTSMIALTVCQTVDTSSREVQALILSPTRELATQTEKVILAIGDFINIQAHACVGGKSVGEDIRKLEHGVHVVSGTPGRVCDMIKRKTLRTRAIKLWVLDESDEMRSRRVRDPIICV-PLSSTGSPGLFEFCPPPPQILDMTT----NS*RILAKSRQ 772
            E   SFD+M +K +LLRGIY YGFE+PSAIQQRA+MPIIKG DVIAQAQSGTGKT+  +++  Q +D + +  QALIL+PTRELA Q +KV++AIGDF++++ HAC+GG +V ED++ L+ G  VV GTPGRV DMI+R+ LRT  +KL++LDE+DEM SR   + I  +  L    +  +      P  +L++TT    +  RIL K ++
Sbjct:   22 EITDSFDSMDLKPELLRGIYAYGFERPSAIQQRAIMPIIKGSDVIAQAQSGTGKTATFSISALQKIDPNLKACQALILAPTRELAQQIQKVVVAIGDFMSLECHACIGGTNVREDMKALQDGPQVVVGTPGRVQDMIQRRVLRTDQMKLFILDEADEMLSRGFTEQIYDIFQLLPQSTQVVLLSATMPQDVLEVTTKFMRDPVRILVKKQE 232          
BLAST of EY720866 vs. ExPASy Swiss-Prot
Match: IF4A_AJECN (ATP-dependent RNA helicase eIF4A OS=Ajellomyces capsulata (strain NAm1 / WU24) GN=TIF1 PE=3 SV=1)

HSP 1 Score: 206.068 bits (523), Expect = 1.911e-52
Identity = 104/191 (54.45%), Postives = 140/191 (73.30%), Query Frame = 2
Query:  155 EAITSFDAMGIKDDLLRGIYQYGFEKPSAIQQRAVMPIIKGRDVIAQAQSGTGKTSMIALTVCQTVDTSSREVQALILSPTRELATQTEKVILAIGDFINIQAHACVGGKSVGEDIRKLEHGVHVVSGTPGRVCDMIKRKTLRTRAIKLWVLDESDEMRSRRVRDPIICVPLSSTGSPGLFEFCPPPPQIL 727
            E   SFDAM ++ +LLRG+Y YGFE+PSAIQQRA+MP+IKG DVIAQAQSGTGKT+  +++  Q VDT+ +  QALIL+PTRELA Q +KV++AIGDF++I+ HAC+GG SV ED++ L+ G  VV GTPGRV DMI+R+ L+T  +K++VLDE+DEM S    + I            +F+F P   Q++
Sbjct:   22 EITDSFDAMNLRAELLRGVYAYGFERPSAIQQRAIMPVIKGSDVIAQAQSGTGKTATFSISALQKVDTNLKACQALILAPTRELAQQIQKVVVAIGDFMSIECHACIGGISVREDMKALQDGPQVVVGTPGRVHDMIQRRVLKTDHMKMFVLDEADEMLSHGFTEQIY----------DIFQFLPQSTQVV 202          
BLAST of EY720866 vs. ExPASy Swiss-Prot
Match: IF4A_PHANO (ATP-dependent RNA helicase eIF4A OS=Phaeosphaeria nodorum GN=TIF1 PE=3 SV=1)

HSP 1 Score: 204.912 bits (520), Expect = 4.258e-52
Identity = 103/196 (52.55%), Postives = 143/196 (72.96%), Query Frame = 2
Query:  155 EAITSFDAMGIKDDLLRGIYQYGFEKPSAIQQRAVMPIIKGRDVIAQAQSGTGKTSMIALTVCQTVDTSSREVQALILSPTRELATQTEKVILAIGDFINIQAHACVGGKSVGEDIRKLEHGVHVVSGTPGRVCDMIKRKTLRTRAIKLWVLDESDEMRSRRVRDPIICV-PLSSTGSPGLFEFCPPPPQILDMTT 739
            E   SFDAM +K +LLRG+Y YGFE+PSAIQQRA+MP+IKG DVIAQAQSGTGKT+  +++  Q +D++ +  QALIL+PTRELA Q +KV++AIGDF+++  HAC+GG SV +D++ L+ G  VV GTPGRV DMI+R+ L+T  +K++VLDE+DEM SR   + I  +  L    +  +      P  +L++TT
Sbjct:   20 ETTDSFDAMNLKAELLRGVYAYGFERPSAIQQRAIMPVIKGHDVIAQAQSGTGKTATFSISTLQKIDSNVKACQALILAPTRELAQQIQKVVVAIGDFMDVACHACIGGTSVRDDMKALQDGPQVVVGTPGRVHDMIQRRVLKTDHMKMFVLDEADEMLSRGFTEQIYDIFQLLPQSTQVVLLSATMPQDVLEVTT 215          
BLAST of EY720866 vs. ExPASy Swiss-Prot
Match: IF4A_CRYNE (ATP-dependent RNA helicase eIF4A OS=Cryptococcus neoformans GN=TIF1 PE=3 SV=1)

HSP 1 Score: 204.912 bits (520), Expect = 4.258e-52
Identity = 95/167 (56.89%), Postives = 130/167 (77.84%), Query Frame = 2
Query:  155 EAITSFDAMGIKDDLLRGIYQYGFEKPSAIQQRAVMPIIKGRDVIAQAQSGTGKTSMIALTVCQTVDTSSREVQALILSPTRELATQTEKVILAIGDFINIQAHACVGGKSVGEDIRKLEHGVHVVSGTPGRVCDMIKRKTLRTRAIKLWVLDESDEMRSRRVRDPI 655
            E + +FD M +K +LLRGIY YGFE+PSAIQQRA+MPI+ GRD IAQAQSGTGKT+  ++++ Q +DT+ ++ QAL+L+PTRELA Q +KV++A+GD++N+  HACVGG +V EDI +L  G H+V GTPGRV DMI R  L+T A+ ++ LDE+DEM S   ++ I
Sbjct:   25 EVVDNFDDMKLKGELLRGIYAYGFERPSAIQQRAIMPIVTGRDCIAQAQSGTGKTATFSVSILQRIDTTVKKTQALVLAPTRELAQQIQKVVIALGDYLNVDCHACVGGTAVREDIARLNEGPHIVVGTPGRVFDMINRGALKTEAVMMFCLDEADEMLSTGFKESI 191          
BLAST of EY720866 vs. ExPASy Swiss-Prot
Match: IF4A7_TOBAC (Eukaryotic initiation factor 4A-7 OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 204.912 bits (520), Expect = 4.258e-52
Identity = 110/205 (53.66%), Postives = 140/205 (68.29%), Query Frame = 2
Query:  155 EAITSFDAMGIKDDLLRGIYQYGFEKPSAIQQRAVMPIIKGRDVIAQAQSGTGKTSMIALTVCQTVDTSSREVQALILSPTRELATQTEKVILAIGDFINIQAHACVGGKSVGEDIRKLEHGVHVVSGTPGRVCDMIKRKTLRTRAIKLWVLDESDEMRSRRVRDPIICVPLSSTGSPGLFEFCPP-----------PPQILDMT 736
            E   SFDAMG++++LLRGIY YGFEKPSAIQQR ++P  KG DVI QAQSGTGKT+     V Q +D S  E QAL+L+PTRELA Q EKV+ A+GD++ ++ HACVGG SV ED R L+ GVHVV GTPGRV DM++R++LR   IK++VLDE+DEM SR  +D I            +F+  PP           PP+ L++T
Sbjct:   37 EVYDSFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGVLQQLDYSLVECQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQSGVHVVVGTPGRVFDMLRRQSLRPDHIKMFVLDEADEMLSRGFKDQIY----------DIFQLLPPKIQVGVFSATMPPEALEIT 231          
BLAST of EY720866 vs. ExPASy Swiss-Prot
Match: IF4A2_NICPL (Eukaryotic initiation factor 4A-2 OS=Nicotiana plumbaginifolia PE=2 SV=1)

HSP 1 Score: 204.912 bits (520), Expect = 4.258e-52
Identity = 110/205 (53.66%), Postives = 140/205 (68.29%), Query Frame = 2
Query:  155 EAITSFDAMGIKDDLLRGIYQYGFEKPSAIQQRAVMPIIKGRDVIAQAQSGTGKTSMIALTVCQTVDTSSREVQALILSPTRELATQTEKVILAIGDFINIQAHACVGGKSVGEDIRKLEHGVHVVSGTPGRVCDMIKRKTLRTRAIKLWVLDESDEMRSRRVRDPIICVPLSSTGSPGLFEFCPP-----------PPQILDMT 736
            E   SFDAMG++++LLRGIY YGFEKPSAIQQR ++P  KG DVI QAQSGTGKT+     V Q +D S  E QAL+L+PTRELA Q EKV+ A+GD++ ++ HACVGG SV ED R L+ GVHVV GTPGRV DM++R++LR   IK++VLDE+DEM SR  +D I            +F+  PP           PP+ L++T
Sbjct:   37 EVYDSFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGVLQQLDYSLVECQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQSGVHVVVGTPGRVFDMLRRQSLRPDHIKMFVLDEADEMLSRGFKDQIY----------DIFQLLPPKIQVGVFSATMPPEALEIT 231          
BLAST of EY720866 vs. ExPASy Swiss-Prot
Match: IF414_TOBAC (Eukaryotic initiation factor 4A-14 OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 204.912 bits (520), Expect = 4.258e-52
Identity = 110/205 (53.66%), Postives = 140/205 (68.29%), Query Frame = 2
Query:  155 EAITSFDAMGIKDDLLRGIYQYGFEKPSAIQQRAVMPIIKGRDVIAQAQSGTGKTSMIALTVCQTVDTSSREVQALILSPTRELATQTEKVILAIGDFINIQAHACVGGKSVGEDIRKLEHGVHVVSGTPGRVCDMIKRKTLRTRAIKLWVLDESDEMRSRRVRDPIICVPLSSTGSPGLFEFCPP-----------PPQILDMT 736
            E   SFDAMG++++LLRGIY YGFEKPSAIQQR ++P  KG DVI QAQSGTGKT+     V Q +D S  E QAL+L+PTRELA Q EKV+ A+GD++ ++ HACVGG SV ED R L+ GVHVV GTPGRV DM++R++LR   IK++VLDE+DEM SR  +D I            +F+  PP           PP+ L++T
Sbjct:   37 EVYDSFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGVLQQLDYSLVECQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQSGVHVVVGTPGRVFDMLRRQSLRPDHIKMFVLDEADEMLSRGFKDQIY----------DIFQLLPPKIQVGVFSATMPPEALEIT 231          
BLAST of EY720866 vs. ExPASy Swiss-Prot
Match: IF413_TOBAC (Eukaryotic initiation factor 4A-13 (Fragment) OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 204.912 bits (520), Expect = 4.258e-52
Identity = 110/205 (53.66%), Postives = 140/205 (68.29%), Query Frame = 2
Query:  155 EAITSFDAMGIKDDLLRGIYQYGFEKPSAIQQRAVMPIIKGRDVIAQAQSGTGKTSMIALTVCQTVDTSSREVQALILSPTRELATQTEKVILAIGDFINIQAHACVGGKSVGEDIRKLEHGVHVVSGTPGRVCDMIKRKTLRTRAIKLWVLDESDEMRSRRVRDPIICVPLSSTGSPGLFEFCPP-----------PPQILDMT 736
            E   SFDAMG++++LLRGIY YGFEKPSAIQQR ++P  KG DVI QAQSGTGKT+     V Q +D S  E QAL+L+PTRELA Q EKV+ A+GD++ ++ HACVGG SV ED R L+ GVHVV GTPGRV DM++R++LR   IK++VLDE+DEM SR  +D I            +F+  PP           PP+ L++T
Sbjct:   37 EVYDSFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGVLQQLDYSLVECQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQSGVHVVVGTPGRVFDMLRRQSLRPDHIKMFVLDEADEMLSRGFKDQIY----------DIFQLLPPKIQVGVFSATMPPEALEIT 231          
BLAST of EY720866 vs. ExPASy Swiss-Prot
Match: IF410_TOBAC (Eukaryotic initiation factor 4A-10 OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 204.912 bits (520), Expect = 4.258e-52
Identity = 110/205 (53.66%), Postives = 140/205 (68.29%), Query Frame = 2
Query:  155 EAITSFDAMGIKDDLLRGIYQYGFEKPSAIQQRAVMPIIKGRDVIAQAQSGTGKTSMIALTVCQTVDTSSREVQALILSPTRELATQTEKVILAIGDFINIQAHACVGGKSVGEDIRKLEHGVHVVSGTPGRVCDMIKRKTLRTRAIKLWVLDESDEMRSRRVRDPIICVPLSSTGSPGLFEFCPP-----------PPQILDMT 736
            E   SFDAMG++++LLRGIY YGFEKPSAIQQR ++P  KG DVI QAQSGTGKT+     V Q +D S  E QAL+L+PTRELA Q EKV+ A+GD++ ++ HACVGG SV ED R L+ GVHVV GTPGRV DM++R++LR   IK++VLDE+DEM SR  +D I            +F+  PP           PP+ L++T
Sbjct:   37 EVYDSFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGVLQQLDYSLVECQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQSGVHVVVGTPGRVFDMLRRQSLRPDHIKMFVLDEADEMLSRGFKDQIY----------DIFQLLPPKIQVGVFSATMPPEALEIT 231          
The following BLAST results are available for this feature:
BLAST of EY720866 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
IF4A_NEOFI1.463e-5251.66ATP-dependent RNA helicase eIF4A OS=Neosartorya fi... [more]
IF4A_ASPCL1.463e-5251.66ATP-dependent RNA helicase eIF4A OS=Aspergillus cl... [more]
IF4A_AJECN1.911e-5254.45ATP-dependent RNA helicase eIF4A OS=Ajellomyces ca... [more]
IF4A_PHANO4.258e-5252.55ATP-dependent RNA helicase eIF4A OS=Phaeosphaeria ... [more]
IF4A_CRYNE4.258e-5256.89ATP-dependent RNA helicase eIF4A OS=Cryptococcus n... [more]
IF4A7_TOBAC4.258e-5253.66Eukaryotic initiation factor 4A-7 OS=Nicotiana tab... [more]
IF4A2_NICPL4.258e-5253.66Eukaryotic initiation factor 4A-2 OS=Nicotiana plu... [more]
IF414_TOBAC4.258e-5253.66Eukaryotic initiation factor 4A-14 OS=Nicotiana ta... [more]
IF413_TOBAC4.258e-5253.66Eukaryotic initiation factor 4A-13 (Fragment) OS=N... [more]
IF410_TOBAC4.258e-5253.66Eukaryotic initiation factor 4A-10 OS=Nicotiana ta... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-703-015-D09-CT.F Sweet orange fruit, development stadium (4 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY720866 ID=EY720866; Name=EY720866; organism=Citrus sinensis; type=EST; length=802bp
CACGCGTCCGGGAAACTCTCATTGATTCTTTGATTTCGAAGAGTAATTGT
TGCGAATTTCGTGCGAGATGGCGGCGGCGACGGCTATGCGGAGGAGAGGA
GGGGGCGGCGGAATGGATGACGACAAGATGGTGTTCGAAACAACGGAAGG
AGTGGAGGCAATCACGAGCTTCGACGCAATGGGAATAAAAGACGATCTGT
TGCGTGGAATTTATCAGTACGGATTCGAGAAGCCATCGGCCATACAACAG
AGGGCCGTTATGCCAATAATAAAGGGCCGTGATGTAATTGCACAGGCCCA
GTCTGGTACTGGCAAGACCTCTATGATTGCCCTAACTGTTTGCCAGACGG
TCGATACTTCTAGCAGAGAGGTGCAGGCGTTGATTTTGTCACCTACGAGG
GAGTTGGCGACGCAGACAGAGAAAGTGATTTTGGCAATTGGTGATTTTAT
TAACATACAAGCACATGCGTGTGTTGGAGGCAAAAGTGTCGGGGAAGATA
TTAGGAAGTTAGAGCATGGAGTTCATGTGGTGTCTGGAACTCCGGGTAGA
GTCTGTGATATGATTAAGAGGAAAACTTTGCGTACTAGAGCTATTAAATT
ATGGGTGCTTGATGAGTCTGATGAGATGCGGAGCAGAAGGGTCAGGGATC
CAATTATATGTGTACCGCTATCCTCCACCGGATCTCCCGGGTTGTTCGAA
TTCTGCCCCCCTCCCCCCCAAATTTTGGATATGACAACCAATTCATGACG
GATCCTGGCAAAATCTCGGCAAGCGGTGAGAATTGACTTTGGGGGGGAGC
CC
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