CX047672

Overview
NameCX047672
Unique NameCX047672
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length912
Libraries
Library NameType
Ruby Orange Developing Seed cDNA Library UCRCS09cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX047672 vs. ExPASy Swiss-Prot
Match: PHO85_DEBHA (Negative regulator of the PHO system OS=Debaryomyces hansenii GN=PHO85 PE=3 SV=2)

HSP 1 Score: 194.126 bits (492), Expect = 9.207e-49
Identity = 95/216 (43.98%), Postives = 141/216 (65.28%), Query Frame = -2
Query:  276 YLDTDLKKFIDSHRKGPNPRPLPPTLIQSFLYQLCKGVAHCHSHGVLHRDLKPQNXXXXXXXXXXXXXXLGLGRAFTVPLKSYTHEIVTLWYRAPEVLLGSTHYSTAVDMWSVGCIFAEMVRRQALFPGDSEFQQLLHIFRMLGTPTEKQWPGVSTL----RDWHVYPQWEPQNLPRAVPSLSPEGVDLLSLMLKYNPADRISAKAAMEHPYFDSL 911
            ++D DLKK++++H    N   L   +++SF++QL KG+  CH + VLHRDLKPQN               GL RAF +P  ++++E+VTLWYRAP+VLLGS  Y+ ++D+WS GCIFAEM   + LFPG S   QL+ IFR++GTP E+ WPGVS+      +W ++    PQ+L   +P+L   G++LLS +L+  P  RI+A+ A++HP+F  +
Sbjct:   85 FMDKDLKKYMEAHG---NQGALDLKIVKSFIFQLLKGIMFCHDNRVLHRDLKPQNLLINNKGELKLGDF-GLARAFGIPFNTFSNEVVTLWYRAPDVLLGSRAYTASIDIWSAGCIFAEMCTGKPLFPGTSNDDQLIKIFRLMGTPNERTWPGVSSYANFKNNWQIF---VPQDLRLLIPNLDSMGLNLLSSLLQMRPDARITARQALQHPWFHEI 293          
BLAST of CX047672 vs. ExPASy Swiss-Prot
Match: PHO85_CANAL (Negative regulator of the PHO system OS=Candida albicans GN=PHO85 PE=3 SV=1)

HSP 1 Score: 192.2 bits (487), Expect = 3.499e-48
Identity = 94/216 (43.52%), Postives = 139/216 (64.35%), Query Frame = -2
Query:  276 YLDTDLKKFIDSHRKGPNPRPLPPTLIQSFLYQLCKGVAHCHSHGVLHRDLKPQNXXXXXXXXXXXXXXLGLGRAFTVPLKSYTHEIVTLWYRAPEVLLGSTHYSTAVDMWSVGCIFAEMVRRQALFPGDSEFQQLLHIFRMLGTPTEKQWPGVSTL----RDWHVYPQWEPQNLPRAVPSLSPEGVDLLSLMLKYNPADRISAKAAMEHPYFDSL 911
            Y+D DLKK+++ H +      L   +++SF++QL KG+  CH + VLHRDLKPQN               GL RAF +P  ++++E+VTLWYRAP+VLLGS  Y+T++D+WS GCIFAEM   + LFPG +   QL+ IFR++GTP E+ WPG+S       +W ++    PQ+L   VP+L   G++LL  +L+  P  RI+A+ A++HP+F  +
Sbjct:   85 YMDKDLKKYMEVHGQ---QSALDLKVVKSFMFQLLKGIMFCHDNRVLHRDLKPQNLLINNKGELKLGDF-GLARAFGIPFNTFSNEVVTLWYRAPDVLLGSRAYTTSIDIWSAGCIFAEMCTGKPLFPGTANEDQLIKIFRLMGTPNERTWPGISQYTNYKNNWQIF---VPQDLRLIVPNLDSMGLNLLQSLLQMRPESRITARQALQHPWFHEI 293          
BLAST of CX047672 vs. ExPASy Swiss-Prot
Match: CDK18_PONAB (Cell division protein kinase 18 OS=Pongo abelii GN=CDK18 PE=2 SV=2)

HSP 1 Score: 192.2 bits (487), Expect = 3.499e-48
Identity = 99/214 (46.26%), Postives = 136/214 (63.55%), Query Frame = -2
Query:  276 YLDTDLKKFIDSHRKGPNPRPLPPTLIQSFLYQLCKGVAHCHSHGVLHRDLKPQNXXXXXXXXXXXXXXLGLGRAFTVPLKSYTHEIVTLWYRAPEVLLGSTHYSTAVDMWSVGCIFAEMVRRQALFPGDSEFQQLLHIFRMLGTPTEKQWPGVSTLRDWHVY--PQWEPQNLPRAVPSLSPEGVDLLSLMLKYNPADRISAKAAMEHPYFDSL 911
            YLD+DLK+++D      +        ++ F++QL +G+A+CH   +LHRDLKPQN               GL RA +VP K+Y++E+VTLWYR P+VLLGST YST +DMW VGCI  EM   + LFPG +  ++L  IFR+LGTPTE+ WPGV+   ++  Y  P++ PQ L    P L  +G+ LLS +L Y    R+SA+AA+ HPYF SL
Sbjct:  219 YLDSDLKQYLDHCGNLMSMHN-----VKIFMFQLLRGLAYCHHRKILHRDLKPQNLLINERGELKLADF-GLARAKSVPTKTYSNEVVTLWYRPPDVLLGSTEYSTPIDMWGVGCIHYEMATGRPLFPGSTVKEELHLIFRLLGTPTEETWPGVTAFSEFRTYSFPRYLPQPLISHAPRLDTDGIQLLSSLLLYESKSRMSAEAALSHPYFRSL 426          
BLAST of CX047672 vs. ExPASy Swiss-Prot
Match: PEF1_SCHPO (Serine/threonine-protein kinase pef1 OS=Schizosaccharomyces pombe GN=pef1 PE=2 SV=2)

HSP 1 Score: 191.045 bits (484), Expect = 7.794e-48
Identity = 94/210 (44.76%), Postives = 138/210 (65.71%), Query Frame = -2
Query:  285 YLDTDLKKFIDSHRKGPNPRPLPPTLIQSFLYQLCKGVAHCHSHGVLHRDLKPQNXXXXXXXXXXXXXXLGLGRAFTVPLKSYTHEIVTLWYRAPEVLLGSTHYSTAVDMWSVGCIFAEMVRRQALFPGDSEFQQLLHIFRMLGTPTEKQWPGVSTLRDWH-VYPQWEPQNLPRAVPSLSPEGVDLLSLMLKYNPADRISAKAAMEHPYF 911
            Y++ DLKK++D++    N   LPP+ +++F  QL KG++ CH + VLHRDLKPQN               GL R+  +P+ ++++E+VTLWYRAP+VLLGS  YST++D+WSVGCI AEM   + LF G +   QLL IFR+LGTPTE+ WPG+S L ++   +P ++ Q+L    P+  P G+DLL  ML+  P  R + + A++H +F
Sbjct:   80 YMEKDLKKYMDTYG---NQGALPPSQVKNFTQQLLKGISFCHENRVLHRDLKPQNLLINSRGELKLADF-GLARSIGIPVNTFSNEVVTLWYRAPDVLLGSRVYSTSIDIWSVGCIMAEMATGRPLFAGSNNEDQLLKIFRLLGTPTEQSWPGISLLPEYKPTFPIYKAQDLAYLFPTFDPLGLDLLRRMLRLQPELRTTGQDALQHAWF 285          
BLAST of CX047672 vs. ExPASy Swiss-Prot
Match: PHO85_YARLI (Negative regulator of the PHO system OS=Yarrowia lipolytica GN=PHO85 PE=3 SV=1)

HSP 1 Score: 190.274 bits (482), Expect = 1.329e-47
Identity = 93/210 (44.29%), Postives = 136/210 (64.76%), Query Frame = -2
Query:  285 YLDTDLKKFIDSHRKGPNPRPLPPTLIQSFLYQLCKGVAHCHSHGVLHRDLKPQNXXXXXXXXXXXXXXLGLGRAFTVPLKSYTHEIVTLWYRAPEVLLGSTHYSTAVDMWSVGCIFAEMVRRQALFPGDSEFQQLLHIFRMLGTPTEKQWPGVSTLRDWHV-YPQWEPQNLPRAVPSLSPEGVDLLSLMLKYNPADRISAKAAMEHPYF 911
            Y+D DLKKF+D++    N   L    ++ F+YQL +G+  CH + VLHRDLKPQN               GL RAF +P+ ++++E+VTLWYRAP+VLLGS  YST++D+WS GCI AEM   + LFPG S   QL HIF+++GTP E  WP +S+L ++   +  + PQ+L   +P +    +DLL  +L+  P +RI+A+ ++EHP+F
Sbjct:   84 YMDKDLKKFMDTNG---NKGALETKQVKWFMYQLLRGILFCHDNRVLHRDLKPQNLLINAKGQLKLADF-GLARAFGIPVNTFSNEVVTLWYRAPDVLLGSRTYSTSIDIWSAGCIMAEMFTGRPLFPGSSNDDQLQHIFKLMGTPNESTWPNISSLPNYRSNFQVYAPQDLRVIIPQIDNVALDLLLSLLQLKPENRITARQSLEHPWF 289          
BLAST of CX047672 vs. ExPASy Swiss-Prot
Match: CDK16_HUMAN (Cell division protein kinase 16 OS=Homo sapiens GN=CDK16 PE=1 SV=1)

HSP 1 Score: 189.889 bits (481), Expect = 1.736e-47
Identity = 98/214 (45.79%), Postives = 138/214 (64.49%), Query Frame = -2
Query:  276 YLDTDLKKFIDSHRKGPNPRPLPPTLIQSFLYQLCKGVAHCHSHGVLHRDLKPQNXXXXXXXXXXXXXXLGLGRAFTVPLKSYTHEIVTLWYRAPEVLLGSTHYSTAVDMWSVGCIFAEMVRRQALFPGDSEFQQLLHIFRMLGTPTEKQWPGVSTLRDW--HVYPQWEPQNLPRAVPSLSPEGVDLLSLMLKYNPADRISAKAAMEHPYFDSL 911
            YLD DLK+++D      N        ++ FL+QL +G+A+CH   VLHRDLKPQN               GL RA ++P K+Y++E+VTLWYR P++LLGST YST +DMW VGCIF EM   + LFPG +  +QL  IFR+LGTPTE+ WPG+ +  ++  + YP++  + L    P L  +G DLL+ +L++   +RISA+ AM+HP+F SL
Sbjct:  242 YLDKDLKQYLDDCGNIINMHN-----VKLFLFQLLRGLAYCHRQKVLHRDLKPQNLLINERGELKLADF-GLARAKSIPTKTYSNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMATGRPLFPGSTVEEQLHFIFRILGTPTEETWPGILSNEEFKTYNYPKYRAEALLSHAPRLDSDGADLLTKLLQFEGRNRISAEDAMKHPFFLSL 449          
BLAST of CX047672 vs. ExPASy Swiss-Prot
Match: CDK17_HUMAN (Cell division protein kinase 17 OS=Homo sapiens GN=CDK17 PE=1 SV=2)

HSP 1 Score: 188.734 bits (478), Expect = 3.868e-47
Identity = 97/214 (45.33%), Postives = 137/214 (64.02%), Query Frame = -2
Query:  276 YLDTDLKKFIDSHRKGPNPRPLPPTLIQSFLYQLCKGVAHCHSHGVLHRDLKPQNXXXXXXXXXXXXXXLGLGRAFTVPLKSYTHEIVTLWYRAPEVLLGSTHYSTAVDMWSVGCIFAEMVRRQALFPGDSEFQQLLHIFRMLGTPTEKQWPGVSTLRDWHVY--PQWEPQNLPRAVPSLSPEGVDLLSLMLKYNPADRISAKAAMEHPYFDSL 911
            YLD DLK+++D      +        ++ FLYQ+ +G+A+CH   VLHRDLKPQN               GL RA +VP K+Y++E+VTLWYR P+VLLGS+ YST +DMW VGCIF EM   + LFPG +   +L  IFR+LGTP+++ WPG+S+  ++  Y  P+++PQ L    P L  EG++L++  L+Y    R+SA+ AM+H YF SL
Sbjct:  269 YLDKDLKQYMDDCGNIMSMHN-----VKLFLYQILRGLAYCHRRKVLHRDLKPQNLLINEKGELKLADF-GLARAKSVPTKTYSNEVVTLWYRPPDVLLGSSEYSTQIDMWGVGCIFFEMASGRPLFPGSTVEDELHLIFRLLGTPSQETWPGISSNEEFKNYNFPKYKPQPLINHAPRLDSEGIELITKFLQYESKKRVSAEEAMKHVYFRSL 476          
BLAST of CX047672 vs. ExPASy Swiss-Prot
Match: CC2H1_TRYCO (Cell division control protein 2 homolog 1 OS=Trypanosoma congolense GN=CRK1 PE=3 SV=1)

HSP 1 Score: 188.734 bits (478), Expect = 3.868e-47
Identity = 104/222 (46.85%), Postives = 133/222 (59.91%), Query Frame = -2
Query:  285 YLDTDLKKFIDSHRKGPNPRPLPPTLIQSFLYQLCKGVAHCHSHGVLHRDLKPQNXXXXXXXXXXXXXXLGLGRAFTVPLKSYTHEIVTLWYRAPEVLLGSTHYSTAVDMWSVGCIFAEMVRRQALFPGDSEFQQLLHIFRMLGTPTEKQWPGVS---TLRDWHVYPQWEPQNL----------PRAVPSLSPEGVDLLSLMLKYNPADRISAKAAMEHPYF 911
            Y++ DLKK++D  R   N   L P  IQ F+  L KGV  CH   VLHRDLKP N               GLGRAF +P+K YTHE+VTLWYR+P+VLLGST Y T VD+WSVGCIFAEM     LF G ++  QLL IFR LGTP+ + WP ++      +    P+++ QNL            A   L P+G+DLL  +L+Y P +R++A  A+EHPYF
Sbjct:   83 YMEMDLKKYMD--RASGN---LDPATIQEFMRSLLKGVRFCHERNVLHRDLKPPNLLISREKELKLADF-GLGRAFGIPVKKYTHEVVTLWYRSPDVLLGSTQYGTPVDIWSVGCIFAEMAIGAPLFAGKNDADQLLRIFRFLGTPSSQVWPSMNLYPNSTNMLSKPEFQ-QNLIATCDEQFQTHPAYAKLGPQGIDLLRRLLRYEPGERLTAAQALEHPYF 297          
BLAST of CX047672 vs. ExPASy Swiss-Prot
Match: CDK16_MOUSE (Cell division protein kinase 16 OS=Mus musculus GN=Cdk16 PE=1 SV=1)

HSP 1 Score: 188.348 bits (477), Expect = 5.052e-47
Identity = 97/214 (45.33%), Postives = 136/214 (63.55%), Query Frame = -2
Query:  276 YLDTDLKKFIDSHRKGPNPRPLPPTLIQSFLYQLCKGVAHCHSHGVLHRDLKPQNXXXXXXXXXXXXXXLGLGRAFTVPLKSYTHEIVTLWYRAPEVLLGSTHYSTAVDMWSVGCIFAEMVRRQALFPGDSEFQQLLHIFRMLGTPTEKQWPGVSTLRDWHV--YPQWEPQNLPRAVPSLSPEGVDLLSLMLKYNPADRISAKAAMEHPYFDSL 911
            YLD DLK+++D      N        ++ FL+QL +G+A+CH   VLHRDLKPQN               GL RA ++P K+Y++E+VTLWYR P++LLGST YST +DMW VGCIF EM   + LFPG +  +QL  IFR+LGTPTE+ WPG+ +  ++    YP++  + L    P L  +G DLL+ +L++   +RISA+ A +HP+F SL
Sbjct:  242 YLDKDLKQYLDDCGNVINMHN-----VKLFLFQLLRGLAYCHRQKVLHRDLKPQNLLINERGELKLADF-GLARAKSIPTKTYSNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMATGRPLFPGSTVEEQLHFIFRILGTPTEETWPGILSNEEFRTYNYPKYRAEALLSHAPRLDSDGADLLTKLLQFEGRNRISAEDARKHPFFLSL 449          
BLAST of CX047672 vs. ExPASy Swiss-Prot
Match: CDK5_GLOMM (Cell division protein kinase 5 homolog OS=Glossina morsitans morsitans GN=Cdk5 PE=2 SV=1)

HSP 1 Score: 187.963 bits (476), Expect = 6.598e-47
Identity = 99/211 (46.92%), Postives = 131/211 (62.09%), Query Frame = -2
Query:  285 YLDTDLKKFIDSHRKGPNPRPLPPTLIQSFLYQLCKGVAHCHSHGVLHRDLKPQNXXXXXXXXXXXXXXLGLGRAFTVPLKSYTHEIVTLWYRAPEVLLGSTHYSTAVDMWSVGCIFAEMV-RRQALFPGDSEFQQLLHIFRMLGTPTEKQWPGVSTLRDWHVYPQWEP-QNLPRAVPSLSPEGVDLLSLMLKYNPADRISAKAAMEHPYF 911
            + D DLKK+ DS         +   + +SF+ QL +G+A CHSH VLHRDLKPQN               GL RAF +P+K Y+ E+VTLWYR P+VL G+  Y+T++DMWS GCIFAE+    + LFPG     QL+ IFR+LGTPTE+ WPGV+ L D+   P +    +  + VP LS +G DLL  +L   P  R+SA+ AM+HPYF
Sbjct:   82 HCDQDLKKYFDSLNGD-----IDMAVCRSFMLQLLRGLAFCHSHNVLHRDLKPQNLLINKNGELKLADF-GLARAFGIPVKCYSAEVVTLWYRPPDVLFGAKLYTTSIDMWSAGCIFAELADAGRPLFPGSDVLDQLMKIFRVLGTPTEESWPGVTHLSDYVALPHFPAITSWSQIVPRLSSKGRDLLQKLLVCRPNQRVSAEQAMQHPYF 286          
The following BLAST results are available for this feature:
BLAST of CX047672 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
PHO85_DEBHA9.207e-4943.98Negative regulator of the PHO system OS=Debaryomyc... [more]
PHO85_CANAL3.499e-4843.52Negative regulator of the PHO system OS=Candida al... [more]
CDK18_PONAB3.499e-4846.26Cell division protein kinase 18 OS=Pongo abelii GN... [more]
PEF1_SCHPO7.794e-4844.76Serine/threonine-protein kinase pef1 OS=Schizosacc... [more]
PHO85_YARLI1.329e-4744.29Negative regulator of the PHO system OS=Yarrowia l... [more]
CDK16_HUMAN1.736e-4745.79Cell division protein kinase 16 OS=Homo sapiens GN... [more]
CDK17_HUMAN3.868e-4745.33Cell division protein kinase 17 OS=Homo sapiens GN... [more]
CC2H1_TRYCO3.868e-4746.85Cell division control protein 2 homolog 1 OS=Trypa... [more]
CDK16_MOUSE5.052e-4745.33Cell division protein kinase 16 OS=Mus musculus GN... [more]
CDK5_GLOMM6.598e-4746.92Cell division protein kinase 5 homolog OS=Glossina... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS09_15G11_b Ruby Orange Developing Seed cDNA Library UCRCS09 Citrus sinensis cDNA clone UCRCS09-15G11-N22-1-6.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX047672 ID=CX047672; Name=CX047672; organism=Citrus sinensis; type=EST; length=912bp
AATGACATAAAAGAAAGATTGTAGAAATTGAAAACGATCATATTACAAAG
TTCAGAACTTCAGATGGTGAAATCACCAAGATGATGACAACTAACATGAC
ATACGGACTTGACAGAATTATGTTTAAGAGTTTAAAACAAGTCACCCCTT
CTATAACTTCAATACAAGAAAATGAATTCCTACAACAAACTGTATCACAA
CCGAAGAACTGAAGAAAGAGAAGTAGAATTTCACATAAGCAGCAGGGTAC
TGCAACTTCAGTATTGAGACTTGTCAAGGCTGTCAAAATAGGGATGTTCC
ATAGCTGCTTTCGCTGAAATTCTGTCTGCTGGATTGTATTTCAGCATTAA
CGACAGAAGATCAACTCCCTCAGGACTCAGAGATGGAACAGCACGTGGCA
AGTTCTGCGGCTCCCACTGTGGATACACATGCCAGTCCCTCAGAGTAGAA
ACACCTGGCCACTGTTTCTCAGTTGGTGTTCCCAGCATCCTGAAAATATG
AAGCAATTGCTGGAACTCAGAGTCACCAGGGAACAAAGCCTGCCTTCTAA
CCATCTCAGCGAAAATGCAACCAACGGACCACATGTCGACAGCAGTGGAG
TAATGAGTGGAACCAAGAAGCACCTCGGGAGCCCTATACCAGAGAGTAAC
AATCTCGTGGGTATAGCTTTTGAGAGGAACGGTGAAGGCGCGTCCGAGGC
CAAGATCGGCGATCTTGAGAATCCCCTTGTCCTTATCAAGGAGAAGATTC
TGCGGCTTCAGGTCGCGATGAAGGACACCGTGGCTGTGGCAGTGGGCGAC
GCCTTTGCAAAGCTGGTACAAGAAGCTCTGAATGAGAGTGGGGGGCAGCG
GCCTCGGATTGGGGCCCTTGCGGTGCGAGTCGATGAATTTCTTTAGATCG
GTATCGAGGTAT
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