CX047715

Overview
NameCX047715
Unique NameCX047715
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length874
Libraries
Library NameType
Ruby Orange Developing Seed cDNA Library UCRCS09cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX047715 vs. ExPASy Swiss-Prot
Match: GLUB1_ORYSJ (Glutelin type-B 1 OS=Oryza sativa subsp. japonica GN=GluB1-A PE=2 SV=3)

HSP 1 Score: 203.371 bits (516), Expect = 1.420e-51
Identity = 105/231 (45.45%), Postives = 152/231 (65.80%), Query Frame = -1
Query:  209 QRGIIIRVEEELRVLSPQ----------RDRXXXXXXXXETPSYERDNGFEETICTMKLRHNIDKPSHADVYNPRAGRVTTVNRFNLPILRDLQLSAEKGNLYPNALLAPQWNLNAHSIVYVTRGNGRMQIVAENGENVFDGQIREGQLIVVPQGFAVVKRAGNRGLEWISFKTNDVAMTSQLAGRASVLRGLPLDVIQNSFQVSRDEAQRLKYNR-QELTVFTPGPRSQW 868
            QRG II V+  L++L P           +D+           +  R NG EE  CT+K+R NI+ PS AD YNPRAGR+T+VN    PIL  +Q+SA + NLY NA+L+P WN+NAHS+VY+ +G  R+Q+V+  G+ VFDG +R GQL+++PQ +AV+K+A   G ++I+ KTN  A  S LAG+ SV R LP+DV+ N++++SR++A+ LK NR +E   FTP  + Q+
Sbjct:  255 QRGEIIHVKNGLQLLKPTLTQQQEQAQAQDQYQQVQYSERQQTSSRWNGLEENFCTIKVRVNIENPSRADSYNPRAGRITSVNSQKFPILNLIQMSATRVNLYQNAILSPFWNVNAHSLVYMIQGRSRVQVVSNFGKTVFDGVLRPGQLLIIPQHYAVLKKAEREGCQYIAIKTNANAFVSHLAGKNSVFRALPVDVVANAYRISREQARSLKNNRGEEHGAFTPRFQQQY 485          
BLAST of CX047715 vs. ExPASy Swiss-Prot
Match: CRU2_BRANA (Cruciferin BnC2 OS=Brassica napus GN=BnC2 PE=3 SV=2)

HSP 1 Score: 197.978 bits (502), Expect = 5.967e-50
Identity = 100/221 (45.25%), Postives = 147/221 (66.52%), Query Frame = -1
Query:  215 QIQRGIIIRVEEELRVLSPQRDRXXXXXXXXETPSYERDNGFEETICTMKLRHNIDKPSHADVYNPRAGRVTTVNRFNLPILRDLQLSAEKGNLYPNALLAPQWNLNAHSIVYVTRGNGRMQIVAENGENVFDGQIREGQLIVVPQGFAVVKRAGNRGLEWISFKTNDVAMTSQLAGRASVLRGLPLDVIQNSFQVSRDEAQRLKYNRQELTV-FTPGPRS 874
            Q  RG I+RV+    V+ P            + P     NG EETIC+ +   N+D PS+ADVY P+ G ++ +N ++LPILR L+LSA +G++  NA++ PQW   +++++YVT G  ++Q+V +NG+ VFDGQ+ +GQL+ +PQGF+VVKRA +    WI FKTN  A  + LAGR SV+RGLPL+VI N +Q+S +EA+R+K+N  E T+  + GP S
Sbjct:  275 QDNRGNIVRVQGPFGVIRPP--------LKSQRPQETEANGLEETICSARCTDNLDDPSNADVYKPQLGYISILNSYDLPILRVLRLSALRGSIRQNAMVLPQWKSKSNAVLYVTDGEAQIQVVNDNGDRVFDGQVSQGQLLSIPQGFSVVKRATSDQFRWIEFKTNANAQINTLAGRTSVMRGLPLEVIANGYQISLEEARRVKFNTIETTLTHSSGPAS 487          
BLAST of CX047715 vs. ExPASy Swiss-Prot
Match: GLUB2_ORYSJ (Glutelin type-B 2 OS=Oryza sativa subsp. japonica GN=GLUB2 PE=2 SV=2)

HSP 1 Score: 197.593 bits (501), Expect = 7.793e-50
Identity = 101/229 (44.10%), Postives = 151/229 (65.94%), Query Frame = -1
Query:  209 QRGIIIRVEEELRVLSPQ--------RDRXXXXXXXXETPSYERDNGFEETICTMKLRHNIDKPSHADVYNPRAGRVTTVNRFNLPILRDLQLSAEKGNLYPNALLAPQWNLNAHSIVYVTRGNGRMQIVAENGENVFDGQIREGQLIVVPQGFAVVKRAGNRGLEWISFKTNDVAMTSQLAGRASVLRGLPLDVIQNSFQVSRDEAQRLKYNR-QELTVFTPGPRSQW 868
            QRG I+ V+  L++L P         + +        +  +  R NG EE  CT+K R NI+ PS AD YNPRAGR+++VN    PIL  +Q+SA + NLY NA+L+P WN+NAHS+VY+ +G  R+Q+V+  G+ VFDG +R GQL+++PQ +AV+K+A   G ++I+ KTN  A  S LAG+ SV R LP+DV+ N++++SR++A+ +K NR +E   FTP  + Q+
Sbjct:  253 QRGEIVHVKNGLQLLKPTLTQQQEQAQAQYQEVQYSEQQQTSSRWNGLEENFCTIKARVNIENPSRADSYNPRAGRISSVNSQKFPILNLIQMSATRVNLYQNAILSPFWNVNAHSLVYMIQGQSRVQVVSNFGKTVFDGVLRPGQLLIIPQHYAVLKKAEREGCQYIAIKTNANAFVSHLAGKNSVFRALPVDVVANAYRISREQARSIKNNRGEEHGAFTPRFQQQY 481          
BLAST of CX047715 vs. ExPASy Swiss-Prot
Match: SSG2_AVESA (12S seed storage globulin 2 OS=Avena sativa PE=3 SV=1)

HSP 1 Score: 195.667 bits (496), Expect = 2.961e-49
Identity = 100/247 (40.49%), Postives = 149/247 (60.32%), Query Frame = -1
Query:  227 QRGIIIRVEEELRVLSP-----------------QRDRXXXXXXXXETPSYERD---------------NGFEETICTMKLRHNIDKPSHADVYNPRAGRVTTVNRFNLPILRDLQLSAEKGNLYPNALLAPQWNLNAHSIVYVTRGNGRMQIVAENGENVFDGQIREGQLIVVPQGFAVVKRAGNRGLEWISFKTNDVAMTSQLAGRASVLRGLPLDVIQNSFQVSRDEAQRLKYNR-QELTVFTP 868
            QRG IIRV + L+ L P                  ++         ++P Y+                 NG EE  C+++ R NI+ P  AD YNPRAGR+T +N  N P L  +Q+SA + NLY NA+L+P WN+NAHS++++ +G  R+Q+V  +G+ VF+  +R GQL+++PQ + V+K+A   G ++ISFKTN  +M SQ+AG+ S+LR LP+DV+ N++++SR EAQ LK NR +E   FTP
Sbjct:  248 QRGEIIRVSQGLQFLKPFVSQQGPVEHQAYQPIQSQEEQSTQYQVGQSPQYQEGQSTQYQPGQSWDQSFNGLEENFCSLEARQNIENPKRADTYNPRAGRITHLNSKNFPTLNLVQMSATRVNLYQNAILSPYWNINAHSVMHMIQGRARVQVVNNHGQTVFNDILRRGQLLIIPQHYVVLKKAEREGCQYISFKTNPNSMVSQIAGKTSILRALPVDVLANAYRISRQEAQNLKNNRGEEFDAFTP 494          
BLAST of CX047715 vs. ExPASy Swiss-Prot
Match: 11S2_SESIN (11S globulin seed storage protein 2 OS=Sesamum indicum PE=2 SV=1)

HSP 1 Score: 194.512 bits (493), Expect = 6.597e-49
Identity = 95/218 (43.58%), Postives = 140/218 (64.22%), Query Frame = -1
Query:  218 QRGIIIRVEEELRVLSPQRDRXXXXXXXXETPSYERDNGFEETICTMKLRHNIDKPSHADVYNPRAGRVTTVNRFNLPILRDLQLSAEKGNLYPNALLAPQWNLNAHSIVYVTRGNGRMQIVAENGENVFDGQIREGQLIVVPQGFAVVKRAGNRGLEWISFKTNDVAMTSQLAGRASVLRGLPLDVIQNSFQVSRDEAQRLKYNR-QELTVFTPGPR 868
            +RG+I+   E +  + P  +              + DNG EET CTMK R N++    AD+++ +AGRV  V+R  LPIL+ + LSAEKGNLY NAL++P W++  H+IVYVTRG+ ++Q+V  NG+ + + ++ +G++ VVPQ +    RAGN G EW++FKT    M S LAG  SV+R +PL VI NS+Q+S ++AQ LK NR  +  + +PG R
Sbjct:  245 ERGLIVMARERMTFVRPDEEEGEQEHRGR-----QLDNGLEETFCTMKFRTNVESRREADIFSRQAGRVHVVDRNKLPILKYMDLSAEKGNLYSNALVSPDWSMTGHTIVYVTRGDAQVQVVDHNGQALMNDRVNQGEMFVVPQYYTSTARAGNNGFEWVAFKTTGSPMRSPLAGYTSVIRAMPLQVITNSYQISPNQAQALKMNRGSQSFLLSPGGR 457          
BLAST of CX047715 vs. ExPASy Swiss-Prot
Match: SSG1_AVESA (12S seed storage globulin 1 OS=Avena sativa PE=2 SV=1)

HSP 1 Score: 189.119 bits (479), Expect = 2.772e-47
Identity = 85/178 (47.75%), Postives = 128/178 (71.91%), Query Frame = -1
Query:  227 NGFEETICTMKLRHNIDKPSHADVYNPRAGRVTTVNRFNLPILRDLQLSAEKGNLYPNALLAPQWNLNAHSIVYVTRGNGRMQIVAENGENVFDGQIREGQLIVVPQGFAVVKRAGNRGLEWISFKTNDVAMTSQLAGRASVLRGLPLDVIQNSFQVSRDEAQRLKYNR-QELTVFTP 757
            NG EE  C+++ R NI+ P  AD YNPRAGR+T +N  N P L  +Q+SA + NLY NA+L+P WN+NAHS++++ +G  R+Q+V  +G+ VF+  +R GQL+++PQ + V+K+A   G ++ISFKT   +M S +AG+ S+LR LP+DV+ N++++SR E+Q LK NR +E   FTP
Sbjct:  317 NGLEENFCSLEARQNIENPKRADTYNPRAGRITHLNSKNFPTLNLVQMSATRVNLYQNAILSPYWNINAHSVMHMIQGRARVQVVNNHGQTVFNDILRRGQLLIIPQHYVVLKKAEREGCQYISFKTTPNSMVSYIAGKTSILRALPVDVLANAYRISRQESQNLKNNRGEEFGAFTP 494          
BLAST of CX047715 vs. ExPASy Swiss-Prot
Match: LEGB7_VICFA (Legumin type B (Fragment) OS=Vicia faba GN=LEB7 PE=3 SV=1)

HSP 1 Score: 181.03 bits (458), Expect = 7.548e-45
Identity = 98/221 (44.34%), Postives = 139/221 (62.90%), Query Frame = -1
Query:  212 QRGIIIRVEEELRVLSPQRDRXXXXXXXXETPSYERD-NGFEETICTMKLRHNIDKPSHADVYNPRAGRVTTVNRFNLPILRDLQLSAEKGNLYPNALLAPQWNLNAHSIVYVTRGNGRMQIVAENGENVFDGQIREGQLIVVPQGFAVVKRAG-NRGLEWISFKTNDVAMTSQLAGRASVLRGLPLDVIQNSFQVSRDEAQRLKYNRQELTVFTPGPRSQ 868
            +R  I+RVE  LR+++P+  +        E    E+  NG EETIC++K+R NI +P+ AD+YNPRAG ++T N   LPILR L+LSAE   LY N + AP WN+NA+S++YV RG GR++IV   G  VFD ++R+GQL+VVPQ F V ++AG   GLE++ FKTND A  S +     V R  P DV+ N+F + + +   LK +     +  P  +SQ
Sbjct:  116 KRNQIVRVEGGLRIINPEGQQEEEEQEEEEKQRSEQGRNGLEETICSLKIRENIAQPARADLYNPRAGSISTANSLTLPILRYLRLSAEYVRLYRNGIYAPHWNINANSLLYVIRGEGRVRIVNSQGNAVFDNKVRKGQLVVVPQNFVVAEQAGEEEGLEYLVFKTNDRAAVSHV---QQVFRATPADVLANAFGLRQRQVTELKLSGNRGPLVHPHSQSQ 333          
BLAST of CX047715 vs. ExPASy Swiss-Prot
Match: LEGB6_VICFA (Legumin type B (Fragment) OS=Vicia faba GN=LEB6 PE=3 SV=1)

HSP 1 Score: 181.03 bits (458), Expect = 7.548e-45
Identity = 98/221 (44.34%), Postives = 139/221 (62.90%), Query Frame = -1
Query:  212 QRGIIIRVEEELRVLSPQRDRXXXXXXXXETPSYERD-NGFEETICTMKLRHNIDKPSHADVYNPRAGRVTTVNRFNLPILRDLQLSAEKGNLYPNALLAPQWNLNAHSIVYVTRGNGRMQIVAENGENVFDGQIREGQLIVVPQGFAVVKRAG-NRGLEWISFKTNDVAMTSQLAGRASVLRGLPLDVIQNSFQVSRDEAQRLKYNRQELTVFTPGPRSQ 868
            +R  I+RVE  LR+++P+  +        E    E+  NG EETIC++K+R NI +P+ AD+YNPRAG ++T N   LPILR L+LSAE   LY N + AP WN+NA+S++YV RG GR++IV   G  VFD ++R+GQL+VVPQ F V ++AG   GLE++ FKTND A  S +     V R  P DV+ N+F + + +   LK +     +  P  +SQ
Sbjct:  110 KRNQIVRVEGGLRIINPEGQQEEEEEEEEEKQRSEQGRNGLEETICSLKIRENIAQPARADLYNPRAGSISTANSLTLPILRYLRLSAEYVRLYRNGIYAPHWNINANSLLYVIRGEGRVRIVNSQGNAVFDNKVRKGQLVVVPQNFVVAEQAGEEEGLEYLVFKTNDRAAVSHV---QQVFRATPADVLANAFGLRQRQVTELKLSGNRGPLVHPQSQSQ 327          
BLAST of CX047715 vs. ExPASy Swiss-Prot
Match: LEGB2_VICFA (Legumin type B (Fragment) OS=Vicia faba GN=LEB2 PE=3 SV=1)

HSP 1 Score: 181.03 bits (458), Expect = 7.548e-45
Identity = 98/221 (44.34%), Postives = 139/221 (62.90%), Query Frame = -1
Query:  212 QRGIIIRVEEELRVLSPQRDRXXXXXXXXETPSYERD-NGFEETICTMKLRHNIDKPSHADVYNPRAGRVTTVNRFNLPILRDLQLSAEKGNLYPNALLAPQWNLNAHSIVYVTRGNGRMQIVAENGENVFDGQIREGQLIVVPQGFAVVKRAG-NRGLEWISFKTNDVAMTSQLAGRASVLRGLPLDVIQNSFQVSRDEAQRLKYNRQELTVFTPGPRSQ 868
            +R  I+RVE  LR+++P+  +        E    E+  NG EETIC++K+R NI +P+ AD+YNPRAG ++T N   LPILR L+LSAE   LY N + AP WN+NA+S++YV RG GR++IV   G  VFD ++R+GQL+VVPQ F V ++AG   GLE++ FKTND A  S +     V R  P DV+ N+F + + +   LK +     +  P  +SQ
Sbjct:  116 KRNQIVRVEGGLRIINPEGQQEEEEEEEEEKQRSEQGRNGLEETICSLKIRENIAQPARADLYNPRAGSISTANSLTLPILRYLRLSAEYVRLYRNGIYAPHWNINANSLLYVIRGEGRVRIVNSQGNAVFDNKVRKGQLVVVPQNFVVAEQAGEEEGLEYLVFKTNDRAAVSHV---QQVFRATPADVLANAFGLRQRQVTELKLSGNRGPLVHPQSQSQ 333          
BLAST of CX047715 vs. ExPASy Swiss-Prot
Match: LEGB4_VICFA (Legumin type B OS=Vicia faba GN=LEB4 PE=3 SV=1)

HSP 1 Score: 178.718 bits (452), Expect = 3.746e-44
Identity = 97/221 (43.89%), Postives = 138/221 (62.44%), Query Frame = -1
Query:  212 QRGIIIRVEEELRVLSPQRDRXXXXXXXXETPSYERD-NGFEETICTMKLRHNIDKPSHADVYNPRAGRVTTVNRFNLPILRDLQLSAEKGNLYPNALLAPQWNLNAHSIVYVTRGNGRMQIVAENGENVFDGQIREGQLIVVPQGFAVVKRAG-NRGLEWISFKTNDVAMTSQLAGRASVLRGLPLDVIQNSFQVSRDEAQRLKYNRQELTVFTPGPRSQ 868
            +R  I+RVE  LR+++P+  +        E    E+  NG EETIC++K+R NI +P+ AD+YNPRAG ++T N   LPILR L+LSAE   LY N + AP WN+NA+S++YV RG GR++IV   G  VFD ++ +GQL+VVPQ F V ++AG   GLE++ FKTND A  S +     V R  P DV+ N+F + + +   LK +     +  P  +SQ
Sbjct:  265 KRNQIVRVEGGLRIINPEGQQEEEEEEEEEKQRSEQGRNGLEETICSLKIRENIAQPARADLYNPRAGSISTANSLTLPILRYLRLSAEYVRLYRNGIYAPHWNINANSLLYVIRGEGRVRIVNSQGNAVFDNKVTKGQLVVVPQNFVVAEQAGEEEGLEYLVFKTNDRAAVSHV---QQVFRATPADVLANAFGLRQRQVTELKLSGNRGPLVHPQSQSQ 482          
The following BLAST results are available for this feature:
BLAST of CX047715 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 42
Match NameE-valueIdentityDescription
GLUB1_ORYSJ1.420e-5145.45Glutelin type-B 1 OS=Oryza sativa subsp. japonica ... [more]
CRU2_BRANA5.967e-5045.25Cruciferin BnC2 OS=Brassica napus GN=BnC2 PE=3 SV=... [more]
GLUB2_ORYSJ7.793e-5044.10Glutelin type-B 2 OS=Oryza sativa subsp. japonica ... [more]
SSG2_AVESA2.961e-4940.4912S seed storage globulin 2 OS=Avena sativa PE=3 S... [more]
11S2_SESIN6.597e-4943.5811S globulin seed storage protein 2 OS=Sesamum ind... [more]
SSG1_AVESA2.772e-4747.7512S seed storage globulin 1 OS=Avena sativa PE=2 S... [more]
LEGB7_VICFA7.548e-4544.34Legumin type B (Fragment) OS=Vicia faba GN=LEB7 PE... [more]
LEGB6_VICFA7.548e-4544.34Legumin type B (Fragment) OS=Vicia faba GN=LEB6 PE... [more]
LEGB2_VICFA7.548e-4544.34Legumin type B (Fragment) OS=Vicia faba GN=LEB2 PE... [more]
LEGB4_VICFA3.746e-4443.89Legumin type B OS=Vicia faba GN=LEB4 PE=3 SV=1[more]

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Properties
Property NameValue
Genbank descriptionUCRCS09_16A12_b Ruby Orange Developing Seed cDNA Library UCRCS09 Citrus sinensis cDNA clone UCRCS09-16A12-A23-1-6.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX047715 ID=CX047715; Name=CX047715; organism=Citrus sinensis; type=EST; length=874bp
TTTTTTTTTTTGAACAAAGAAATATTACTTTTTATTTTACTCGCACATTA
AACTTACATACAGTCCCGCAGCATTCATGTCGTTCATGCCCATTAAGGCT
TTTATTCATACATAGTCGTCCCTACCTCAACTACTTACACTACACTACAT
AGCTTACTTCCTGATTACGTACCCATTTACATAATTTCTCTTAGGCTACG
GTTAAGCCCCACTGTGACCTAGGCCCTGGAGTAAACACAGTCAGCTCCTG
CCTGTTGTACTTCAACCTCTGAGCTTCATCCCTCGACACTTGGAACGAGT
TCTGGATAACGTCCAACGGAAGTCCTCTTAACACCGAAGCCCTTCCGGCC
AGCTGGCTTGTCATGGCGACGTCGTTTGTCTTGAATGATATCCACTCCAG
TCCACGGTTACCTGCCCTCTTCACCACGGCGAAGCCCTGCGGAACAACGA
TCAGCTGACCCTCCCGGATTTGACCGTCGAACACATTCTCCCCGTTCTCC
GCTACAATTTGCATCCTGCCGTTGCCCCTTGTTACGTAGACTATGCTGTG
GGCATTCAAGTTCCACTGTGGCGCCAACAGGGCATTCGGGTAAAGGTTTC
CTTTCTCAGCACTAAGCTGGAGGTCTCGAAGGATAGGAAGGTTGAATCTG
TTCACGGTGGTGACACGTCCGGCCCGGGGGTTGTAGACGTCAGCATGTGA
TGGTTTATCGATGTTGTGCCTTAGTTTCATTGTACAGATAGTTTCCTCGA
AGCCATTGTCCCTTTCATATGACGGAGTTTCTTCGCATTCTTCCTGTTCT
TGTTCTCTGTCTCTTTGAGGAGACAGTACTCTCAGCTCTTCCTCGACTCT
GATGATAATGCCCCTCTGTATCTG
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