CX047683

Overview
NameCX047683
Unique NameCX047683
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length823
Libraries
Library NameType
Ruby Orange Developing Seed cDNA Library UCRCS09cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX047683 vs. ExPASy Swiss-Prot
Match: LEGA_PEA (Legumin A OS=Pisum sativum GN=LEGA PE=2 SV=1)

HSP 1 Score: 159.073 bits (401), Expect = 2.785e-38
Identity = 80/210 (38.10%), Postives = 114/210 (54.29%), Query Frame = 3
Query:  165 CNIQNLNALEPRQKVESEAGVTEFWDQNNEQLQCANVAVFRQRIQQRGLLVPAYTNTPEIFYVVQGRGIHGVVFPGCAETXXXXXXXXXXXXXXXXXXHQKVRQLREGDVIALPAGAAHWIYNNGRDQLVLVALVDVGNSQNQLDQYFRKFYLGGNPQPQLXXXXXXXXXXXXXXXXXXXXXXXNLFRGFDERLLAEAFNVNPDLIXRLQ 794
            C ++ L+ALEP  ++ESE G+ E W+ NN+Q +CA VA+ R  +Q+  L  P Y+N P+  ++ QG G  G+VFPGC ET                  HQKV + REGD+IA+P G   W+YN+    ++ V+L D+ +S NQLDQ  R+FYL GN + +                        N+F GF    L +AFNVN  ++ RLQ
Sbjct:   31 CQLERLDALEPDNRIESEGGLIETWNPNNKQFRCAGVALSRATLQRNALRRPYYSNAPQEIFIQQGNGYFGMVFPGCPETFEEPQESEQGEGRRYRDRHQKVNRFREGDIIAVPTGIVFWMYNDQDTPVIAVSLTDIRSSNNQLDQMPRRFYLAGNHEQEF-----LQYQHQQGGKQEQENEGNNIFSGFKRDYLEDAFNVNRHIVDRLQ 235          
BLAST of CX047683 vs. ExPASy Swiss-Prot
Match: LEGJ_PEA (Legumin J OS=Pisum sativum GN=LEGJ PE=1 SV=1)

HSP 1 Score: 157.147 bits (396), Expect = 1.058e-37
Identity = 81/237 (34.18%), Postives = 125/237 (52.74%), Query Frame = 3
Query:  165 CNIQNLNALEPRQKVESEAGVTEFWDQNNEQLQCANVAVFRQRIQQRGLLVPAYTNTPEIFYVVQGRGIHGVVFPGCAET--XXXXXXXXXXXXXXXXXXHQKVRQLREGDVIALPAGAAHWIYNNGRDQLVLVALVDVGNSQNQLDQYFRKFYLGGNPQPQL----------------XXXXXXXXXXXXXXXXXXXXXXXNLFRGFDERLLAEAFNVNPDLIXRLQRPQIQRGII 821
            C + ++NALEP  +VESEAG+TE W+ N+ +L+CA V++ R+ I   GL +P+++ +P++ +++QG+G+ G+ FPGC ET                    HQKVR+ R+GD+IA+P+G  +W YN+G + LV ++L+D  N  NQLD   R FYLGGNP+ +                                        ++  GF    LA+ FN   D   RL+ P+ +R  I
Sbjct:   33 CQLDSINALEPDHRVESEAGLTETWNPNHPELKCAGVSLIRRTIDPNGLHLPSFSPSPQLIFIIQGKGVLGLSFPGCPETYEEPRSSQSRQESRQQQGDSHQKVRRFRKGDIIAIPSGIPYWTYNHGDEPLVAISLLDTSNIANQLDSTPRVFYLGGNPETEFPETQEEQQGRHRQKHSYPVGRRSGHHQQEEESEEQNEGNSVLSGFSSEFLAQTFNTEEDTAKRLRSPRDERSQI 269          
BLAST of CX047683 vs. ExPASy Swiss-Prot
Match: GLUA2_ORYSJ (Glutelin type-A 2 OS=Oryza sativa subsp. japonica GN=GLUA2 PE=1 SV=1)

HSP 1 Score: 157.147 bits (396), Expect = 1.058e-37
Identity = 90/228 (39.47%), Postives = 116/228 (50.88%), Query Frame = 3
Query:  165 CNIQNLNALEPRQKVESEAGVTEFWDQNNEQLQCANVAVFRQRIQQRGLLVPAYTNTPEIFYVVQGRGIHGVVFPGCAET--------XXXXXXXXXXXXXXXXXXHQKVRQLREGDVIALPAGAAHWIYNNGRDQLVLVALVDVGNSQNQLDQYFRKFYLGGNPQ-PQLXXXXXXXXXXXXXXXXXXXXXXXNLFRGFDERLLAEAFNVNPDLIXRLQRPQIQRGII 821
            C    L A EP + V S+AG TEF+D +NE  QC  V+V R+ I+ RGLL+P YTN   + Y++QGRGI G  FPGC ET                          HQK+ + R+GDVIALPAG AHW YN+G   +V + + D+ N  NQLD   R F L GN + PQ                        N+F GF   LL+EAF ++  +  +LQ    QRG I
Sbjct:   46 CRFDRLQAFEPIRSVRSQAGTTEFFDVSNELFQCTGVSVVRRVIEPRGLLLPHYTNGASLVYIIQGRGITGPTFPGCPETYQQQFQQSGQAQLTESQSQSHKFKDEHQKIHRFRQGDVIALPAGVAHWCYNDGEVPVVAIYVTDINNGANQLDPRQRDFLLAGNKRNPQ-------------AYRREVEEWSQNIFSGFSTELLSEAFGISNQVARQLQCQNDQRGEI 260          
BLAST of CX047683 vs. ExPASy Swiss-Prot
Match: LEGB4_VICFA (Legumin type B OS=Vicia faba GN=LEB4 PE=3 SV=1)

HSP 1 Score: 155.992 bits (393), Expect = 2.358e-37
Identity = 82/237 (34.60%), Postives = 121/237 (51.05%), Query Frame = 3
Query:  165 CNIQNLNALEPRQKVESEAGVTEFWDQNNEQLQCANVAVFRQRIQQRGLLVPAYTNTPEIFYVVQGRGIHGVVFPGCAET--XXXXXXXXXXXXXXXXXXHQKVRQLREGDVIALPAGAAHWIYNNGRDQLVLVALVDVGNSQNQLDQYFRKFYLGGNP----------------QPQLXXXXXXXXXXXXXXXXXXXXXXXNLFRGFDERLLAEAFNVNPDLIXRLQRPQIQRGII 821
            C + N+NALEP  +VESEAG+TE W+ N+ +L+CA V++ R+ I   GL +P+Y+ +P++ Y++QG+G+ G+  PGC +T                    HQK+R+ R+GD+IA+P+G  +W YNNG + LV ++L+D  N  NQLD   R FYL GNP                Q                          ++  GF    LA  FN   D   RL+ P+ +R  I
Sbjct:   33 CRLDNINALEPDHRVESEAGLTETWNPNHPELRCAGVSLIRRTIDPNGLHLPSYSPSPQLIYIIQGKGVIGLTLPGCPQTYQEPRSSQSRQGSRQQQPDSHQKIRRFRKGDIIAIPSGIPYWTYNNGDEPLVAISLLDTSNIANQLDSTPRVFYLVGNPEVEFPETQEEQQERHQQKHSLPVGRRGGQHQQEEESEEQKDGNSVLSGFSSEFLAHTFNTEEDTAKRLRSPRDKRNQI 269          
BLAST of CX047683 vs. ExPASy Swiss-Prot
Match: GLUA1_ORYSJ (Glutelin type-A 1 OS=Oryza sativa subsp. japonica GN=GLUA1 PE=1 SV=2)

HSP 1 Score: 155.992 bits (393), Expect = 2.358e-37
Identity = 90/228 (39.47%), Postives = 116/228 (50.88%), Query Frame = 3
Query:  165 CNIQNLNALEPRQKVESEAGVTEFWDQNNEQLQCANVAVFRQRIQQRGLLVPAYTNTPEIFYVVQGRGIHGVVFPGCAE--------TXXXXXXXXXXXXXXXXXXHQKVRQLREGDVIALPAGAAHWIYNNGRDQLVLVALVDVGNSQNQLDQYFRKFYLGGNPQ-PQLXXXXXXXXXXXXXXXXXXXXXXXNLFRGFDERLLAEAFNVNPDLIXRLQRPQIQRGII 821
            C    L A EP + V S+AG TEF+D +NEQ QC  V+V R+ I+ RGLL+P YTN   + Y++QGRGI G  FPGC E        +                  HQK+ + R+GDVIALPAG AHW YN+G   +V + + D+ N  NQLD   R F L GN + PQ                        N+F GF   LL+EA  V+  +  +LQ    QRG I
Sbjct:   46 CRFDRLQAFEPIRSVRSQAGTTEFFDVSNEQFQCTGVSVVRRVIEPRGLLLPHYTNGASLVYIIQGRGITGPTFPGCPESYQQQFQQSGQAQLTESQSQSQKFKDEHQKIHRFRQGDVIALPAGVAHWCYNDGEVPVVAIYVTDLNNGANQLDPRQRDFLLAGNKRNPQ-------------AYRREVEERSQNIFSGFSTELLSEALGVSSQVARQLQCQNDQRGEI 260          
BLAST of CX047683 vs. ExPASy Swiss-Prot
Match: GLYG2_SOYBN (Glycinin G2 OS=Glycine max GN=Gy2 PE=1 SV=2)

HSP 1 Score: 151.754 bits (382), Expect = 4.446e-36
Identity = 81/214 (37.85%), Postives = 110/214 (51.40%), Query Frame = 3
Query:  165 CNIQNLNALEPRQKVESEAGVTEFWDQNNEQLQCANVAVFRQRIQQRGLLVPAYTNTPEIFYVVQGRGIHGVVFPGCAET-XXXXXXXXXXXXXXXXXXHQKVRQLREGDVIALPAGAAHWIYNNGRDQLVLVALVDVGNSQNQLDQYFRKFYLGGNPQPQL---XXXXXXXXXXXXXXXXXXXXXXXNLFRGFDERLLAEAFNVNPDLIXRLQ 794
            C IQ LNAL+P  ++ESE G  E W+ NN+  QCA VA+ R  + +  L  P+YTN P+  Y+ QG GI G++FPGC  T                   HQKV + REGD+IA+P G A W+YNN    +V V+++D  + +NQLDQ  R+FYL GN + +                           N+  GF    L EAF VN  ++  LQ
Sbjct:   28 CQIQKLNALKPDNRIESEGGFIETWNPNNKPFQCAGVALSRCTLNRNALRRPSYTNGPQEIYIQQGNGIFGMIFPGCPSTYQEPQESQQRGRSQRPQDRHQKVHRFREGDLIAVPTGVAWWMYNNEDTPVVAVSIIDTNSLENQLDQMPRRFYLAGNQEQEFLKYQQQQQGGSQSQKGKQQEEENEGSNILSGFAPEFLKEAFGVNMQIVRNLQ 241          
BLAST of CX047683 vs. ExPASy Swiss-Prot
Match: 12S2_ARATH (12S seed storage protein CRB OS=Arabidopsis thaliana GN=CRB PE=1 SV=2)

HSP 1 Score: 151.369 bits (381), Expect = 5.807e-36
Identity = 87/224 (38.84%), Postives = 115/224 (51.34%), Query Frame = 3
Query:  165 CNIQNLNALEPRQKVESEAGVTEFWDQNNEQLQCANVAVFRQRIQQRGLLVPAYTNTPEIFYVVQGRGIHGVVFPGCAET----XXXXXXXXXXXXXXXXXXHQKVRQLREGDVIALPAGAAHWIYNNGRDQLVLVALVDVGNSQNQLDQYFRKFYL-GGNPQPQLXXXXXXXXXXXXXXXXXXXXXXXNLFRGFDERLLAEAFNVNPDLIXRLQRPQIQRGII 821
            C +  LNALEP Q ++SE G  E WD +  QL+C+  A  R  I+ +GL +P + N  ++ +VV GRG+ G V PGCAET                      HQKV  LR GD IA P+G A W YNNG + L+LVA  D+ ++QNQLD+  R F + G NPQ Q                        N+F GF   +LA+AF +N +   +LQ  Q  RG I
Sbjct:   30 CQLDQLNALEPSQIIKSEGGRIEVWDHHAPQLRCSGFAFERFVIEPQGLFLPTFLNAGKLTFVVHGRGLMGRVIPGCAETFMESPVFGEGQGQGQSQGFRDMHQKVEHLRCGDTIATPSGVAQWFYNNGNEPLILVAAADLASNQNQLDRNLRPFLIAGNNPQGQ------------EWLQGRKQQKQNNIFNGFAPEILAQAFKINVETAQQLQNQQDNRGNI 241          
BLAST of CX047683 vs. ExPASy Swiss-Prot
Match: SSG1_AVESA (12S seed storage globulin 1 OS=Avena sativa PE=2 SV=1)

HSP 1 Score: 150.214 bits (378), Expect = 1.294e-35
Identity = 80/227 (35.24%), Postives = 118/227 (51.98%), Query Frame = 3
Query:  165 CNIQNLNALEPRQKVESEAGVTEFWDQNNEQLQCANVAVFRQRIQQRGLLVPAYTNTPEIFYVVQGRGIHGVVFPGCAET--------XXXXXXXXXXXXXXXXXXHQKVRQLREGDVIALPAGAAHWIYNNGRDQLVLVALVDVGNSQNQLDQYFRKFYLGGNPQPQLXXXXXXXXXXXXXXXXXXXXXXXNLFRGFDERLLAEAFNVNPDLIXRLQRPQIQRGII 821
            C    L A EP ++V S+AG+TE++D+ NEQ +CA V+V R+ I+ +GLL+P Y N P + Y++QGRG  G+ FPGC  T                          HQ+V  +++GDV+ALPAG  HW YN+G   +V V + DV N+ NQL+   ++F L GN + +                        N+F GF  +LL+EA  ++     ++Q    QRG I
Sbjct:   45 CKFDRLQAFEPLRQVRSQAGITEYFDEQNEQFRCAGVSVIRRVIEPQGLLLPQYHNAPGLVYILQGRGFTGLTFPGCPATFQQQFQQFDQARFAQGQSKSQNLKDEHQRVHHIKQGDVVALPAGIVHWCYNDGDAPIVAVYVFDVNNNANQLEPRQKEFLLAGNNKRE-------------------QQFGQNIFSGFSVQLLSEALGISQQAAQKIQSQNDQRGEI 252          
BLAST of CX047683 vs. ExPASy Swiss-Prot
Match: GLUA3_ORYSJ (Glutelin type-A 3 OS=Oryza sativa subsp. japonica GN=GLUA3 PE=2 SV=2)

HSP 1 Score: 150.214 bits (378), Expect = 1.294e-35
Identity = 86/227 (37.89%), Postives = 114/227 (50.22%), Query Frame = 3
Query:  165 CNIQNLNALEPRQKVESEAGVTEFWDQNNEQLQCANVAVFRQRIQQRGLLVPAYTNTPEIFYVVQGRGIHGVVFPGCAET--------XXXXXXXXXXXXXXXXXXHQKVRQLREGDVIALPAGAAHWIYNNGRDQLVLVALVDVGNSQNQLDQYFRKFYLGGNPQPQLXXXXXXXXXXXXXXXXXXXXXXXNLFRGFDERLLAEAFNVNPDLIXRLQRPQIQRGII 821
            C    L A EP + V S+AG TEF+D +NE  QC  V V R+ I+ RGLL+P Y+N   + YV+QGRGI G  FPGC ET                          HQK+ + ++GDV+ALPAG AHW YN+G   +V + + D+ NS NQLD   R F+L GN +                          N+F GF   LL+EA  ++  +  +LQ    QRG I
Sbjct:   45 CRFDRLQAFEPIRTVRSQAGTTEFFDVSNELFQCTGVFVVRRVIEPRGLLLPHYSNGATLVYVIQGRGITGPTFPGCPETYQQQFQQSEQDQQLEGQSQSHKFRDEHQKIHRFQQGDVVALPAGVAHWCYNDGDAPIVAIYVTDIYNSANQLDPRHRDFFLAGNNK-----------IGQQLYRYEARDNSKNVFGGFSVELLSEALGISSGVARQLQCQNDQRGEI 260          
BLAST of CX047683 vs. ExPASy Swiss-Prot
Match: SSG2_AVESA (12S seed storage globulin 2 OS=Avena sativa PE=3 SV=1)

HSP 1 Score: 148.673 bits (374), Expect = 3.764e-35
Identity = 79/227 (34.80%), Postives = 118/227 (51.98%), Query Frame = 3
Query:  165 CNIQNLNALEPRQKVESEAGVTEFWDQNNEQLQCANVAVFRQRIQQRGLLVPAYTNTPEIFYVVQGRGIHGVVFPGCAET--------XXXXXXXXXXXXXXXXXXHQKVRQLREGDVIALPAGAAHWIYNNGRDQLVLVALVDVGNSQNQLDQYFRKFYLGGNPQPQLXXXXXXXXXXXXXXXXXXXXXXXNLFRGFDERLLAEAFNVNPDLIXRLQRPQIQRGII 821
            C    L A EP ++V S+AG+ E++D+ NEQ +CA V+V R+ I+ +GLL+P Y N P + Y++QGRG  G+ FPGC  T                          HQ+V  +++GDV+ALPAG  HW YN+G   +V V + DV N+ NQL+   ++F L GN + +                        N+F GF  +LL+EA  ++  +  ++Q    QRG I
Sbjct:   45 CRFDRLQAFEPLRQVRSQAGIIEYFDEQNEQFRCAGVSVIRRVIEPQGLLLPQYHNAPGLVYILQGRGFTGLTFPGCPATFQQQFQPFDQAQFAEGQSQSQNLKDEHQRVHHIKQGDVVALPAGIVHWCYNDGDAPIVAVYVFDVNNNANQLEPRQKEFLLAGNNKRE-------------------QQFGQNIFSGFSVQLLSEALGISQQVAQKIQSQNDQRGEI 252          
The following BLAST results are available for this feature:
BLAST of CX047683 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 36
Match NameE-valueIdentityDescription
LEGA_PEA2.785e-3838.10Legumin A OS=Pisum sativum GN=LEGA PE=2 SV=1[more]
LEGJ_PEA1.058e-3734.18Legumin J OS=Pisum sativum GN=LEGJ PE=1 SV=1[more]
GLUA2_ORYSJ1.058e-3739.47Glutelin type-A 2 OS=Oryza sativa subsp. japonica ... [more]
LEGB4_VICFA2.358e-3734.60Legumin type B OS=Vicia faba GN=LEB4 PE=3 SV=1[more]
GLUA1_ORYSJ2.358e-3739.47Glutelin type-A 1 OS=Oryza sativa subsp. japonica ... [more]
GLYG2_SOYBN4.446e-3637.85Glycinin G2 OS=Glycine max GN=Gy2 PE=1 SV=2[more]
12S2_ARATH5.807e-3638.8412S seed storage protein CRB OS=Arabidopsis thalia... [more]
SSG1_AVESA1.294e-3535.2412S seed storage globulin 1 OS=Avena sativa PE=2 S... [more]
GLUA3_ORYSJ1.294e-3537.89Glutelin type-A 3 OS=Oryza sativa subsp. japonica ... [more]
SSG2_AVESA3.764e-3534.8012S seed storage globulin 2 OS=Avena sativa PE=3 S... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS09_15H07_g Ruby Orange Developing Seed cDNA Library UCRCS09 Citrus sinensis cDNA clone UCRCS09-15H07-P14-1-4.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX047683 ID=CX047683; Name=CX047683; organism=Citrus sinensis; type=EST; length=823bp
CAATTTTGGGCTTTTTTCTCAAAATGGCTTCTTCTTCTTTGCTCTGTTTT
GGCCTTTGCCTTCTAGTTCTCTTCAACGCCTGCTTTGCTCAAATAGAGCA
GGTAACAGACATAACTAGGGAAGGAAAGCAGCAAAGGCAACGGCAGCAAC
GCTTCCAAACCCAGTGCAATATCCAGAACCTCAACGCCCTTGAGCCCCGA
CAGAAGGTCGAATCCGAAGCTGGCGTCACAGAGTTCTGGGACCAGAACAA
TGAGCAATTACAGTGCGCCAATGTTGCCGTATTTCGCCAACGTATCCAGC
AGAGAGGGCTGCTCGTGCCTGCGTACACCAACACTCCTGAGATTTTCTAT
GTTGTTCAAGGTAGAGGCATTCATGGAGTTGTATTCCCCGGATGTGCTGA
GACTTTCCAAGATTCACAACAACAGCAGTCGTTCCAGGGCAGTAAATCCC
AAGATCAACACCAAAAGGTCAGACAACTACGTGAGGGTGATGTCATTGCA
TTGCCTGCTGGAGCAGCTCACTGGATTTACAACAATGGCCGGGACCAGCT
TGTTTTGGTCGCCCTCGTTGACGTTGGCAATTCTCAAAACCAGCTTGATC
AGTACTTCAGGAAATTCTACCTCGGTGGCAACCCACAACCACAACTCCAA
GGTTTCAGTCAAAGTCAAGGTGGCAGAAGTCAGGGAAGCCAAGGCAGCGA
CGACGGGAGAGGTGGCAATCTCTTTAGAGGCTTTGACGAGCGGTTGTTGG
CTGAAGCCTTCAACGTGAACCCAGATCTAATCANGAGACTGCAGAGGCCA
CAGATACAGAGGGGCATTATCAT
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