EY720866

Overview
NameEY720866
Unique NameEY720866
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length802
Libraries
Library NameType
Sweet orange fruit, development stadium (4 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY720866 vs. ExPASy Swiss-Prot
Match: IF4A1_MOUSE (Eukaryotic initiation factor 4A-I OS=Mus musculus GN=Eif4a1 PE=2 SV=1)

HSP 1 Score: 191.43 bits (485), Expect = 4.871e-48
Identity = 91/168 (54.17%), Postives = 126/168 (75.00%), Query Frame = 2
Query:  155 EAITSFDAMGIKDDLLRGIYQYGFEKPSAIQQRAVMPIIKGRDVIAQAQSGTGKTSMIALTVCQTVDTSSREVQALILSPTRELATQTEKVILAIGDFINIQAHACVGGKSVGEDIRKLE-HGVHVVSGTPGRVCDMIKRKTLRTRAIKLWVLDESDEMRSRRVRDPI 655
            E + SFD M + + LLRGIY YGFEKPSAIQQRA++P IKG DVIAQAQSGTGKT+  A+++ Q ++   +  QAL+L+PTRELA Q +KV++A+GD++    HAC+GG +V  +++KL+    H++ GTPGRV DM+ R+ L  + IK++VLDE+DEM SR  +D I
Sbjct:   29 EIVDSFDDMNLSESLLRGIYAYGFEKPSAIQQRAILPCIKGYDVIAQAQSGTGKTATFAISILQQIELDLKATQALVLAPTRELAQQIQKVVMALGDYMGASCHACIGGTNVRAEVQKLQMEAPHIIVGTPGRVFDMLNRRYLSPKYIKMFVLDEADEMLSRGFKDQI 196          
BLAST of EY720866 vs. ExPASy Swiss-Prot
Match: IF4A1_MACFA (Eukaryotic initiation factor 4A-I OS=Macaca fascicularis GN=EIF4A1 PE=2 SV=1)

HSP 1 Score: 191.43 bits (485), Expect = 4.871e-48
Identity = 91/168 (54.17%), Postives = 126/168 (75.00%), Query Frame = 2
Query:  155 EAITSFDAMGIKDDLLRGIYQYGFEKPSAIQQRAVMPIIKGRDVIAQAQSGTGKTSMIALTVCQTVDTSSREVQALILSPTRELATQTEKVILAIGDFINIQAHACVGGKSVGEDIRKLE-HGVHVVSGTPGRVCDMIKRKTLRTRAIKLWVLDESDEMRSRRVRDPI 655
            E + SFD M + + LLRGIY YGFEKPSAIQQRA++P IKG DVIAQAQSGTGKT+  A+++ Q ++   +  QAL+L+PTRELA Q +KV++A+GD++    HAC+GG +V  +++KL+    H++ GTPGRV DM+ R+ L  + IK++VLDE+DEM SR  +D I
Sbjct:   29 EIVDSFDDMNLSESLLRGIYAYGFEKPSAIQQRAILPCIKGYDVIAQAQSGTGKTATFAISILQQIELDLKATQALVLAPTRELAQQIQKVVMALGDYMGASCHACIGGTNVRAEVQKLQMEAPHIIVGTPGRVFDMLNRRYLSPKYIKMFVLDEADEMLSRGFKDQI 196          
BLAST of EY720866 vs. ExPASy Swiss-Prot
Match: IF4A1_HUMAN (Eukaryotic initiation factor 4A-I OS=Homo sapiens GN=EIF4A1 PE=1 SV=1)

HSP 1 Score: 191.43 bits (485), Expect = 4.871e-48
Identity = 91/168 (54.17%), Postives = 126/168 (75.00%), Query Frame = 2
Query:  155 EAITSFDAMGIKDDLLRGIYQYGFEKPSAIQQRAVMPIIKGRDVIAQAQSGTGKTSMIALTVCQTVDTSSREVQALILSPTRELATQTEKVILAIGDFINIQAHACVGGKSVGEDIRKLE-HGVHVVSGTPGRVCDMIKRKTLRTRAIKLWVLDESDEMRSRRVRDPI 655
            E + SFD M + + LLRGIY YGFEKPSAIQQRA++P IKG DVIAQAQSGTGKT+  A+++ Q ++   +  QAL+L+PTRELA Q +KV++A+GD++    HAC+GG +V  +++KL+    H++ GTPGRV DM+ R+ L  + IK++VLDE+DEM SR  +D I
Sbjct:   29 EIVDSFDDMNLSESLLRGIYAYGFEKPSAIQQRAILPCIKGYDVIAQAQSGTGKTATFAISILQQIELDLKATQALVLAPTRELAQQIQKVVMALGDYMGASCHACIGGTNVRAEVQKLQMEAPHIIVGTPGRVFDMLNRRYLSPKYIKMFVLDEADEMLSRGFKDQI 196          
BLAST of EY720866 vs. ExPASy Swiss-Prot
Match: IF4A1_BOVIN (Eukaryotic initiation factor 4A-I OS=Bos taurus GN=EIF4A1 PE=2 SV=1)

HSP 1 Score: 191.43 bits (485), Expect = 4.871e-48
Identity = 91/168 (54.17%), Postives = 126/168 (75.00%), Query Frame = 2
Query:  155 EAITSFDAMGIKDDLLRGIYQYGFEKPSAIQQRAVMPIIKGRDVIAQAQSGTGKTSMIALTVCQTVDTSSREVQALILSPTRELATQTEKVILAIGDFINIQAHACVGGKSVGEDIRKLE-HGVHVVSGTPGRVCDMIKRKTLRTRAIKLWVLDESDEMRSRRVRDPI 655
            E + SFD M + + LLRGIY YGFEKPSAIQQRA++P IKG DVIAQAQSGTGKT+  A+++ Q ++   +  QAL+L+PTRELA Q +KV++A+GD++    HAC+GG +V  +++KL+    H++ GTPGRV DM+ R+ L  + IK++VLDE+DEM SR  +D I
Sbjct:   29 EIVDSFDDMNLSESLLRGIYAYGFEKPSAIQQRAILPCIKGYDVIAQAQSGTGKTATFAISILQQIELDLKATQALVLAPTRELAQQIQKVVMALGDYMGASCHACIGGTNVRAEVQKLQMEAPHIIVGTPGRVFDMLNRRYLSPKYIKMFVLDEADEMLSRGFKDQI 196          
BLAST of EY720866 vs. ExPASy Swiss-Prot
Match: IF4A2_MACFA (Eukaryotic initiation factor 4A-II OS=Macaca fascicularis GN=EIF4A2 PE=2 SV=1)

HSP 1 Score: 191.045 bits (484), Expect = 6.362e-48
Identity = 94/168 (55.95%), Postives = 127/168 (75.60%), Query Frame = 2
Query:  155 EAITSFDAMGIKDDLLRGIYQYGFEKPSAIQQRAVMPIIKGRDVIAQAQSGTGKTSMIALTVCQTVDTSSREVQALILSPTRELATQTEKVILAIGDFINIQAHACVGGKSVGEDIRKLE-HGVHVVSGTPGRVCDMIKRKTLRTRAIKLWVLDESDEMRSRRVRDPI 655
            E + +FD M +K+ LLRGIY YGFEKPSAIQQRA++P IKG DVIAQAQSGTGKT+  A+++ Q ++   +E QAL+L+PTRELA Q +KVILA+GD++    HAC+GG +V  +++KL+    H+V GTPGRV DM+ R+ L  + IK++VLDE+D M SR  +D I
Sbjct:   31 EIVDNFDDMNLKESLLRGIYAYGFEKPSAIQQRAIIPCIKGYDVIAQAQSGTGKTATFAISILQQLEIEFKETQALVLAPTRELAQQIQKVILALGDYMGATCHACIGGTNVRNEMQKLQAEAPHIVVGTPGRVFDMLNRRYLSPKWIKMFVLDEADGMLSRGFKDQI 198          
BLAST of EY720866 vs. ExPASy Swiss-Prot
Match: FAL1_YEAST (ATP-dependent RNA helicase FAL1 OS=Saccharomyces cerevisiae GN=FAL1 PE=1 SV=1)

HSP 1 Score: 189.504 bits (480), Expect = 1.851e-47
Identity = 90/171 (52.63%), Postives = 133/171 (77.78%), Query Frame = 2
Query:  125 KMVFETTEGVEAITSFDAMGIKDDLLRGIYQYGFEKPSAIQQRAVMPIIKGRDVIAQAQSGTGKTSMIALTVCQTVDTSSREVQALILSPTRELATQTEKVILAIGDFINIQAHACVGGKSVGEDIRKLE-HGVHVVSGTPGRVCDMIKRKTLRTRAIKLWVLDESDEMRS 634
            K+ F+T++ ++  ++F++M +KDDLLRGIY YGFE PS+IQ RA+  II G+DVIAQAQSGTGKT+   + + Q +D   +++QALILSPTRELA+Q  +V+  +GD++N+ A A  GGK++ +D++K++ HG   VSGTPGRV DMIK++ L+TR +++ VLDE+DE+ S
Sbjct:   10 KLKFKTSKKLKVSSTFESMNLKDDLLRGIYSYGFEAPSSIQSRAITQIISGKDVIAQAQSGTGKTATFTIGLLQAIDLRKKDLQALILSPTRELASQIGQVVKNLGDYMNVNAFAITGGKTLKDDLKKMQKHGCQAVSGTPGRVLDMIKKQMLQTRNVQMLVLDEADELLS 180          
BLAST of EY720866 vs. ExPASy Swiss-Prot
Match: FAL1_YEAS7 (ATP-dependent RNA helicase FAL1 OS=Saccharomyces cerevisiae (strain YJM789) GN=FAL1 PE=3 SV=1)

HSP 1 Score: 189.504 bits (480), Expect = 1.851e-47
Identity = 90/171 (52.63%), Postives = 133/171 (77.78%), Query Frame = 2
Query:  125 KMVFETTEGVEAITSFDAMGIKDDLLRGIYQYGFEKPSAIQQRAVMPIIKGRDVIAQAQSGTGKTSMIALTVCQTVDTSSREVQALILSPTRELATQTEKVILAIGDFINIQAHACVGGKSVGEDIRKLE-HGVHVVSGTPGRVCDMIKRKTLRTRAIKLWVLDESDEMRS 634
            K+ F+T++ ++  ++F++M +KDDLLRGIY YGFE PS+IQ RA+  II G+DVIAQAQSGTGKT+   + + Q +D   +++QALILSPTRELA+Q  +V+  +GD++N+ A A  GGK++ +D++K++ HG   VSGTPGRV DMIK++ L+TR +++ VLDE+DE+ S
Sbjct:   10 KLKFKTSKKLKVSSTFESMNLKDDLLRGIYSYGFEAPSSIQSRAITQIISGKDVIAQAQSGTGKTATFTIGLLQAIDLRKKDLQALILSPTRELASQIGQVVKNLGDYMNVNAFAITGGKTLKDDLKKMQKHGCQAVSGTPGRVLDMIKKQMLQTRNVQMLVLDEADELLS 180          
BLAST of EY720866 vs. ExPASy Swiss-Prot
Match: FAL1_CANGA (ATP-dependent RNA helicase FAL1 OS=Candida glabrata GN=FAL1 PE=3 SV=1)

HSP 1 Score: 187.578 bits (475), Expect = 7.034e-47
Identity = 88/171 (51.46%), Postives = 131/171 (76.61%), Query Frame = 2
Query:  125 KMVFETTEGVEAITSFDAMGIKDDLLRGIYQYGFEKPSAIQQRAVMPIIKGRDVIAQAQSGTGKTSMIALTVCQTVDTSSREVQALILSPTRELATQTEKVILAIGDFINIQAHACVGGKSVGEDIRKLE-HGVHVVSGTPGRVCDMIKRKTLRTRAIKLWVLDESDEMRS 634
            K+ F++++ ++   +F++M +K+ LLRGIY YGFE PSAIQ RA+  II G+DVIAQAQSGTGKT+   + + Q +D    ++QAL+LSPTRELA Q  KV+  +GD++N++A+A  GGK++ +D++K++ HG  V+SGTPGRV DMIKR+ + TR +++ VLDE+DE+ S
Sbjct:   10 KLKFKSSKKLKISATFESMDLKEGLLRGIYSYGFEAPSAIQSRAITQIISGKDVIAQAQSGTGKTATFTIGMLQAIDLKKHDLQALVLSPTRELAAQIGKVVTNLGDYMNVKAYAMTGGKTMKDDLKKIQKHGCQVISGTPGRVLDMIKRRLIETRHVQILVLDEADELLS 180          
BLAST of EY720866 vs. ExPASy Swiss-Prot
Match: IF4A_CRYPV (Eukaryotic initiation factor 4A OS=Cryptosporidium parvum GN=EIF4-A PE=2 SV=1)

HSP 1 Score: 186.037 bits (471), Expect = 2.047e-46
Identity = 103/212 (48.58%), Postives = 137/212 (64.62%), Query Frame = 2
Query:  155 EAITSFDAMGIKDDLLRGIYQYGFEKPSAIQQRAVMPIIKGRDVIAQAQSGTGKTSMIALTVCQTVDTSSREVQALILSPTRELATQTEKVILAIGDFINIQAHACVGGKSVGEDIRKLEHGVHVVSGTPGRVCDMIKRKTLRTRAIKLWVLDESDEMRSR--RVRDPIICVPLSSTGSPGLFEFCPPPPQILDMTT----NS*RILAKSRQ 772
            E +  F+A+ ++ DLLRGI+ YGFEKPSAIQQR + PI+ G D I QAQSGTGKT+   +   Q +D S    Q L+L+PTRELA Q +KV LA+GD+  ++ HACVGG SV +D+ KL+ GVH+V GTPGRV DM+ +  LR   +KL++LDE+DEM SR  +V+   I   L       LF     P +IL +TT    +  RIL K  +
Sbjct:   28 EIVECFEALNLEGDLLRGIFAYGFEKPSAIQQRGIKPILDGYDTIGQAQSGTGKTATFVIAALQKIDYSLNACQVLLLAPTRELAQQIQKVALALGDYCELRCHACVGGTSVRDDMNKLKSGVHMVVGTPGRVFDMLDKGYLRVDNLKLFILDEADEMLSRGFKVQIHDIFKKLPQDVQVALFS-ATMPNEILHLTTQFMRDPKRILVKQEE 238          
BLAST of EY720866 vs. ExPASy Swiss-Prot
Match: IF4A1_PONAB (Eukaryotic initiation factor 4A-I OS=Pongo abelii GN=EIF4A1 PE=2 SV=1)

HSP 1 Score: 186.037 bits (471), Expect = 2.047e-46
Identity = 89/168 (52.98%), Postives = 124/168 (73.81%), Query Frame = 2
Query:  155 EAITSFDAMGIKDDLLRGIYQYGFEKPSAIQQRAVMPIIKGRDVIAQAQSGTGKTSMIALTVCQTVDTSSREVQALILSPTRELATQTEKVILAIGDFINIQAHACVGGKSVGEDIRKLE-HGVHVVSGTPGRVCDMIKRKTLRTRAIKLWVLDESDEMRSRRVRDPI 655
            E + S D M + + LLRGIY YGFEKPSAIQQRA++  IKG DVIAQAQSGTGKT+  A+++ Q ++   +  QAL+L+PTRELA Q +KV++A+GD++    HAC+GG +V  +++KL+    H++ GTPGRV DM+ R+ L  + IK++VLDE+DEM SR  +D I
Sbjct:   29 EIVDSLDDMNLSESLLRGIYAYGFEKPSAIQQRAILSCIKGYDVIAQAQSGTGKTATFAISILQQIELDLKATQALVLAPTRELAQQIQKVVMALGDYMGASCHACIGGTNVRAEVQKLQMEAPHIIVGTPGRVFDMLNRRYLSPKYIKMFVLDEADEMLSRGFKDQI 196          
The following BLAST results are available for this feature:
BLAST of EY720866 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
IF4A1_MOUSE4.871e-4854.17Eukaryotic initiation factor 4A-I OS=Mus musculus ... [more]
IF4A1_MACFA4.871e-4854.17Eukaryotic initiation factor 4A-I OS=Macaca fascic... [more]
IF4A1_HUMAN4.871e-4854.17Eukaryotic initiation factor 4A-I OS=Homo sapiens ... [more]
IF4A1_BOVIN4.871e-4854.17Eukaryotic initiation factor 4A-I OS=Bos taurus GN... [more]
IF4A2_MACFA6.362e-4855.95Eukaryotic initiation factor 4A-II OS=Macaca fasci... [more]
FAL1_YEAST1.851e-4752.63ATP-dependent RNA helicase FAL1 OS=Saccharomyces c... [more]
FAL1_YEAS71.851e-4752.63ATP-dependent RNA helicase FAL1 OS=Saccharomyces c... [more]
FAL1_CANGA7.034e-4751.46ATP-dependent RNA helicase FAL1 OS=Candida glabrat... [more]
IF4A_CRYPV2.047e-4648.58Eukaryotic initiation factor 4A OS=Cryptosporidium... [more]
IF4A1_PONAB2.047e-4652.98Eukaryotic initiation factor 4A-I OS=Pongo abelii ... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-703-015-D09-CT.F Sweet orange fruit, development stadium (4 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY720866 ID=EY720866; Name=EY720866; organism=Citrus sinensis; type=EST; length=802bp
CACGCGTCCGGGAAACTCTCATTGATTCTTTGATTTCGAAGAGTAATTGT
TGCGAATTTCGTGCGAGATGGCGGCGGCGACGGCTATGCGGAGGAGAGGA
GGGGGCGGCGGAATGGATGACGACAAGATGGTGTTCGAAACAACGGAAGG
AGTGGAGGCAATCACGAGCTTCGACGCAATGGGAATAAAAGACGATCTGT
TGCGTGGAATTTATCAGTACGGATTCGAGAAGCCATCGGCCATACAACAG
AGGGCCGTTATGCCAATAATAAAGGGCCGTGATGTAATTGCACAGGCCCA
GTCTGGTACTGGCAAGACCTCTATGATTGCCCTAACTGTTTGCCAGACGG
TCGATACTTCTAGCAGAGAGGTGCAGGCGTTGATTTTGTCACCTACGAGG
GAGTTGGCGACGCAGACAGAGAAAGTGATTTTGGCAATTGGTGATTTTAT
TAACATACAAGCACATGCGTGTGTTGGAGGCAAAAGTGTCGGGGAAGATA
TTAGGAAGTTAGAGCATGGAGTTCATGTGGTGTCTGGAACTCCGGGTAGA
GTCTGTGATATGATTAAGAGGAAAACTTTGCGTACTAGAGCTATTAAATT
ATGGGTGCTTGATGAGTCTGATGAGATGCGGAGCAGAAGGGTCAGGGATC
CAATTATATGTGTACCGCTATCCTCCACCGGATCTCCCGGGTTGTTCGAA
TTCTGCCCCCCTCCCCCCCAAATTTTGGATATGACAACCAATTCATGACG
GATCCTGGCAAAATCTCGGCAAGCGGTGAGAATTGACTTTGGGGGGGAGC
CC
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