EY680185

Overview
NameEY680185
Unique NameEY680185
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length848
Libraries
Library NameType
Sweet orange leaf, young greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of EY680185 vs. ExPASy Swiss-Prot
Match: PTAD2_BOVIN (Protein tyrosine phosphatase-like protein PTPLAD2 OS=Bos taurus GN=PTPLAD2 PE=2 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 3.036e-11
Identity = 45/203 (22.17%), Postives = 96/203 (47.29%), Query Frame = 3 
Query:   30 RRLYLTAYNWTVFAGWAQV---LYLALKTLNESGHENVYKAVERPLQLAQTAAVLEILHGLLGLVRSPITATLPQISSRLYVTWGILWSFPQTQNHXXXXXXXXXXXXTEIIRYSFFGMKEALGFAPSWLLWLRYSTFLLLYPSGITSEVGLIYTALPYIKESETYCLRMPNKWNFSFDY---FYAAILVLGFYVPGSPHMYT 620
            +  YL  Y    F G + +   + +   +  +    + + A+   +QL Q+ ++LE+LH  +G+  + +   + Q++ R+ V + ++ S  + Q               +++RY++  M   +G + + L W   + ++ +YP  + +E   IY +LPY +   TY  ++P   +F F Y    Y  +L +G Y   + H+Y+
Sbjct:   16 KNAYLFIYYLIQFCGHSWIFTNMTVRFFSFGKDSMVDTFYAIGLVMQLCQSISLLELLHIYVGIESNHLLPRILQLTERIIVLFMVITSQEEVQEKYVVCVLFIFRNLLDMVRYTY-SMLSVIGISYAVLTWFSQTLWMPIYPLCVLAEAFTIYQSLPYFESFGTYSTKLPFDLSFYFPYVLKIYLMMLFVGMYFTYN-HLYS 216
[Close]
BLAST of EY680185 vs. ExPASy Swiss-Prot
Match: PTAD2_HUMAN (Protein tyrosine phosphatase-like protein PTPLAD2 OS=Homo sapiens GN=PTPLAD2 PE=2 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 8.834e-11
Identity = 44/203 (21.67%), Postives = 95/203 (46.80%), Query Frame = 3 
Query:   30 RRLYLTAYNWTVFAGWAQV---LYLALKTLNESGHENVYKAVERPLQLAQTAAVLEILHGLLGLVRSPITATLPQISSRLYVTWGILWSFPQTQNHXXXXXXXXXXXXTEIIRYSFFGMKEALGFAPSWLLWLRYSTFLLLYPSGITSEVGLIYTALPYIKESETYCLRMPNKWNFSFDY---FYAAILVLGFYVPGSPHMYT 620
            +  YL  Y    F G + +   + +   +  +    + + A+   ++L Q+ ++LE+LH  +G+  + +     Q++ R+ + + ++ S  + Q               +++RY++  M   +G + + L WL  + ++ +YP  + +E   IY +LPY +   TY  ++P   +  F Y    Y  +L +G Y   S H+Y+
Sbjct:   16 KNAYLFIYYLIQFCGHSWIFTNMTVRFFSFGKDSMVDTFYAIGLVMRLCQSVSLLELLHIYVGIESNHLLPRFLQLTERIIILFVVITSQEEVQEKYVVCVLFVFWNLLDMVRYTY-SMLSVIGISYAVLTWLSQTLWMPIYPLCVLAEAFAIYQSLPYFESFGTYSTKLPFDLSIYFPYVLKIYLMMLFIGMYFTYS-HLYS 216
The following BLAST results are available for this feature:
BLAST of EY680185 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 22
Match NameE-valueIdentityDescription
PTAD2_BOVIN3.036e-1122.17Protein tyrosine phosphatase-like protein PTPLAD2 ... [more]
PTAD2_HUMAN8.834e-1121.67Protein tyrosine phosphatase-like protein PTPLAD2 ... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-650-008-C11-CT.F Sweet orange leaf, young greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY680185 ID=EY680185; Name=EY680185; organism=Citrus sinensis; type=EST; length=848bp
CCACGCGTCCGGGTTGTTTGTCGCTTCTCAGACGCCTGTACCTCACTGCC
TACAACTGGACCGTCTTTGCCGGATGGGCCCAGGTTTTGTACCTTGCTTT
GAAGACTTTAAACGAGTCCGGCCACGAAAATGTCTACAAAGCCGTCGAAA
GGCCTCTCCAGCTCGCCCAAACCGCCGCCGTTTTGGAGATTCTTCATGGT
CTTCTAGGCTTGGTGAGATCTCCAATAACAGCTACACTGCCACAAATTAG
CTCTAGATTGTATGTTACATGGGGCATTTTATGGAGTTTTCCTCAGACTC
AGAATCATATACTTGTTAGTTCATTGGTGATCAGCTGGTCCTTAACTGAG
ATTATTCGCTACTCTTTCTTTGGCATGAAGGAGGCACTTGGTTTTGCACC
TTCATGGCTCTTGTGGCTGAGGTATAGCACATTTTTGCTGTTGTATCCAT
CTGGCATTACGAGTGAAGTTGGTCTTATTTACACTGCCCTTCCATACATA
AAAGAATCCGAGACGTATTGTCTTAGAATGCCAAACAAATGGAATTTCTC
TTTTGACTACTTCTACGCTGCAATTCTTGTGCTTGGATTCTATGTGCCAG
GTAGTCCTCATATGTATACATATATTGCTTGGGCAGAGGAAGAAAAGCCC
TTTCAAATCCAAAAAAGAGTAAAATGGTTTTTTAACTGCCATGGCTACCA
GGGTATCCTATCAAAAATCTTGAAAAAATTTTTGGTTGTTTATAATAAAT
TAACCTAACCTTTTCCCCCAAAAAAAAAAAAAAAAAGGGGGGCCGCCTCA
AAAGGATCCAAACTAAAATACCCGGGGATGGCAAAGTCCAAAACTTTT
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