FC921980

Overview
NameFC921980
Unique NameFC921980
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length578
Libraries
Library NameType
RindPdigScdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC921980 vs. ExPASy Swiss-Prot
Match: S26A1_MOUSE (Sulfate anion transporter 1 OS=Mus musculus GN=Slc26a1 PE=2 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 4.402e-11
Identity = 31/105 (29.52%), Postives = 58/105 (55.24%), Query Frame = 2
Query:   95 VIAMAEPVAVGRSFAMFKNYHIDGNKEMIAFGMMNIAGSCTSCYLTTGPFSRSAVNFNAGCKTAVSNIVMSMAVMVTLLFLTPLFHYTPLVVLSAIIMAAMLGLI 409
            ++  A  +++   FA    Y +  N+E++A G  N+  +   C+ T+   S++ V    GC+T +S++V +  V++ LL L PLFH     VL+ II+ ++ G +
Sbjct:  355 LVGSAFSISLAEMFARSHGYSVSANQELLAVGCCNVLPAFFHCFATSAALSKTLVKIATGCQTQLSSVVSAAVVLLVLLVLAPLFHDLQRCVLACIIVVSLRGAL 459          
BLAST of FC921980 vs. ExPASy Swiss-Prot
Match: S26A1_HUMAN (Sulfate anion transporter 1 OS=Homo sapiens GN=SLC26A1 PE=2 SV=2)

HSP 1 Score: 67.781 bits (164), Expect = 4.402e-11
Identity = 31/109 (28.44%), Postives = 60/109 (55.05%), Query Frame = 2
Query:   83 IITGVIAMAEPVAVGRSFAMFKNYHIDGNKEMIAFGMMNIAGSCTSCYLTTGPFSRSAVNFNAGCKTAVSNIVMSMAVMVTLLFLTPLFHYTPLVVLSAIIMAAMLGLI 409
            +   ++A A  +++   FA    Y +  N+E++A G  N+  +   C+ T+   ++S V    GC+T +S++V +  V++ LL L PLFH     VL+ +I+ ++ G +
Sbjct:  346 VALALVAAAFSISLAEMFARSHGYSVRANQELLAVGCCNVLPAFLHCFATSAALAKSLVKTATGCRTQLSSVVSATVVLLVLLALAPLFHDLQRSVLACVIVVSLRGAL 454          
BLAST of FC921980 vs. ExPASy Swiss-Prot
Match: S26A2_MOUSE (Sulfate transporter OS=Mus musculus GN=Slc26a2 PE=1 SV=1)

HSP 1 Score: 67.0106 bits (162), Expect = 7.508e-11
Identity = 45/177 (25.42%), Postives = 81/177 (45.76%), Query Frame = 2
Query:   11 GLNPPSFSDLVFVSPYLTTAIKTGIITGVIAMAEPVAVGRSFAMFKNYHIDGNKEMIAFGMMNIAGSCTSCYLTTGPFSRSAVNFNAGCKTAVSNIVMSMAVMVTLLFLTPLFHYTPLVVLSAIIMAAMLG-LIDYEAVIHLFKVDKFYFIECVVAHIGVGFVSIQIVLDIAISISV 538
            G  PP   D   +      AI   II      A  V++   FA    Y +  N+EM A G  NI  S   C  T+   +++ V  + GC+T +S IV ++ +++ LL + PLF+     VL  I +  + G L+ +  +  ++++ +   +   V  +    +S +I L + +  S+
Sbjct:  367 GFMPPKAPDWSLIPNVAVDAIAISII----GFAITVSLSEMFAKKHGYTVKANQEMYAIGFCNIIPSFFHCITTSAALAKTLVKESTGCQTQLSAIVTALVLLLVLLVIAPLFYSLQKCVLGVITIVNLRGALLKFRDLPKMWRLSRMDTVIWFVTMLSSALLSTEIGLLVGVCFSM 539          
BLAST of FC921980 vs. ExPASy Swiss-Prot
Match: S26A2_BOVIN (Sulfate transporter OS=Bos taurus GN=SLC26A2 PE=3 SV=1)

HSP 1 Score: 66.6254 bits (161), Expect = 9.806e-11
Identity = 44/177 (24.86%), Postives = 80/177 (45.20%), Query Frame = 2
Query:   11 GLNPPSFSDLVFVSPYLTTAIKTGIITGVIAMAEPVAVGRSFAMFKNYHIDGNKEMIAFGMMNIAGSCTSCYLTTGPFSRSAVNFNAGCKTAVSNIVMSMAVMVTLLFLTPLFHYTPLVVLSAIIMAAMLG-LIDYEAVIHLFKVDKFYFIECVVAHIGVGFVSIQIVLDIAISISV 538
            G  PP   D   +      AI   II      A  V++   FA    Y +  N+EM A G  NI  S   C+ T+   +++ V  + GC+T VS ++ ++ +++ LL + PLF      VL  I +  + G L  ++ +  ++++ +   +   V  +    +S +I L   +  S+
Sbjct:  362 GFMPPKAPDWNLIPRVAVDAIAIAII----GFAITVSLSEMFAKKHGYTVKANQEMYAIGFCNIIPSFFHCFTTSAALAKTLVKESTGCQTQVSGVMTALVLLLVLLVIAPLFFSLQKSVLGVITIVNLRGALCKFKDLPQMWRISRMDTVIWFVTMLSSALISTEIGLLTGVCFSM 534          
The following BLAST results are available for this feature:
BLAST of FC921980 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 34
Match NameE-valueIdentityDescription
S26A1_MOUSE4.402e-1129.52Sulfate anion transporter 1 OS=Mus musculus GN=Slc... [more]
S26A1_HUMAN4.402e-1128.44Sulfate anion transporter 1 OS=Homo sapiens GN=SLC... [more]
S26A2_MOUSE7.508e-1125.42Sulfate transporter OS=Mus musculus GN=Slc26a2 PE=... [more]
S26A2_BOVIN9.806e-1124.86Sulfate transporter OS=Bos taurus GN=SLC26A2 PE=3 ... [more]

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Properties
Property NameValue
Genbank descriptionC06056B10T7 RindPdigS Citrus sinensis cDNA clone C06056B10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC921980 ID=FC921980; Name=FC921980; organism=Citrus sinensis; type=EST; length=578bp
CTTGAAGAAGGGATTGAATCCACCTTCATTTTCGGATTTGGTGTTCGTGT
CACCTTATCTCACAACAGCTATCAAAACTGGCATCATCACTGGCGTCATT
GCTATGGCTGAACCGGTAGCTGTAGGAAGAAGCTTTGCCATGTTCAAGAA
TTATCATATTGATGGGAACAAAGAGATGATAGCTTTCGGGATGATGAACA
TAGCTGGTTCTTGCACTTCTTGCTATCTCACAACAGGGCCGTTTTCGCGG
TCAGCTGTGAACTTCAATGCAGGATGCAAGACAGCAGTGTCGAACATTGT
TATGTCAATGGCAGTGATGGTCACATTGCTTTTCTTAACACCATTGTTCC
ATTACACTCCCCTTGTGGTTTTATCCGCAATCATAATGGCTGCGATGCTC
GGTCTCATTGACTACGAAGCAGTCATCCATCTATTTAAAGTTGACAAATT
TTATTTCATAGAGTGCGTTGTGGCACACATTGGCGTGGGCTTTGTCAGCA
TCCAAATTGTGTTAGACATTGCGATATCAATTTCTGTGCGCAGAGGACAT
CTGCCGCGACAACACTATATAAATTTTG
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