EG358228

Overview
NameEG358228
Unique NameEG358228
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length356
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EG358228 vs. ExPASy Swiss-Prot
Match: DFRA_HORVU (Dihydroflavonol-4-reductase OS=Hordeum vulgare GN=ANT18 PE=3 SV=1)

HSP 1 Score: 156.762 bits (395), Expect = 3.252e-38
Identity = 73/116 (62.93%), Postives = 93/116 (80.17%), Query Frame = -2
Query:    2 PSLVVGPFLTSSMPPSLITALSPITRNEAHYPIIKQGQFVHLDDLCSAHIFLFEHPNAKGRYICSSHPATILELAKFLREKYPEFNVPTEFEDVDENMKNMLFSSKKLTDLGFKFK 349
            P+LVVGPFL++ MPPSL+TAL+ IT NEAHY I+KQ Q VHLDDLC A  FLFEHP A GRYICSSH ATI  LA+ L++++PE+++P +F  VD+N++ + FSSKKL D GF F+
Sbjct:  190 PTLVVGPFLSAGMPPSLVTALALITGNEAHYSILKQVQLVHLDDLCDAMTFLFEHPEANGRYICSSHDATIHGLARMLQDRFPEYDIPQKFAGVDDNLQPIHFSSKKLLDHGFSFR 305          
BLAST of EG358228 vs. ExPASy Swiss-Prot
Match: DFRA_MAIZE (Dihydroflavonol-4-reductase OS=Zea mays GN=A1 PE=3 SV=1)

HSP 1 Score: 150.214 bits (378), Expect = 3.044e-36
Identity = 70/116 (60.34%), Postives = 90/116 (77.59%), Query Frame = -2
Query:    2 PSLVVGPFLTSSMPPSLITALSPITRNEAHYPIIKQGQFVHLDDLCSAHIFLFEHPNAKGRYICSSHPATILELAKFLREKYPEFNVPTEFEDVDENMKNMLFSSKKLTDLGFKFK 349
            P+LVVGPF+++SMPPSLITAL+ IT N  HY I+KQ Q +HLDDLC A IFLFE+P A GRY+CSSH  TI  LA  LR++YPE++VP  F  + ++++ + FSSKKL DLGF F+
Sbjct:  195 PTLVVGPFISASMPPSLITALALITGNAPHYSILKQVQLIHLDDLCDAEIFLFENPAAAGRYVCSSHDVTIHGLAAMLRDRYPEYDVPQRFPGIQDDLQPVRFSSKKLQDLGFTFR 310          
BLAST of EG358228 vs. ExPASy Swiss-Prot
Match: BAN_ARATH (Leucoanthocyanidin reductase OS=Arabidopsis thaliana GN=BAN PE=1 SV=2)

HSP 1 Score: 90.8929 bits (224), Expect = 2.192e-18
Identity = 50/123 (40.65%), Postives = 76/123 (61.79%), Query Frame = -2
Query:    2 PSLVVGPFLTSSMPPSLITALSPITRNEAHYPIIKQGQ-------FVHLDDLCSAHIFLFEHPNAKGRYICSSHPATILELAKFLREKYPEFNVPTEFEDVDENMKNMLFSSKKLTDLGFKFK 349
            P+L+ G  L S  P SL  ++S IT  E H   +K+ Q       FVH+DDL  AH+FL E   A GRYIC ++  ++ E+A FL ++YP++NV +EFE+   ++  +  SS+KL + GF+F+
Sbjct:  196 PALIAGNSLLSDPPSSLSLSMSFITGKEMHVTGLKEMQKLSGSISFVHVDDLARAHLFLAEKETASGRYICCAYNTSVPEIADFLIQRYPKYNVLSEFEE-GLSIPKLTLSSQKLINEGFRFE 317          
BLAST of EG358228 vs. ExPASy Swiss-Prot
Match: DFRA_MEDSA (Dihydroflavonol-4-reductase (Fragment) OS=Medicago sativa GN=DFR1 PE=2 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 5.053e-15
Identity = 38/45 (84.44%), Postives = 40/45 (88.89%), Query Frame = -2
Query:  215 PSLVVGPFLTSSMPPSLITALSPITRNEAHYPIIKQGQFVHLDDL 349
            P LVVGPFL  +MPPSLITALSPIT NEAHY IIKQGQ+VHLDDL
Sbjct:  173 PPLVVGPFLIPTMPPSLITALSPITGNEAHYSIIKQGQYVHLDDL 217          
The following BLAST results are available for this feature:
BLAST of EG358228 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 14
Match NameE-valueIdentityDescription
DFRA_HORVU3.252e-3862.93Dihydroflavonol-4-reductase OS=Hordeum vulgare GN=... [more]
DFRA_MAIZE3.044e-3660.34Dihydroflavonol-4-reductase OS=Zea mays GN=A1 PE=3... [more]
BAN_ARATH2.192e-1840.65Leucoanthocyanidin reductase OS=Arabidopsis thalia... [more]
DFRA_MEDSA5.053e-1584.44Dihydroflavonol-4-reductase (Fragment) OS=Medicago... [more]

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Properties
Property NameValue
Genbank description4b7 Citrus sinensis flesh suppression subtractive hybridization (SSH) cDNA library Moro nucellare 58-8D-I cultivar Citrus sinensis cDNA clone Cl0004b7, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EG358228 ID=EG358228; Name=EG358228; organism=Citrus sinensis; type=EST; length=356bp
ACTTGAACTTAAATCCCAAATCTGTCAGCTTCTTAGAAGAGAAGAGCATA
TTTTTCATATTCTCATCAACATCTTCGAACTCTGTGGGCACATTGAATTC
GGGGTATTTTTCCCTGAGGAATTTTGCAAGCTCAAGAATGGTTGCCGGGT
GAGAAGAGCAAATGTAGCGGCCCTTCGCGTTAGGATGCTCAAACAAAAAT
ATATGAGCACTGCAGAGATCATCCAAATGCACAAATTGGCCTTGCTTTAT
AATTGGATAATGCGCTTCATTTCTTGTAATGGGCGAGAGTGCAGTTATGA
GACTGGGTGGCATTGACGACGTAAGGAATGGACCAACAACAAGACTTGGG
CCCGCG
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