EG358219

Overview
NameEG358219
Unique NameEG358219
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length789
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EG358219 vs. ExPASy Swiss-Prot
Match: CHSB_IPOCO (Chalcone synthase B (Fragment) OS=Ipomoea cordatotriloba GN=CHSB PE=3 SV=1)

HSP 1 Score: 164.466 bits (415), Expect = 6.167e-40
Identity = 77/121 (63.64%), Postives = 97/121 (80.17%), Query Frame = 3
Query:    9 MFELVSTAQTILPDSDGSIDGHLREVGLTFHLLKDVPGLISKNIQKSLTEAFKPLGISDWNSIFWIAHPGGPTILDQVEEKLGLKPEKLRATRHVLSEYGNMPSACVLFILDEMRKKSAED 371
            +FEL+S AQTI+P++D  +  H+RE+GLTFH  K VP  I++N++  L +AF+P GISDWNSIFW+ HPGG  I+D VEE LGL PEKLRA+R VLS YGN+ SACVLFILDE+RKKS +D
Sbjct:  242 LFELISAAQTIIPNTDSHLKLHVREMGLTFHCSKAVPTFITQNVEDCLVKAFEPYGISDWNSIFWVLHPGGNAIVDGVEETLGLAPEKLRASRDVLSGYGNLTSACVLFILDEVRKKSKKD 362          
BLAST of EG358219 vs. ExPASy Swiss-Prot
Match: CHSB_IPOTR (Chalcone synthase B (Fragment) OS=Ipomoea triloba GN=CHSB PE=3 SV=1)

HSP 1 Score: 154.836 bits (390), Expect = 4.887e-37
Identity = 71/121 (58.68%), Postives = 98/121 (80.99%), Query Frame = 3
Query:    9 MFELVSTAQTILPDSDGSIDGHLREVGLTFHLLKDVPGLISKNIQKSLTEAFKPLGISDWNSIFWIAHPGGPTILDQVEEKLGLKPEKLRATRHVLSEYGNMPSACVLFILDEMRKKSAED 371
            +FELVS+AQTI+P++D  +   LRE+GLTFH  + VP ++++N++  L +AF+P GISDWNSIFW+ HPGG  I+D+VEE+LGL  ++ RA+R VLSEYGN+ SACVLFILDE+R KS ++
Sbjct:  244 LFELVSSAQTIVPNTDSHLKLTLREMGLTFHCSRAVPSVLAENVEDCLVKAFEPYGISDWNSIFWVFHPGGNAIVDRVEERLGLGAQRFRASRDVLSEYGNLTSACVLFILDEVRNKSKKN 364          
BLAST of EG358219 vs. ExPASy Swiss-Prot
Match: CHSC_IPOPU (Chalcone synthase C (Fragment) OS=Ipomoea purpurea GN=CHSC PE=3 SV=1)

HSP 1 Score: 154.451 bits (389), Expect = 6.382e-37
Identity = 74/109 (67.89%), Postives = 88/109 (80.73%), Query Frame = 3
Query:    9 MFELVSTAQTILPDSDGSIDGHLREVGLTFHLLKDVPGLISKNIQKSLTEAFKPLGISDWNSIFWIAHPGGPTILDQVEEKLGLKPEKLRATRHVLSEYGNMPSACVLF 335
            +FELVS AQT +PD+D  +   LRE+GLTFH  K VP LI++NI+  L +AF+P GISDWNSIFWI HPGG  ILD VEEKLGL+PEKLRA+R VLS+YGN+ SACVLF
Sbjct:  242 LFELVSAAQTTIPDTDSYLKLQLREMGLTFHCSKAVPSLITQNIEDCLVKAFEPFGISDWNSIFWILHPGGNAILDGVEEKLGLEPEKLRASRDVLSQYGNLTSACVLF 350          
BLAST of EG358219 vs. ExPASy Swiss-Prot
Match: CHSA_IPONI (Chalcone synthase A (Fragment) OS=Ipomoea nil GN=CHSA PE=3 SV=1)

HSP 1 Score: 150.214 bits (378), Expect = 1.204e-35
Identity = 71/106 (66.98%), Postives = 86/106 (81.13%), Query Frame = 3
Query:    9 MFELVSTAQTILPDSDGSIDGHLREVGLTFHLLKDVPGLISKNIQKSLTEAFKPLGISDWNSIFWIAHPGGPTILDQVEEKLGLKPEKLRATRHVLSEYGNMPSAC 326
            +FELVS AQT +PD+D  +  HLRE+GLTFH  K VP LI++N++  L +AF+P GISDWNSIFWI HPGG  ILD+VEEKLGL+PEKLRA+R VLSE GN+ SAC
Sbjct:  239 LFELVSAAQTTIPDTDSHLKLHLREMGLTFHCSKAVPSLITQNVEDYLVKAFEPFGISDWNSIFWILHPGGIAILDRVEEKLGLEPEKLRASRDVLSESGNLTSAC 344          
BLAST of EG358219 vs. ExPASy Swiss-Prot
Match: CHS4_TRISU (Chalcone synthase 4 (Fragment) OS=Trifolium subterraneum GN=CHS4 PE=2 SV=1)

HSP 1 Score: 134.035 bits (336), Expect = 8.926e-31
Identity = 61/76 (80.26%), Postives = 70/76 (92.11%), Query Frame = 3
Query:    9 MFELVSTAQTILPDSDGSIDGHLREVGLTFHLLKDVPGLISKNIQKSLTEAFKPLGISDWNSIFWIAHPGGPTILD 236
            +FE+V TAQTI PDS+G+IDGHLRE GLTFHLLKDVPG++SKNI K+L EAF+PLGISD+NSIFWIAHPGGP ILD
Sbjct:  236 IFEMVWTAQTIAPDSEGAIDGHLREAGLTFHLLKDVPGIVSKNIDKALVEAFQPLGISDYNSIFWIAHPGGPAILD 311          
BLAST of EG358219 vs. ExPASy Swiss-Prot
Match: PKS37_DICDI (Probable polyketide synthase 37 OS=Dictyostelium discoideum GN=stlB PE=2 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 6.427e-13
Identity = 39/146 (26.71%), Postives = 73/146 (50.00%), Query Frame = 3
Query:   15 ELVSTAQTILPDSDGSIDGHLREVGLTFHLLKDVPGLISKNIQKSLTEAFKPLGISDWNSIFWIAHPGGPTILDQVEEKLGLKPEKLRATRHVLSEYGNMPSACVLFILDEMRKKSAEDGLETAGEGLEWGVLFGFGPGLTVETVV 452
            E++     ++PDS  +++  +   G+   L  ++P  I+++I  ++T   K   +   +  F+  HPGG  I+  V E LGL PE L  +  V+  YGNM      ++L  +  K+ +  L+    G  +G+   F PG ++E ++
Sbjct: 2819 EIIDDLSYLMPDSRDALNLFIGPTGIDLDLRPELPIAINRHINSAITSWLKKNSLQKSDIEFFATHPGGAKIISAVHEGLGLSPEDLSDSYEVMKRYGNMIGVSTYYVLRRILDKN-QTLLQEGSLGYNYGMAMAFSPGASIEAIL 2963          
The following BLAST results are available for this feature:
BLAST of EG358219 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 146
Match NameE-valueIdentityDescription
CHSB_IPOCO6.167e-4063.64Chalcone synthase B (Fragment) OS=Ipomoea cordatot... [more]
CHSB_IPOTR4.887e-3758.68Chalcone synthase B (Fragment) OS=Ipomoea triloba ... [more]
CHSC_IPOPU6.382e-3767.89Chalcone synthase C (Fragment) OS=Ipomoea purpurea... [more]
CHSA_IPONI1.204e-3566.98Chalcone synthase A (Fragment) OS=Ipomoea nil GN=C... [more]
CHS4_TRISU8.926e-3180.26Chalcone synthase 4 (Fragment) OS=Trifolium subter... [more]
PKS37_DICDI6.427e-1326.71Probable polyketide synthase 37 OS=Dictyostelium d... [more]

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Properties
Property NameValue
Genbank description1c5 Citrus sinensis flesh suppression subtractive hybridization (SSH) cDNA library Moro nucellare 58-8D-I cultivar Citrus sinensis cDNA clone Cl0001c5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EG358219 ID=EG358219; Name=EG358219; organism=Citrus sinensis; type=EST; length=789bp
ACGCGGTCATGTTTGAACTCGTCTCTACAGCCCAAACAATATTGCCCGAT
AGCGATGGATCTATCGACGGGCATCTCCGTGAAGTTGGCCTTACCTTTCA
CCTCCTCAAGGATGTTCCCGGGCTTATTTCAAAGAACATCCAGAAAAGCC
TAACCGAGGCATTCAAACCATTGGGTATCTCGGACTGGAACTCGATTTTC
TGGATCGCGCACCCTGGTGGGCCTACGATTCTGGACCAAGTCGAGGAGAA
GTTGGGCCTGAAGCCCGAAAAGCTGCGGGCCACGAGGCACGTGCTTTCGG
AGTATGGCAACATGCCGAGTGCTTGTGTGTTGTTTATTTTGGACGAGATG
AGGAAGAAATCAGCTGAAGATGGCTTAGAGACCGCAGGAGAAGGGCTTGA
GTGGGGAGTCCTTTTTGGGTTTGGGCCTGGGCTCACTGTTGAGACCGTGG
TCCTCCACAGTGTTGCCGCTGCTTAAGGTTAAAAAGCAGCTGTTGGTATC
GTTGATTTGATTCACTTTTCCCTCCGGCTTTGTTTATTTTTCACTGTTAT
TGGGTCTTTATTTTTCTTTTCTAAAAGAAAGTGTGTCGGGGAAGTAATTA
TGTTGTGCAATGCATATGCTTGATTTCAGACTTTTTAGATTTGTAGACTG
TAATCATAAAATCTGCAGATTCATGTTTCGGGTTTGTGTTATGAAAAAAT
AATGATTAGTTTCATGAATGATTTATGAAATTCTTAAATCTTTTTTTCGA
AGGAAAAAACAGAAAGAAGGTACTCGGGCGCGACACGCT
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