CX047685

Overview
NameCX047685
Unique NameCX047685
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length737
Libraries
Library NameType
Ruby Orange Developing Seed cDNA Library UCRCS09cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX047685 vs. ExPASy Swiss-Prot
Match: CATV_NPVHZ (Viral cathepsin OS=Heliothis zea nuclear polyhedrosis virus GN=VCATH PE=3 SV=1)

HSP 1 Score: 99.3673 bits (246), Expect = 2.180e-20
Identity = 53/140 (37.86%), Postives = 81/140 (57.86%), Query Frame = -3
Query:  313 AYKYLIATGGLEEESSYPYIGKRGKCQFDSEKIAVRVANFTNIPV-DENQIAAHLVHHGPLAIGLNAIFMQTYIGGVSCPLICGKKWLNHGVLLVGYGAKGFSILRLGNQPYWIIKNSWGKQWGDHGYYRLCRGRGMCGM 729
            A++ L+  GG+E E+ YPY G    C  D+ KIAV++ +     + DEN++   +   GP+AI ++A+ +  Y  G+     C    LNH VLL+G+G +        N PYWIIKNSWG+ WG++G+ R+ R    CG+
Sbjct:  226 AFQELLLMGGVETEADYPYQGSEQMCTLDNRKIAVKLNSCFKYDIRDENKLKELVYTTGPVAIAVDAMDIINYRRGILNQ--CHIYDLNHAVLLIGWGIEN-------NVPYWIIKNSWGEDWGENGFLRVRRNVNACGL 356          
BLAST of CX047685 vs. ExPASy Swiss-Prot
Match: CATH_MOUSE (Cathepsin H OS=Mus musculus GN=Ctsh PE=2 SV=1)

HSP 1 Score: 99.3673 bits (246), Expect = 2.180e-20
Identity = 54/146 (36.99%), Postives = 80/146 (54.79%), Query Frame = -3
Query:  313 TNAYKYLIATGGLEEESSYPYIGKRGKCQFDSEKIAVRVANFTNIPV-DENQIAAHLVHHGPLAIGLNAI--FMQTYIGGVSCPLICGKK--WLNHGVLLVGYGAKGFSILRLGNQPYWIIKNSWGKQWGDHGYYRLCRGRGMCGM 735
            + A++Y++   G+ EE SYPYIGK   C+F+ +K    V N  NI + DE  +   +  + P++        F+  Y  GV     C K    +NH VL VGYG +   +       YWI+KNSWG QWG++GY+ + RG+ MCG+
Sbjct:  185 SQAFEYILYNKGIMEEDSYPYIGKDSSCRFNPQKAVAFVKNVVNITLNDEAAMVEAVALYNPVSFAFEVTEDFLM-YKSGVYSSKSCHKTPDKVNHAVLAVGYGEQNGLL-------YWIVKNSWGSQWGENGYFLIERGKNMCGL 322          
BLAST of CX047685 vs. ExPASy Swiss-Prot
Match: CATL1_SHEEP (Cathepsin L1 OS=Ovis aries GN=CTSL PE=1 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 2.848e-20
Identity = 51/145 (35.17%), Postives = 78/145 (53.79%), Query Frame = -3
Query:  307 NAYKYLIATGGLEEESSYPYIGKRGKCQFDSEKIAVRVANFTNIPVDENQIAAHLVHHGPLAIGLNA--IFMQTYIGGVSCPLICGKKWLNHGVLLVGYGAKGFSILRLGNQPYWIIKNSWGKQWGDHGYYRLCRGR-GMCGMNT 732
            NA++Y+   GGL+ E SYPY      C +  E  A +   F +IP  E  +   +   GP+++ ++A     Q Y  G+     C  K L+HGVL+VGYG +G       N  +WI+KNSWG +WG+ GY ++ + +   CG+ T
Sbjct:   72 NAFQYIKENGGLDSEESYPYEATDTSCNYKPEYSAAKDTGFVDIPQREKALMKAVATVGPISVAIDAGHSSFQFYKSGIYYDPDCSSKDLDHGVLVVGYGFEG------TNNKFWIVKNSWGPEWGNKGYVKMAKDQNNHCGIAT 210          
BLAST of CX047685 vs. ExPASy Swiss-Prot
Match: CYSP2_HOMAM (Digestive cysteine proteinase 2 OS=Homarus americanus GN=LCP2 PE=2 SV=1)

HSP 1 Score: 98.2117 bits (243), Expect = 4.857e-20
Identity = 51/147 (34.69%), Postives = 80/147 (54.42%), Query Frame = -3
Query:  304 NAYKYLIATGGLEEESSYPYIGKRGKCQFDSEKIAVRVANFTNIPV-DENQIAAHLVHHGPLAIGLNAIF--MQTYIGGVSCPLICGKKWLNHGVLLVGYGAKGFSILRLGNQPYWIIKNSWGKQWGDHGYYRLCRGR-GMCGMNTM 732
            +A+ Y+ A  G++ E++YPY  + G C+FDS  +A   +  TNI    E  +   +   GP+++ ++A     Q Y  GV     C   +L+H VL VGYG++       G Q +W++KNSW   WGD GY ++ R R   CG+ T+
Sbjct:  178 DAFDYIKANNGIDTEAAYPYEARDGSCRFDSNSVAATCSGHTNIASGSETGLQQAVRDIGPISVTIDAAHSSFQFYSSGVYYEPSCSPSYLDHAVLAVGYGSE-------GGQDFWLVKNSWATSWGDAGYIKMSRNRNNNCGIATV 317          
BLAST of CX047685 vs. ExPASy Swiss-Prot
Match: CATS_SAIBB (Cathepsin S OS=Saimiri boliviensis boliviensis GN=CTSS PE=2 SV=1)

HSP 1 Score: 98.2117 bits (243), Expect = 4.857e-20
Identity = 52/145 (35.86%), Postives = 81/145 (55.86%), Query Frame = -3
Query:  313 TNAYKYLIATGGLEEESSYPYIGKRGKCQFDSEKIAVRVANFTNIPVDENQIAAHLV-HHGPLAIGLNAIFMQ--TYIGGVSCPLICGKKWLNHGVLLVGYGAKGFSILRLGNQPYWIIKNSWGKQWGDHGYYRLCRGRG-MCGM 735
            T A++Y+I   G++ E+SYPY     KCQ+DS+  A   + +T +P     +    V + GP+ +G++A       Y  GV     C +K +NHGVL++GYG        L  + YW++KNSWG  +G+ GY R+ R +G  CG+
Sbjct:  185 TEAFQYIIDNKGIDSEASYPYKATDQKCQYDSKYRAATCSKYTELPYGREDVLKEAVANKGPVCVGVDASHPSFFLYRSGVYYDPACTQK-VNHGVLVIGYG-------DLNGKEYWLVKNSWGSNFGEQGYIRMARNKGNHCGI 321          
BLAST of CX047685 vs. ExPASy Swiss-Prot
Match: CATL1_FELCA (Cathepsin L1 (Fragment) OS=Felis catus GN=CTSL1 PE=2 SV=1)

HSP 1 Score: 98.2117 bits (243), Expect = 4.857e-20
Identity = 49/137 (35.77%), Postives = 76/137 (55.47%), Query Frame = -3
Query:  328 NAYKYLIATGGLEEESSYPYIGKRGKCQFDSEKIAVRVANFTNIPVDENQIAAHLVHHGPLAIGLNAIF--MQTYIGGVSCPLICGKKWLNHGVLLVGYGAKGFSILRLGNQPYWIIKNSWGKQWGDHGYYRLCRGR 732
            +A++Y+   GGL+ E SYPY  +   C++  E     V ++ +IP  EN++   L   GP++  ++A     + Y  G+     C  + ++HGVL+VGYGA G       N+ YWIIKNSWG  WG  GY ++ + R
Sbjct:    6 DAFQYVKDNGGLDSEESYPYHAQGDSCKYRPENSVANVTDYWDIPSKENELMITLAAVGPISAAIDASLDTFRFYKEGIYYDPSCSSEDVDHGVLVVGYGADG---TETENKKYWIIKNSWGTDWGMDGYIKMAKDR 139          
BLAST of CX047685 vs. ExPASy Swiss-Prot
Match: CATQ_RAT (Cathepsin Q OS=Rattus norvegicus GN=Ctsq PE=2 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 6.344e-20
Identity = 49/137 (35.77%), Postives = 79/137 (57.66%), Query Frame = -3
Query:  328 NAYKYLIATGGLEEESSYPYIGKRGKCQFDSEKIAVRVANFTNIPVDENQIAAHLVHHGPLAIGLNAI--FMQTYIGGVSCPLICGKKWLNHGVLLVGYGAKGFSILRLGNQPYWIIKNSWGKQWGDHGYYRLCRGR 732
            NA++Y++  GGLE E++YPY  K G C+++ +  + ++  F  +P  E+ +   +   GP+A G++ I    + Y  GV     C   ++NH VL+VGYG +G          YW+IKNSWGK+WG  GY ++ + R
Sbjct:  196 NAFQYVLHNGGLEAEATYPYERKEGVCRYNPKNSSAKITGFVVLPESEDVLMDAVATKGPIATGVHVISSSFRFYQKGVYHEPKC-SSYVNHAVLVVGYGFEG---NETDGNNYWLIKNSWGKRWGLRGYMKIAKDR 328          
BLAST of CX047685 vs. ExPASy Swiss-Prot
Match: ALEU_HORVU (Thiol protease aleurain OS=Hordeum vulgare PE=2 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 6.344e-20
Identity = 56/149 (37.58%), Postives = 81/149 (54.36%), Query Frame = -3
Query:  307 TNAYKYLIATGGLEEESSYPYIGKRGKCQFDSEKIAVRVANFTNIPV---DENQIAAHLVHHGPLAIGLNAIF-MQTYIGGVSCPLICGKKW--LNHGVLLVGYGAKGFSILRLGNQPYWIIKNSWGKQWGDHGYYRLCRGRGMCGMNT 735
            + A++Y+   GG++ E SYPY G  G C + +E  AV+V +  NI +   DE + A  LV   P+++    I   + Y  GV     CG     +NH VL VGYG +          PYW+IKNSWG  WGD+GY+++  G+ MC + T
Sbjct:  214 SQAFEYIKYNGGIDTEESYPYKGVNGVCHYKAENAAVQVLDSVNITLNAEDELKNAVGLVR--PVSVAFQVIDGFRQYKSGVYTSDHCGTTPDDVNHAVLAVGYGVEN-------GVPYWLIKNSWGADWGDNGYFKMEMGKNMCAIAT 353          
BLAST of CX047685 vs. ExPASy Swiss-Prot
Match: LMCPA_LEIME (Cysteine proteinase A OS=Leishmania mexicana GN=LMCPA PE=2 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 1.082e-19
Identity = 51/132 (38.64%), Postives = 70/132 (53.03%), Query Frame = -3
Query:  319 GGLEEESSYPYI---GKRGKCQFDSEKIAVRVANFTNIPVDENQIAAHLVHHGPLAIGLNAIFMQTYIGGVSCPLICGKKWLNHGVLLVGYGAKGFSILRLGNQPYWIIKNSWGKQWGDHGYYRLCRGRGMC 705
            G +  E+SYPY    G R  C  D  ++  ++  F ++P DE +IA  +   GP+A+ ++A   Q Y GGV    +C    LNHGVL+VG+             PYWI+KNSWG  WG+ GY RL  G   C
Sbjct:  209 GSVFTEASYPYTSGGGTRPPCH-DEGEVGAKITGFLSLPHDEERIAEWVEKRGPVAVAVDATTWQLYFGGVVS--LCLAWSLNHGVLIVGFNKNA-------KPPYWIVKNSWGSSWGEKGYIRLAMGSNQC 330          
BLAST of CX047685 vs. ExPASy Swiss-Prot
Match: CYSP1_LEIPI (Cysteine proteinase 1 OS=Leishmania pifanoi GN=CYS1 PE=2 SV=2)

HSP 1 Score: 97.0561 bits (240), Expect = 1.082e-19
Identity = 51/132 (38.64%), Postives = 70/132 (53.03%), Query Frame = -3
Query:  319 GGLEEESSYPYI---GKRGKCQFDSEKIAVRVANFTNIPVDENQIAAHLVHHGPLAIGLNAIFMQTYIGGVSCPLICGKKWLNHGVLLVGYGAKGFSILRLGNQPYWIIKNSWGKQWGDHGYYRLCRGRGMC 705
            G +  E+SYPY    G R  C  D  ++  ++  F ++P DE +IA  +   GP+A+ ++A   Q Y GGV    +C    LNHGVL+VG+             PYWI+KNSWG  WG+ GY RL  G   C
Sbjct:  209 GSVFTEASYPYTSGGGTRPPCH-DEGEVGAKITGFLSLPHDEERIAEWVEKRGPVAVAVDATTWQLYFGGVVS--LCLAWSLNHGVLIVGFNKNA-------KPPYWIVKNSWGSSWGEKGYIRLAMGSNQC 330          
The following BLAST results are available for this feature:
BLAST of CX047685 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 144
Match NameE-valueIdentityDescription
CATV_NPVHZ2.180e-2037.86Viral cathepsin OS=Heliothis zea nuclear polyhedro... [more]
CATH_MOUSE2.180e-2036.99Cathepsin H OS=Mus musculus GN=Ctsh PE=2 SV=1[more]
CATL1_SHEEP2.848e-2035.17Cathepsin L1 OS=Ovis aries GN=CTSL PE=1 SV=1[more]
CYSP2_HOMAM4.857e-2034.69Digestive cysteine proteinase 2 OS=Homarus america... [more]
CATS_SAIBB4.857e-2035.86Cathepsin S OS=Saimiri boliviensis boliviensis GN=... [more]
CATL1_FELCA4.857e-2035.77Cathepsin L1 (Fragment) OS=Felis catus GN=CTSL1 PE... [more]
CATQ_RAT6.344e-2035.77Cathepsin Q OS=Rattus norvegicus GN=Ctsq PE=2 SV=1[more]
ALEU_HORVU6.344e-2037.58Thiol protease aleurain OS=Hordeum vulgare PE=2 SV... [more]
LMCPA_LEIME1.082e-1938.64Cysteine proteinase A OS=Leishmania mexicana GN=LM... [more]
CYSP1_LEIPI1.082e-1938.64Cysteine proteinase 1 OS=Leishmania pifanoi GN=CYS... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS09_15H08_b Ruby Orange Developing Seed cDNA Library UCRCS09 Citrus sinensis cDNA clone UCRCS09-15H08-P16-1-5.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX047685 ID=CX047685; Name=CX047685; organism=Citrus sinensis; type=EST; length=737bp
TTTTTTTTTTTTTTTTTGCAACAGAAATTAAGGATAAAATATACCCAAAA
TACTTTCTGGAAGACACAATAGTATGTAGAAAAGCAGGTCTGAAAAGCAT
TTTCGAGTCTAATCCAGAACTTACTTGAGAAAGGGGAATTATGAAACCGG
AAAAGCTTCAATAATTAGAAGATCACAAACAAGAACAAAAGGGAAACTAG
CTACCATATAACATGAGCTGTCTATATTGCTTTCTGTAGATATTCCAACT
TAATAAGAGGGACTTCAAGTTTAGGAGGAGACTTGAGTGACCACTGCAGA
AACCATGGTGTTCATTCCACACATGCCACGCCCTCGGCAGAGCCGGTAAT
ACCCATGGTCTCCCCATTGCTTGCCCCACGAATTCTTGATGATCCAATAC
GGCTGGTTTCCAAGCCTAAGAATTGAGAAGCCCTTGGCACCATACCCGAC
GAGCAGAACGCCGTGGTTGAGCCATTTCTTGCCGCAGATTAGCGGGCATG
AGACTCCCCCAATGTATGTTTGCATGAATATAGCGTTCAACCCAATAGCC
AGAGGACCGTGGTGGACTAAATGTGCAGCAATTTGGTTCTCATCGACAGG
AATATTGGTAAAATTTGCAACTCGAACGGCTATTTTCTCTGAATCGAATT
GGCATTTGCCACGCTTCCCAATATAAGGATATGAACTCTCCTCTTCTAGC
CCTCCAGTCGCGATCAAATATTTGTATGCATTTGTCA
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