CX047685

Overview
NameCX047685
Unique NameCX047685
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length737
Libraries
Library NameType
Ruby Orange Developing Seed cDNA Library UCRCS09cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX047685 vs. ExPASy Swiss-Prot
Match: CATK_PIG (Cathepsin K OS=Sus scrofa GN=CTSK PE=2 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 1.120e-16
Identity = 47/145 (32.41%), Postives = 75/145 (51.72%), Query Frame = -3
Query:  313 TNAYKYLIATGGLEEESSYPYIGKRGKCQFDSEKIAVRVANFTNIPV-DENQIAAHLVHHGPLAIGLNAIF--MQTYIGGVSCPLICGKKWLNHGVLLVGYGAKGFSILRLGNQPYWIIKNSWGKQWGDHGYYRLCRGR-GMCGM 735
            TNA++Y+    G++ E +YPY+G+   C ++    A +   +  IP  +E  +   +   GP+++ ++A     Q Y  GV     C    LNH VL VGYG +         + +WIIKNSWG+ WG+ GY  + R +   CG+
Sbjct:  184 TNAFQYVQKNRGIDSEDAYPYVGQDENCMYNPTGKAAKCRGYREIPEGNEKALKRAVARVGPVSVAIDASLTSFQFYSKGVYYDENCNSDNLNHAVLAVGYGIQK-------GKKHWIIKNSWGENWGNKGYILMARNKNNACGI 321          
BLAST of CX047685 vs. ExPASy Swiss-Prot
Match: ACTN_ACTCH (Actinidain OS=Actinidia chinensis PE=1 SV=4)

HSP 1 Score: 87.0409 bits (214), Expect = 1.120e-16
Identity = 52/152 (34.21%), Postives = 80/152 (52.63%), Query Frame = -3
Query:  304 TNAYKYLIATGGLEEESSYPYIGKRGKCQFD--SEKIAVRVANFTNIPVDENQIAAHLVHHGPLAIGLNAI---FMQTYIGGVSCPLICGKKWLNHGVLLVGYGAKGFSILRLGNQPYWIIKNSWGKQWGDHGYYRLCR---GRGMCGMNTM 735
            T+ ++++I  GG+  E +YPY  + G+C  D  +EK  V +  + N+P +        V + P+++ L+A    F Q   G  + P  CG   ++H V +VGYG +G          YWI+KNSW   WG+ GY R+ R   G G CG+ TM
Sbjct:  197 TDGFQFIINNGGINTEENYPYTAQDGECNVDLQNEKY-VTIDTYENVPYNNEWALQTAVTYQPVSVALDAAGDAFKQYSSGIFTGP--CGTA-VDHAVTIVGYGTEG-------GIDYWIVKNSWDTTWGEEGYMRILRNVGGAGTCGIATM 337          
BLAST of CX047685 vs. ExPASy Swiss-Prot
Match: CATLL_PHACE (Cathepsin L-like proteinase OS=Phaedon cochleariae PE=2 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 1.910e-16
Identity = 49/145 (33.79%), Postives = 73/145 (50.34%), Query Frame = -3
Query:  304 NAYKYLIATGGLEEESSYPYIGKRGKCQF-DSEKIAVRVANFTNIPVDENQIAAHLVHHGPLAIGLNAIFMQTYIGGVSCPLICGKKWLNHGVLLVGYGAKGFSILRLGNQPYWIIKNSWGKQWGDHGYYRLCRGRG-MCGMNTM 732
            N ++Y +   GLE ++ YPY GK  KC+  D  +  V +  +  +   E  +   +   GP++  +    M++Y GG+     C    L+HGV +VGYG +         Q YWIIKN+WG  WG+ GY RL R     CG+  M
Sbjct:  181 NGFEY-VKDNGLESDADYPYSGKEDKCKANDKSRSVVELTGYKKVTASETSLKEAVGTIGPISAVVFGKPMKSYGGGIFDDSSCLGDNLHHGVNVVGYGIEN-------GQKYWIIKNTWGADWGESGYIRLIRDTDHSCGVEKM 317          
BLAST of CX047685 vs. ExPASy Swiss-Prot
Match: CATH_PIG (Cathepsin H OS=Sus scrofa GN=CTSH PE=1 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 1.910e-16
Identity = 49/146 (33.56%), Postives = 75/146 (51.37%), Query Frame = -3
Query:  313 TNAYKYLIATGGLEEESSYPYIGKRGKCQFDSEKIAVRVANFTNIPV-DENQIAAHLVHHGPLAIGLNAI--FMQTYIGGVSCPLICGKK--WLNHGVLLVGYGAKGFSILRLGNQPYWIIKNSWGKQWGDHGYYRLCRGRGMCGM 735
            + A++Y+    G+  E +YPY G+   C+F  +K    V +  NI + DE  +   +  + P++        F+  Y  G+     C K    +NH VL VGYG +          PYWI+KNSWG QWG +GY+ + RG+ MCG+
Sbjct:  187 SQAFEYIRYNKGIMGEDTYPYKGQDDHCKFQPDKAIAFVKDVANITMNDEEAMVEAVALYNPVSFAFEVTNDFLM-YRKGIYSSTSCHKTPDKVNHAVLAVGYGEEN-------GIPYWIVKNSWGPQWGMNGYFLIERGKNMCGL 324          
BLAST of CX047685 vs. ExPASy Swiss-Prot
Match: ORYB_ORYSJ (Oryzain beta chain OS=Oryza sativa subsp. japonica GN=Os04g0670200 PE=1 SV=2)

HSP 1 Score: 85.8853 bits (211), Expect = 2.495e-16
Identity = 50/150 (33.33%), Postives = 76/150 (50.67%), Query Frame = -3
Query:  304 NAYKYLIATGGLEEESSYPYIGKRGKCQFDSEKI-AVRVANFTNIPVDENQIAAHLVHHGPLAIGLNA--IFMQTYIGGVSCPLICGKKWLNHGVLLVGYGAKGFSILRLGNQPYWIIKNSWGKQWGDHGYYRLCRG----RGMCGMNTM 732
            +A+ ++I  GG++ E  YPY    GKC  + E    V +  F ++P ++ +     V H P+++ + A     Q Y  GV     CG   L+HGV+ VGYG           + YWI++NSWG +WG+ GY R+ R      G CG+  M
Sbjct:  212 DAFDFIIKNGGIDTEDDYPYKAVDGKCDINRENAKVVSIDGFEDVPQNDEKSLQKAVAHQPVSVAIEAGGREFQLYHSGVFSGR-CGTS-LDHGVVAVGYGTDN-------GKDYWIVRNSWGPKWGESGYVRMERNINVTTGKCGIAMM 352          
BLAST of CX047685 vs. ExPASy Swiss-Prot
Match: ACTN_ACTDE (Actinidain OS=Actinidia deliciosa PE=1 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 2.495e-16
Identity = 51/152 (33.55%), Postives = 79/152 (51.97%), Query Frame = -3
Query:  304 TNAYKYLIATGGLEEESSYPYIGKRGKCQFD--SEKIAVRVANFTNIPVDENQIAAHLVHHGPLAIGLNAI---FMQTYIGGVSCPLICGKKWLNHGVLLVGYGAKGFSILRLGNQPYWIIKNSWGKQWGDHGYYRLCR---GRGMCGMNTM 735
            T+ ++++I  GG+  E +YPY  + G+C  D  +EK  V +  + N+P +        V + P+++ L+A    F     G  + P  CG   ++H V +VGYG +G          YWI+KNSW   WG+ GY R+ R   G G CG+ TM
Sbjct:  197 TDGFQFIINNGGINTEENYPYTAQDGECNLDLQNEKY-VTIDTYENVPYNNEWALQTAVTYQPVSVALDAAGDAFKHYSSGIFTGP--CGTA-IDHAVTIVGYGTEG-------GIDYWIVKNSWDTTWGEEGYMRILRNVGGAGTCGIATM 337          
BLAST of CX047685 vs. ExPASy Swiss-Prot
Match: RD21A_ARATH (Cysteine proteinase RD21a OS=Arabidopsis thaliana GN=RD21A PE=1 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 4.255e-16
Identity = 48/146 (32.88%), Postives = 75/146 (51.37%), Query Frame = -3
Query:  313 AYKYLIATGGLEEESSYPYIGKRGKC-QFDSEKIAVRVANFTNIPVDENQIAAHLVHHGPLAIGLNA--IFMQTYIGGVSCPLICGKKWLNHGVLLVGYGAKGFSILRLGNQPYWIIKNSWGKQWGDHGYYRLCR----GRGMCGM 729
            A++++I  GG++ +  YPY G  G C Q       V + ++ ++P    +     V H P++I + A     Q Y  G+     CG + L+HGV+ VGYG +         + YWI++NSWGK WG+ GY R+ R      G CG+
Sbjct:  208 AFEFIIKNGGIDTDKDYPYKGVDGTCDQIRKNAKVVTIDSYEDVPTYSEESLKKAVAHQPISIAIEAGGRAFQLYDSGIFDGS-CGTQ-LDHGVVAVGYGTEN-------GKDYWIVRNSWGKSWGESGYLRMARNIASSSGKCGI 344          
BLAST of CX047685 vs. ExPASy Swiss-Prot
Match: CYSEP_PHAVU (Vignain OS=Phaseolus vulgaris PE=2 SV=2)

HSP 1 Score: 84.7297 bits (208), Expect = 5.558e-16
Identity = 50/149 (33.56%), Postives = 79/149 (53.02%), Query Frame = -3
Query:  313 NAYKYLIATGGLEEESSYPYIGKRGKCQFDSEKI---AVRVANFTNIPVDENQIAAHLVHHGPLAIGLNA--IFMQTYIGGVSCPLICGKKWLNHGVLLVGYGAKGFSILRLGNQPYWIIKNSWGKQWGDHGYYRLCRG----RGMCGM 732
            +A++++   GG+  ES+YPY  + G C  D+ K+   AV +    N+P ++       V + P+++ ++A     Q Y  GV     C    LNHGV +VGYG        +    YWI++NSWG +WG+HGY R+ R      G+CG+
Sbjct:  198 SAFEFIKQKGGITTESNYPYKAQEGTC--DASKVNDLAVSIDGHENVPANDEDALLKAVANQPVSVAIDAGGSDFQFYSEGVFTG-DCSTD-LNHGVAIVGYGTT------VDGTNYWIVRNSWGPEWGEHGYIRMQRNISKKEGLCGI 336          
BLAST of CX047685 vs. ExPASy Swiss-Prot
Match: CATV_NPVOP (Viral cathepsin OS=Orgyia pseudotsugata multicapsid polyhedrosis virus GN=VCATH PE=3 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 5.558e-16
Identity = 46/140 (32.86%), Postives = 73/140 (52.14%), Query Frame = -3
Query:  313 AYKYLIATGGLEEESSYPYIGKRGKCQFDSEKIAVRVANFTN-IPVDENQIAAHLVHHGPLAIGLNAIFMQTYIGGVSCPLICGKKWLNHGVLLVGYGAKGFSILRLGNQPYWIIKNSWGKQWGDHGYYRLCRGRGMCGM 729
            A++  +  GG++ ES YPY    G+C+ +  +  V V +    I + E ++   L   GP+ + ++A  +  Y  G+     C    LNH VLLVGY  +        N PYWI+KN+WG  WG+ GY+R+ +    CG+
Sbjct:  183 AFESAMEMGGVQMESDYPYETANGQCRINPNRFVVGVRSCRRYIVMFEEKLKDLLRAVGPIPVAIDASDIVNYRRGIMRQ--CANHGLNHAVLLVGYAVEN-------NIPYWILKNTWGTDWGEDGYFRVQQNINACGI 313          
BLAST of CX047685 vs. ExPASy Swiss-Prot
Match: CATS_RAT (Cathepsin S OS=Rattus norvegicus GN=Ctss PE=2 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 5.558e-16
Identity = 49/146 (33.56%), Postives = 78/146 (53.42%), Query Frame = -3
Query:  313 TNAYKYLIATGGLEEESSYPYIGKRGKCQFDSEKIAVRVANFTNIPV-DENQIAAHLVHHGPLAIGLNAIFMQT---YIGGVSCPLICGKKWLNHGVLLVGYGAKGFSILRLGNQPYWIIKNSWGKQWGDHGYYRLCR-GRGMCGM 735
            T A++Y+I T  ++ E+SYPY     KC +D +  A   + +  +P  DE  +   +   GP+++G++     +   Y  GV     C +  +NHGVL+VGYG        L  + YW++KNSWG  +GD GY R+ R  +  CG+
Sbjct:  185 TEAFQYIIDTS-IDSEASYPYKAMDEKCLYDPKNRAATCSRYIELPFGDEEALKEAVATKGPVSVGIDDASHSSFFLYQSGVYDDPSCTEN-MNHGVLVVGYGT-------LDGKDYWLVKNSWGLHFGDQGYIRMARNNKNHCGI 321          
The following BLAST results are available for this feature:
BLAST of CX047685 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 144
Match NameE-valueIdentityDescription
CATK_PIG1.120e-1632.41Cathepsin K OS=Sus scrofa GN=CTSK PE=2 SV=1[more]
ACTN_ACTCH1.120e-1634.21Actinidain OS=Actinidia chinensis PE=1 SV=4[more]
CATLL_PHACE1.910e-1633.79Cathepsin L-like proteinase OS=Phaedon cochleariae... [more]
CATH_PIG1.910e-1633.56Cathepsin H OS=Sus scrofa GN=CTSH PE=1 SV=1[more]
ORYB_ORYSJ2.495e-1633.33Oryzain beta chain OS=Oryza sativa subsp. japonica... [more]
ACTN_ACTDE2.495e-1633.55Actinidain OS=Actinidia deliciosa PE=1 SV=1[more]
RD21A_ARATH4.255e-1632.88Cysteine proteinase RD21a OS=Arabidopsis thaliana ... [more]
CYSEP_PHAVU5.558e-1633.56Vignain OS=Phaseolus vulgaris PE=2 SV=2[more]
CATV_NPVOP5.558e-1632.86Viral cathepsin OS=Orgyia pseudotsugata multicapsi... [more]
CATS_RAT5.558e-1633.56Cathepsin S OS=Rattus norvegicus GN=Ctss PE=2 SV=1[more]

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Properties
Property NameValue
Genbank descriptionUCRCS09_15H08_b Ruby Orange Developing Seed cDNA Library UCRCS09 Citrus sinensis cDNA clone UCRCS09-15H08-P16-1-5.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX047685 ID=CX047685; Name=CX047685; organism=Citrus sinensis; type=EST; length=737bp
TTTTTTTTTTTTTTTTTGCAACAGAAATTAAGGATAAAATATACCCAAAA
TACTTTCTGGAAGACACAATAGTATGTAGAAAAGCAGGTCTGAAAAGCAT
TTTCGAGTCTAATCCAGAACTTACTTGAGAAAGGGGAATTATGAAACCGG
AAAAGCTTCAATAATTAGAAGATCACAAACAAGAACAAAAGGGAAACTAG
CTACCATATAACATGAGCTGTCTATATTGCTTTCTGTAGATATTCCAACT
TAATAAGAGGGACTTCAAGTTTAGGAGGAGACTTGAGTGACCACTGCAGA
AACCATGGTGTTCATTCCACACATGCCACGCCCTCGGCAGAGCCGGTAAT
ACCCATGGTCTCCCCATTGCTTGCCCCACGAATTCTTGATGATCCAATAC
GGCTGGTTTCCAAGCCTAAGAATTGAGAAGCCCTTGGCACCATACCCGAC
GAGCAGAACGCCGTGGTTGAGCCATTTCTTGCCGCAGATTAGCGGGCATG
AGACTCCCCCAATGTATGTTTGCATGAATATAGCGTTCAACCCAATAGCC
AGAGGACCGTGGTGGACTAAATGTGCAGCAATTTGGTTCTCATCGACAGG
AATATTGGTAAAATTTGCAACTCGAACGGCTATTTTCTCTGAATCGAATT
GGCATTTGCCACGCTTCCCAATATAAGGATATGAACTCTCCTCTTCTAGC
CCTCCAGTCGCGATCAAATATTTGTATGCATTTGTCA
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