FC922002

Overview
NameFC922002
Unique NameFC922002
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length368
Libraries
Library NameType
RindPdigScdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC922002 vs. ExPASy Swiss-Prot
Match: HSP73_DROME (Major heat shock 70 kDa protein Bb OS=Drosophila melanogaster GN=Hsp70Bb PE=2 SV=2)

HSP 1 Score: 144.05 bits (362), Expect = 2.149e-34
Identity = 68/77 (88.31%), Postives = 73/77 (94.81%), Query Frame = 3
Query:  135 PAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDP 365
            PAIGIDLGTTYSCVGV+QH +VEIIANDQGNRTTPSYVAFTD+ERLIGD AKNQVAMNP NTVFDAKRLIGR++ DP
Sbjct:    2 PAIGIDLGTTYSCVGVYQHGKVEIIANDQGNRTTPSYVAFTDSERLIGDPAKNQVAMNPRNTVFDAKRLIGRKYDDP 78          
BLAST of FC922002 vs. ExPASy Swiss-Prot
Match: HSP72_DROSI (Major heat shock 70 kDa protein Ba OS=Drosophila simulans GN=Hsp70Ba PE=2 SV=2)

HSP 1 Score: 144.05 bits (362), Expect = 2.149e-34
Identity = 68/77 (88.31%), Postives = 73/77 (94.81%), Query Frame = 3
Query:  135 PAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDP 365
            PAIGIDLGTTYSCVGV+QH +VEIIANDQGNRTTPSYVAFTD+ERLIGD AKNQVAMNP NTVFDAKRLIGR++ DP
Sbjct:    2 PAIGIDLGTTYSCVGVYQHGKVEIIANDQGNRTTPSYVAFTDSERLIGDPAKNQVAMNPRNTVFDAKRLIGRKYDDP 78          
BLAST of FC922002 vs. ExPASy Swiss-Prot
Match: HSP72_DROME (Major heat shock 70 kDa protein Ba OS=Drosophila melanogaster GN=Hsp70Ba PE=2 SV=2)

HSP 1 Score: 144.05 bits (362), Expect = 2.149e-34
Identity = 68/77 (88.31%), Postives = 73/77 (94.81%), Query Frame = 3
Query:  135 PAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDP 365
            PAIGIDLGTTYSCVGV+QH +VEIIANDQGNRTTPSYVAFTD+ERLIGD AKNQVAMNP NTVFDAKRLIGR++ DP
Sbjct:    2 PAIGIDLGTTYSCVGVYQHGKVEIIANDQGNRTTPSYVAFTDSERLIGDPAKNQVAMNPRNTVFDAKRLIGRKYDDP 78          
BLAST of FC922002 vs. ExPASy Swiss-Prot
Match: HSP71_DROME (Major heat shock 70 kDa protein Ab OS=Drosophila melanogaster GN=Hsp70Ab PE=1 SV=3)

HSP 1 Score: 144.05 bits (362), Expect = 2.149e-34
Identity = 68/77 (88.31%), Postives = 73/77 (94.81%), Query Frame = 3
Query:  135 PAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDP 365
            PAIGIDLGTTYSCVGV+QH +VEIIANDQGNRTTPSYVAFTD+ERLIGD AKNQVAMNP NTVFDAKRLIGR++ DP
Sbjct:    2 PAIGIDLGTTYSCVGVYQHGKVEIIANDQGNRTTPSYVAFTDSERLIGDPAKNQVAMNPRNTVFDAKRLIGRKYDDP 78          
BLAST of FC922002 vs. ExPASy Swiss-Prot
Match: HSP70_DROME (Major heat shock 70 kDa protein Aa OS=Drosophila melanogaster GN=Hsp70Aa PE=2 SV=2)

HSP 1 Score: 144.05 bits (362), Expect = 2.149e-34
Identity = 68/77 (88.31%), Postives = 73/77 (94.81%), Query Frame = 3
Query:  135 PAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDP 365
            PAIGIDLGTTYSCVGV+QH +VEIIANDQGNRTTPSYVAFTD+ERLIGD AKNQVAMNP NTVFDAKRLIGR++ DP
Sbjct:    2 PAIGIDLGTTYSCVGVYQHGKVEIIANDQGNRTTPSYVAFTDSERLIGDPAKNQVAMNPRNTVFDAKRLIGRKYDDP 78          
BLAST of FC922002 vs. ExPASy Swiss-Prot
Match: HSP71_ORYLA (Heat shock 70 kDa protein 1 OS=Oryzias latipes PE=3 SV=1)

HSP 1 Score: 143.665 bits (361), Expect = 2.806e-34
Identity = 68/76 (89.47%), Postives = 74/76 (97.37%), Query Frame = 3
Query:  138 AIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDP 365
            +IGIDLGTTYSCVGV+QH +VEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA+NP+NTVFDAKRLIGRRF +P
Sbjct:    8 SIGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVALNPSNTVFDAKRLIGRRFDEP 83          
BLAST of FC922002 vs. ExPASy Swiss-Prot
Match: HSP70_LEIDO (Heat shock 70 kDa protein OS=Leishmania donovani GN=HSP70 PE=3 SV=1)

HSP 1 Score: 143.665 bits (361), Expect = 2.806e-34
Identity = 68/75 (90.67%), Postives = 74/75 (98.67%), Query Frame = 3
Query:  138 AIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSD 362
            AIGIDLGTTYSCVGVWQ++RV+IIANDQGNRTTPSYVAFTD+ERLIGDAAKNQVAMNP NTVFDAKRLIGR+F+D
Sbjct:    6 AIGIDLGTTYSCVGVWQNERVDIIANDQGNRTTPSYVAFTDSERLIGDAAKNQVAMNPHNTVFDAKRLIGRKFND 80          
BLAST of FC922002 vs. ExPASy Swiss-Prot
Match: HS7C3_DICDI (Heat shock cognate 70 kDa protein 3 OS=Dictyostelium discoideum GN=DDB_G0293674 PE=3 SV=1)

HSP 1 Score: 143.665 bits (361), Expect = 2.806e-34
Identity = 69/75 (92.00%), Postives = 72/75 (96.00%), Query Frame = 3
Query:  138 AIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSD 362
            +IGIDLGTTYSCVGVW +DRVEIIANDQGNRTTPSYVAF DTERLIGDAAKNQVAMNP NTVFDAKRLIGR+FSD
Sbjct:    3 SIGIDLGTTYSCVGVWLNDRVEIIANDQGNRTTPSYVAFNDTERLIGDAAKNQVAMNPINTVFDAKRLIGRKFSD 77          
BLAST of FC922002 vs. ExPASy Swiss-Prot
Match: HSP7A_DROSI (Heat shock 70 kDa protein cognate 1 (Fragments) OS=Drosophila simulans GN=Hsc70-1 PE=2 SV=1)

HSP 1 Score: 143.28 bits (360), Expect = 3.665e-34
Identity = 67/76 (88.16%), Postives = 73/76 (96.05%), Query Frame = 3
Query:  135 PAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSD 362
            PA+GIDLGTTYSCVGV+QH +VEIIANDQGNRTTPSYVAFT++ERLIGDAAKNQVAMNP NT+FDAKRLIGRRF D
Sbjct:    5 PAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTESERLIGDAAKNQVAMNPNNTIFDAKRLIGRRFDD 80          
BLAST of FC922002 vs. ExPASy Swiss-Prot
Match: HSP7A_DROME (Heat shock 70 kDa protein cognate 1 OS=Drosophila melanogaster GN=Hsc70-1 PE=1 SV=1)

HSP 1 Score: 143.28 bits (360), Expect = 3.665e-34
Identity = 67/76 (88.16%), Postives = 73/76 (96.05%), Query Frame = 3
Query:  135 PAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSD 362
            PA+GIDLGTTYSCVGV+QH +VEIIANDQGNRTTPSYVAFT++ERLIGDAAKNQVAMNP NT+FDAKRLIGRRF D
Sbjct:    5 PAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTESERLIGDAAKNQVAMNPNNTIFDAKRLIGRRFDD 80          
The following BLAST results are available for this feature:
BLAST of FC922002 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
HSP73_DROME2.149e-3488.31Major heat shock 70 kDa protein Bb OS=Drosophila m... [more]
HSP72_DROSI2.149e-3488.31Major heat shock 70 kDa protein Ba OS=Drosophila s... [more]
HSP72_DROME2.149e-3488.31Major heat shock 70 kDa protein Ba OS=Drosophila m... [more]
HSP71_DROME2.149e-3488.31Major heat shock 70 kDa protein Ab OS=Drosophila m... [more]
HSP70_DROME2.149e-3488.31Major heat shock 70 kDa protein Aa OS=Drosophila m... [more]
HSP71_ORYLA2.806e-3489.47Heat shock 70 kDa protein 1 OS=Oryzias latipes PE=... [more]
HSP70_LEIDO2.806e-3490.67Heat shock 70 kDa protein OS=Leishmania donovani G... [more]
HS7C3_DICDI2.806e-3492.00Heat shock cognate 70 kDa protein 3 OS=Dictyosteli... [more]
HSP7A_DROSI3.665e-3488.16Heat shock 70 kDa protein cognate 1 (Fragments) OS... [more]
HSP7A_DROME3.665e-3488.16Heat shock 70 kDa protein cognate 1 OS=Drosophila ... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionC06056D11T7 RindPdigS Citrus sinensis cDNA clone C06056D11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC922002 ID=FC922002; Name=FC922002; organism=Citrus sinensis; type=EST; length=368bp
CGCGGGGACGGAAACGGACTAACAATCAATAAGTAAACACTCAAGCTCGC
AAATCATCCGTGCTTTTTTTCTTTTTTTTTTTATTGTTGATAGATTCTTG
ATTTTGTTAATCGACGGCTGGAAAAGGCGAAGGTCCTGCTATTGGAATTG
ACTTGGGCACGACTTACTCTTGTGTCGGTGTCTGGCAACATGATCGAGTT
GAGATCATCGCTAATGATCAAGGTAACCGAACGACGCCGTCTTATGTGGC
GTTTACTGATACGGAGCGTTTGATCGGTGATGCTGCCAAGAACCAGGTCG
CCATGAACCCCACCAACACTGTTTTTGATGCTAAGCGTTTGATTGGGAGG
CGATTCAGTGATCCTTCA
back to top