EG358220
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EG358220 vs. ExPASy Swiss-Prot
Match: CRTB_SYNY3 (Phytoene synthase OS=Synechocystis sp. (strain PCC 6803) GN=crtB PE=3 SV=1) HSP 1 Score: 140.198 bits (352), Expect = 3.128e-33 Identity = 73/141 (51.77%), Postives = 98/141 (69.50%), Query Frame = 2 Query: 8 SRYKNFDELYLYCYYVAGTVGLMSVPVMGI-APDSQAT--TESVY---NAALALGIANQLTNILRDVGEDARRGRVYLPQDELAQAGLSDDDIFAGEVTIKWRNFMKNQIKRARMFFDMAENGVTELSEASRWPVWASLLL 412 SRY+ F+EL LYCY VAGTVGLMS V+G+ + QA ++VY A+ALG+ANQLTNILRDVGED RGR+YLP ++L + S+ D+ G +WR+ MK +I RAR +F+ AE G+ L+ +RWPVW +L+L Sbjct: 156 SRYQTFEELDLYCYRVAGTVGLMSSAVLGVDTGNGQAPWQPDAVYIPQEEAIALGVANQLTNILRDVGEDVERGRIYLPLEDLERFNYSEQDLLNGVNDDRWRSLMKFEIDRARHYFEDAERGIRALNRDARWPVWTALML 296
BLAST of EG358220 vs. ExPASy Swiss-Prot
Match: CRTB_THET2 (Phytoene synthase OS=Thermus thermophilus (strain HB27 / ATCC BAA-163 / DSM 7039) GN=crtB PE=3 SV=1) HSP 1 Score: 83.1889 bits (204), Expect = 4.538e-16 Identity = 49/104 (47.12%), Postives = 61/104 (58.65%), Query Frame = 2 Query: 29 ELYLYCYYVAGTVGLMSVPVMGIAPDSQATTESVYNAALALGIANQLTNILRDVGEDARRGRVYLPQDELAQAGLSDDDIFAGEVTIKWRNFMKNQIKRARMFF 340 EL YCY VAGTVG M P+ G +++A A+ LG A QLTNILRDVGED R RVYLP D L G+ +D+ AG VT +R M + +AR + Sbjct: 122 ELLRYCYQVAGTVGRMMAPIAGGGKEAEAR-------AVKLGQAMQLTNILRDVGEDLERDRVYLPLDLLRAHGVEVEDLRAGRVTPGYRALMAHLEGKARALY 218
BLAST of EG358220 vs. ExPASy Swiss-Prot
Match: CRTB_ESCVU (Phytoene synthase OS=Escherichia vulneris GN=crtB PE=3 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 1.907e-14 Identity = 46/129 (35.66%), Postives = 67/129 (51.94%), Query Frame = 2 Query: 8 SRYKNFDELYLYCYYVAGTVGLMSVPVMGIAPDSQATTESVYNAALALGIANQLTNILRDVGEDARRGRVYLPQDELAQAGLSDDDIFAGEVTIKWRNFMKNQIKRARMFFDMAENGVTELSEASRWPV 394 +RY F++ YCY+VAG VGLM VMG+ E V + A LG+A QLTNI RD+ +DA R YLP + L AGL+ ++ A E + I A ++ ++ G+ +L W + Sbjct: 123 TRYVTFEDTLRYCYHVAGVVGLMMARVMGVRD------ERVLDRACDLGLAFQLTNIARDIIDDAAIDRCYLPAEWLQDAGLTPENYAARENRAALARVAERLIDAAEPYYISSQAGLHDLPPRCAWAI 245
BLAST of EG358220 vs. ExPASy Swiss-Prot
Match: CRTB_PANAN (Phytoene synthase OS=Pantoea ananas GN=crtB PE=3 SV=2) HSP 1 Score: 77.411 bits (189), Expect = 2.490e-14 Identity = 44/131 (33.59%), Postives = 66/131 (50.38%), Query Frame = 2 Query: 2 RGSRYKNFDELYLYCYYVAGTVGLMSVPVMGIAPDSQATTESVYNAALALGIANQLTNILRDVGEDARRGRVYLPQDELAQAGLSDDDIFAGEVTIKWRNFMKNQIKRARMFFDMAENGVTELSEASRWPV 394 R ++Y D+ YCY+VAG VGLM +MG+ ++ + A LG+A QLTNI RD+ +DA GR YLP L GL+ ++ A E + ++ A ++ A G+ L S W + Sbjct: 121 REAQYSQLDDTLRYCYHVAGVVGLMMAQIMGVRDNA------TLDRACDLGLAFQLTNIARDIVDDAHAGRCYLPASWLEHEGLNKENYAAPENRQALSRIARRLVQEAEPYYLSATAGLAGLPLRSAWAI 245
BLAST of EG358220 vs. ExPASy Swiss-Prot
Match: CRTB_PARSN (Phytoene synthase OS=Paracoccus sp. (strain N81106 / MBIC 01143) GN=crtB PE=3 SV=2) HSP 1 Score: 74.3294 bits (181), Expect = 2.108e-13 Identity = 50/132 (37.88%), Postives = 70/132 (53.03%), Query Frame = 2 Query: 14 YKNFDELYLYCYYVAGTVGLMSVPVMGIAPDSQATTESVYNAALALGIANQLTNILRDVGEDARRGRVYLPQDELAQAGLSDDDIFAGEV-TIKWRNFMKNQIKRARMFFDMAENGVTELSEASRWPVWASL 406 Y+ D++ Y Y+VAG VG+M VMG+ D V + A LG+A QLTNI RDV +DAR GR YLP D L QAG D G V + + + + A +++ A G+ +L W + A+L Sbjct: 121 YRTLDDVLEYSYHVAGIVGVMMARVMGVRDDP------VLDRACDLGLAFQLTNIARDVIDDARIGRCYLPGDWLDQAGARVD----GPVPSPELYTVILRLLDAAELYYASARVGLADLPPRCAWSIAAAL 242
BLAST of EG358220 vs. ExPASy Swiss-Prot
Match: CRTM_STAHJ (Dehydrosqualene synthase OS=Staphylococcus haemolyticus (strain JCSC1435) GN=crtM PE=3 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 8.857e-12 Identity = 43/116 (37.07%), Postives = 62/116 (53.45%), Query Frame = 2 Query: 41 YCYYVAGTVGLMSVPVMGIAPDSQATTESVYNAALALGIANQLTNILRDVGEDARRGRVYLPQDELAQAGLS-DDDIFAGEVTIKWRNFMKNQIKRARMFFDMAENGVTELSEASR 385 YCY VAGTVG++ +P++ P +A Y LG A QLTNILRDVGED R GR+Y + L + +S D+I +++ + + A +DM N + +E SR Sbjct: 127 YCYGVAGTVGVLLIPILATPPSDEA-----YEYGKQLGEALQLTNILRDVGEDYRNGRIYFSKARLNEFNVSIADEIERDQLSDNYIKIWEFYATLADNNYDMVLNHLDVYNEESR 237
BLAST of EG358220 vs. ExPASy Swiss-Prot
Match: CRTB_MYCTU (Probable phytoene synthase OS=Mycobacterium tuberculosis GN=crtB PE=3 SV=1) HSP 1 Score: 67.0106 bits (162), Expect = 3.366e-11 Identity = 39/79 (49.37%), Postives = 51/79 (64.56%), Query Frame = 2 Query: 17 KNFDELYLYCYYVAGTVGLMSVPVMGIAPDSQATTESVYNAALALGIANQLTNILRDVGEDARRGRVYLPQDELAQAGL 253 ++FDEL +YC AGT+G + + + G P S AT+ A LGIA Q TNILRDV ED GR+YLP+DEL + G+ Sbjct: 116 RDFDELIVYCRRGAGTIGKLCLSIFG--PVSTATSRY----AEQLGIALQQTNILRDVREDFLNGRIYLPRDELDRLGV 188
BLAST of EG358220 vs. ExPASy Swiss-Prot
Match: CRTB_MYCBO (Probable phytoene synthase OS=Mycobacterium bovis GN=crtB PE=3 SV=1) HSP 1 Score: 67.0106 bits (162), Expect = 3.366e-11 Identity = 39/79 (49.37%), Postives = 51/79 (64.56%), Query Frame = 2 Query: 17 KNFDELYLYCYYVAGTVGLMSVPVMGIAPDSQATTESVYNAALALGIANQLTNILRDVGEDARRGRVYLPQDELAQAGL 253 ++FDEL +YC AGT+G + + + G P S AT+ A LGIA Q TNILRDV ED GR+YLP+DEL + G+ Sbjct: 116 RDFDELIVYCRRGAGTIGKLCLSIFG--PVSTATSRY----AEQLGIALQQTNILRDVREDFLNGRIYLPRDELDRLGV 188
BLAST of EG358220 vs. ExPASy Swiss-Prot
Match: CRTB_STRGR (Phytoene synthase OS=Streptomyces griseus GN=crtB PE=3 SV=1) HSP 1 Score: 65.4698 bits (158), Expect = 9.792e-11 Identity = 39/83 (46.99%), Postives = 51/83 (61.45%), Query Frame = 2 Query: 14 YKNFDELYLYCYYVAGTVGLMSVPVMGIAPDSQATTESVYNAALALGIANQLTNILRDVGEDARRGRVYLPQDELAQAGLSDD 262 Y +++EL Y + A +GL +PV+G A E+ +AA ALG+A QLTN LRDVGED RGR+YLP + LA G D Sbjct: 133 YASYEELGRYMHGSAAVIGLQMLPVLGTVV---AREEAAPHAA-ALGVAFQLTNFLRDVGEDLDRGRLYLPTELLAAHGADRD 211 The following BLAST results are available for this feature:
BLAST of EG358220 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 19
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Sequences
The
following sequences are available for this feature:
EST sequence >EG358220 ID=EG358220; Name=EG358220; organism=Citrus sinensis; type=EST; length=412bpback to top |