CX047671

Overview
NameCX047671
Unique NameCX047671
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length844
Libraries
Library NameType
Ruby Orange Developing Seed cDNA Library UCRCS09cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX047671 vs. ExPASy Swiss-Prot
Match: CDC2H_PLAYO (Cell division control protein 2 homolog OS=Plasmodium yoelii yoelii GN=CRK2 PE=3 SV=1)

HSP 1 Score: 216.468 bits (550), Expect = 1.529e-55
Identity = 125/251 (49.80%), Postives = 155/251 (61.75%), Query Frame = 2
Query:   95 MEKYEKLEKVGEGTYGKVYKAKDKATGQLVALKKTRLEMDEEGIPPT-ALREVSLLQMLSQSLYVVRLLCVEHVDSSLKSNNPSPDSASAFATSNNGKSNLYLVFEYLDTDLKKFIDSHRKGPNPRPLPPTLIQSFLYQLCKGVAHCHSHGVLHRDLKPQNXXXXXXXXXXXXXXXGLGRAFTVPLKSYTHEIVTLWYRAPEVLLGSTHYSTAVDMWSVGCIFAEMVRRQALFPGDSEFQQLLHIFRMLGT 844
            MEKY  LEK+GEGTYG VYKA++ + G+  ALKK RLE ++EGIP T ++RE+S+L+ L  S  +V+L  V H                        K  L LVFE+LD DLKK ID    G     L     +SFL QL  G+A+CH H VLHRDLKPQN               GL RAF +P + YTHE+VTLWYRAP++L+GS  YST +D+WSVGCIFAEMV  + LFPG SE  QL+ IF++LGT
Sbjct:    1 MEKYHGLEKIGEGTYGVVYKAQN-SDGESFALKKIRLEKEDEGIPSTVSIREISILKELRHS-NIVKLYDVIHA-----------------------KKRLILVFEHLDQDLKKLIDVCDGG-----LESVTAKSFLLQLLNGIAYCHEHRVLHRDLKPQNLLINREGELKIADF-GLARAFGIPARRYTHEVVTLWYRAPDILMGSKKYSTPIDIWSVGCIFAEMVNGRPLFPGVSETDQLMRIFKILGT 220          
BLAST of CX047671 vs. ExPASy Swiss-Prot
Match: CDC2B_ANTMA (Cell division control protein 2 homolog B (Fragment) OS=Antirrhinum majus GN=CDC2B PE=2 SV=1)

HSP 1 Score: 216.468 bits (550), Expect = 1.529e-55
Identity = 117/236 (49.58%), Postives = 149/236 (63.14%), Query Frame = 2
Query:  137 YGKVYKAKDKATGQLVALKKTRLEMDEEGIPPTALREVSLLQMLSQSLYVVRLLCVEHVDSSLKSNNPSPDSASAFATSNNGKSNLYLVFEYLDTDLKKFIDSHRKGPNPRPLPPTLIQSFLYQLCKGVAHCHSHGVLHRDLKPQNXXXXXXXXXXXXXXXGLGRAFTVPLKSYTHEIVTLWYRAPEVLLGSTHYSTAVDMWSVGCIFAEMVRRQALFPGDSEFQQLLHIFRMLGT 844
            YG VYKA+D  T + +ALKK RLE ++EG+P TA+RE+SLL+ +     +V L  V H +                         LYLVFEYLD DLKK +DS  +      +    ++ FL Q+ +GVA+CHSH VLHRDLKPQN               GL RAF +P++++THE+VTLWYRAPEVLLGS HYST VD+WSVGCIFAEMV ++ LFPGDSE  +L  IFR++GT
Sbjct:    2 YGVVYKARDIETNEDIALKKIRLEQEDEGVPSTAIREISLLKEMHHE-NIVNLKDVVHREK-----------------------RLYLVFEYLDLDLKKHMDSCPEFSQDLHM----VKMFLCQILRGVAYCHSHRVLHRDLKPQNLLIDRGSNTIKLADFGLARAFGIPVRTFTHEVVTLWYRAPEVLLGSRHYSTPVDVWSVGCIFAEMVNQKPLFPGDSEIDELHKIFRIIGT 209          
BLAST of CX047671 vs. ExPASy Swiss-Prot
Match: CC2H1_TRYCO (Cell division control protein 2 homolog 1 OS=Trypanosoma congolense GN=CRK1 PE=3 SV=1)

HSP 1 Score: 216.083 bits (549), Expect = 1.996e-55
Identity = 122/248 (49.19%), Postives = 152/248 (61.29%), Query Frame = 2
Query:  101 KYEKLEKVGEGTYGKVYKAKDKATGQLVALKKTRLEMDEEGIPPTALREVSLLQMLSQSLYVVRLLCVEHVDSSLKSNNPSPDSASAFATSNNGKSNLYLVFEYLDTDLKKFIDSHRKGPNPRPLPPTLIQSFLYQLCKGVAHCHSHGVLHRDLKPQNXXXXXXXXXXXXXXXGLGRAFTVPLKSYTHEIVTLWYRAPEVLLGSTHYSTAVDMWSVGCIFAEMVRRQALFPGDSEFQQLLHIFRMLGT 844
            +Y++LEK+GEG+YG VY+A+D  T  +VALK+ RLE  EEG+P TA+RE+S+L+ L     +VRLL V H ++ L                        LVFEY++ DLKK++D  R   N   L P  IQ F+  L KGV  CH   VLHRDLKP N               GLGRAF +P+K YTHE+VTLWYR+P+VLLGST Y T VD+WSVGCIFAEM     LF G ++  QLL IFR LGT
Sbjct:    4 RYQRLEKIGEGSYGVVYRARDITTDVIVALKRIRLESVEEGVPCTAIREISILKELRHE-NIVRLLDVCHSENRLN-----------------------LVFEYMEMDLKKYMD--RASGN---LDPATIQEFMRSLLKGVRFCHERNVLHRDLKPPNLLISREKELKLADF-GLGRAFGIPVKKYTHEVVTLWYRSPDVLLGSTQYGTPVDIWSVGCIFAEMAIGAPLFAGKNDADQLLRIFRFLGT 221          
BLAST of CX047671 vs. ExPASy Swiss-Prot
Match: CDK5_XENLA (Cell division protein kinase 5 OS=Xenopus laevis GN=cdk5 PE=2 SV=1)

HSP 1 Score: 215.698 bits (548), Expect = 2.607e-55
Identity = 120/251 (47.81%), Postives = 155/251 (61.75%), Query Frame = 2
Query:   95 MEKYEKLEKVGEGTYGKVYKAKDKATGQLVALKKTRLEMDEEGIPPTALREVSLLQMLSQSLYVVRLLCVEHVDSSLKSNNPSPDSASAFATSNNGKSNLYLVFEYLDTDLKKFIDSHRKGPNPRPLPPTLIQSFLYQLCKGVAHCHSHGVLHRDLKPQNXXXXXXXXXXXXXXXGLGRAFTVPLKSYTHEIVTLWYRAPEVLLGSTHYSTAVDMWSVGCIFAEMVRR-QALFPGDSEFQQLLHIFRMLGT 844
            M+KYEKLEK+GEGTYG V+KAK++ T ++VALK+ RL+ D+EG+P +ALRE+ LL+ L     +VRL  V H D  L                        LVFE+ D DLKK+ DS         L P +++SF+YQL KG+A CHS  VLHRDLKPQN               GL RAF +P++ Y+ E+VTLWYR P+VL G+  YST++DMWS GCIFAE+    + LFPG+    QL  IFR+LGT
Sbjct:    1 MQKYEKLEKIGEGTYGTVFKAKNRDTHEIVALKRVRLDDDDEGVPSSALREICLLKELKHK-NIVRLHDVLHSDKKLT-----------------------LVFEFCDQDLKKYFDSCN-----GDLDPEIVKSFMYQLLKGLAFCHSRNVLHRDLKPQN-LLINRNGELKLADFGLARAFGIPVRCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGT 221          
BLAST of CX047671 vs. ExPASy Swiss-Prot
Match: CDK5_MOUSE (Cell division protein kinase 5 OS=Mus musculus GN=Cdk5 PE=1 SV=1)

HSP 1 Score: 213.772 bits (543), Expect = 9.908e-55
Identity = 119/251 (47.41%), Postives = 154/251 (61.35%), Query Frame = 2
Query:   95 MEKYEKLEKVGEGTYGKVYKAKDKATGQLVALKKTRLEMDEEGIPPTALREVSLLQMLSQSLYVVRLLCVEHVDSSLKSNNPSPDSASAFATSNNGKSNLYLVFEYLDTDLKKFIDSHRKGPNPRPLPPTLIQSFLYQLCKGVAHCHSHGVLHRDLKPQNXXXXXXXXXXXXXXXGLGRAFTVPLKSYTHEIVTLWYRAPEVLLGSTHYSTAVDMWSVGCIFAEMVRR-QALFPGDSEFQQLLHIFRMLGT 844
            M+KYEKLEK+GEGTYG V+KAK++ T ++VALK+ RL+ D+EG+P +ALRE+ LL+ L     +VRL  V H D  L                        LVFE+ D DLKK+ DS         L P +++SFL+QL KG+  CHS  VLHRDLKPQN               GL RAF +P++ Y+ E+VTLWYR P+VL G+  YST++DMWS GCIFAE+    + LFPG+    QL  IFR+LGT
Sbjct:    1 MQKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHK-NIVRLHDVLHSDKKLT-----------------------LVFEFCDQDLKKYFDSCN-----GDLDPEIVKSFLFQLLKGLGFCHSRNVLHRDLKPQN-LLINRNGELKLADFGLARAFGIPVRCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGT 221          
BLAST of CX047671 vs. ExPASy Swiss-Prot
Match: CDK5_HUMAN (Cell division protein kinase 5 OS=Homo sapiens GN=CDK5 PE=1 SV=3)

HSP 1 Score: 213.772 bits (543), Expect = 9.908e-55
Identity = 119/251 (47.41%), Postives = 154/251 (61.35%), Query Frame = 2
Query:   95 MEKYEKLEKVGEGTYGKVYKAKDKATGQLVALKKTRLEMDEEGIPPTALREVSLLQMLSQSLYVVRLLCVEHVDSSLKSNNPSPDSASAFATSNNGKSNLYLVFEYLDTDLKKFIDSHRKGPNPRPLPPTLIQSFLYQLCKGVAHCHSHGVLHRDLKPQNXXXXXXXXXXXXXXXGLGRAFTVPLKSYTHEIVTLWYRAPEVLLGSTHYSTAVDMWSVGCIFAEMVRR-QALFPGDSEFQQLLHIFRMLGT 844
            M+KYEKLEK+GEGTYG V+KAK++ T ++VALK+ RL+ D+EG+P +ALRE+ LL+ L     +VRL  V H D  L                        LVFE+ D DLKK+ DS         L P +++SFL+QL KG+  CHS  VLHRDLKPQN               GL RAF +P++ Y+ E+VTLWYR P+VL G+  YST++DMWS GCIFAE+    + LFPG+    QL  IFR+LGT
Sbjct:    1 MQKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHK-NIVRLHDVLHSDKKLT-----------------------LVFEFCDQDLKKYFDSCN-----GDLDPEIVKSFLFQLLKGLGFCHSRNVLHRDLKPQN-LLINRNGELKLADFGLARAFGIPVRCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGT 221          
BLAST of CX047671 vs. ExPASy Swiss-Prot
Match: CDK5_BOVIN (Cell division protein kinase 5 OS=Bos taurus GN=CDK5 PE=1 SV=2)

HSP 1 Score: 213.772 bits (543), Expect = 9.908e-55
Identity = 119/251 (47.41%), Postives = 154/251 (61.35%), Query Frame = 2
Query:   95 MEKYEKLEKVGEGTYGKVYKAKDKATGQLVALKKTRLEMDEEGIPPTALREVSLLQMLSQSLYVVRLLCVEHVDSSLKSNNPSPDSASAFATSNNGKSNLYLVFEYLDTDLKKFIDSHRKGPNPRPLPPTLIQSFLYQLCKGVAHCHSHGVLHRDLKPQNXXXXXXXXXXXXXXXGLGRAFTVPLKSYTHEIVTLWYRAPEVLLGSTHYSTAVDMWSVGCIFAEMVRR-QALFPGDSEFQQLLHIFRMLGT 844
            M+KYEKLEK+GEGTYG V+KAK++ T ++VALK+ RL+ D+EG+P +ALRE+ LL+ L     +VRL  V H D  L                        LVFE+ D DLKK+ DS         L P +++SFL+QL KG+  CHS  VLHRDLKPQN               GL RAF +P++ Y+ E+VTLWYR P+VL G+  YST++DMWS GCIFAE+    + LFPG+    QL  IFR+LGT
Sbjct:    1 MQKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHK-NIVRLHDVLHSDKKLT-----------------------LVFEFCDQDLKKYFDSCN-----GDLDPEIVKSFLFQLLKGLGFCHSRNVLHRDLKPQN-LLINRNGELKLADFGLARAFGIPVRCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGT 221          
BLAST of CX047671 vs. ExPASy Swiss-Prot
Match: CDK5_RAT (Cell division protein kinase 5 OS=Rattus norvegicus GN=Cdk5 PE=1 SV=1)

HSP 1 Score: 211.46 bits (537), Expect = 4.917e-54
Identity = 118/251 (47.01%), Postives = 153/251 (60.96%), Query Frame = 2
Query:   95 MEKYEKLEKVGEGTYGKVYKAKDKATGQLVALKKTRLEMDEEGIPPTALREVSLLQMLSQSLYVVRLLCVEHVDSSLKSNNPSPDSASAFATSNNGKSNLYLVFEYLDTDLKKFIDSHRKGPNPRPLPPTLIQSFLYQLCKGVAHCHSHGVLHRDLKPQNXXXXXXXXXXXXXXXGLGRAFTVPLKSYTHEIVTLWYRAPEVLLGSTHYSTAVDMWSVGCIFAEMVRR-QALFPGDSEFQQLLHIFRMLGT 844
            M+KYEKLEK+GEGTYG V+KAK++ T ++VALK+ RL+ D+EG+P +ALRE+ LL+ L     +VRL  V H D  L                        LVFE+ D DLKK+ DS         L P +++S L+QL KG+  CHS  VLHRDLKPQN               GL RAF +P++ Y+ E+VTLWYR P+VL G+  YST++DMWS GCIFAE+    + LFPG+    QL  IFR+LGT
Sbjct:    1 MQKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHK-NIVRLHDVLHSDKKLT-----------------------LVFEFCDQDLKKYFDSCN-----GDLDPEIVKSLLFQLLKGLGFCHSRNVLHRDLKPQN-LLINRNGELKLADFGLARAFGIPVRCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGT 221          
BLAST of CX047671 vs. ExPASy Swiss-Prot
Match: CDC2_CAEBR (Cell division control protein 2 homolog OS=Caenorhabditis briggsae GN=cdk-1 PE=3 SV=1)

HSP 1 Score: 208.379 bits (529), Expect = 4.163e-53
Identity = 108/250 (43.20%), Postives = 151/250 (60.40%), Query Frame = 2
Query:   95 MEKYEKLEKVGEGTYGKVYKAKDKATGQLVALKKTRLEMDEEGIPPTALREVSLLQMLSQSLYVVRLLCVEHVDSSLKSNNPSPDSASAFATSNNGKSNLYLVFEYLDTDLKKFIDSHRKGPNPRPLPPTLIQSFLYQLCKGVAHCHSHGVLHRDLKPQNXXXXXXXXXXXXXXXGLGRAFTVPLKSYTHEIVTLWYRAPEVLLGSTHYSTAVDMWSVGCIFAEMVRRQALFPGDSEFQQLLHIFRMLGT 844
            ++ + KLEK+GEGTYG VYK +++ T  +VA+KK RLE ++EG+P TA+RE+SLL+ L                      +P+     A     N    LYL+FE+L  DLK+++D+  K      LP   ++S+ +Q+ + +  CH   V+HRDLKPQN               GL RA  +P++ YTHE+VTLWYRAPE+L+G+  YS  VDMWS+GCIFAEM  ++ LF GDSE  +L  IFR+LGT
Sbjct:   13 LDDFTKLEKIGEGTYGVVYKGRNRRTQAMVAMKKIRLESEDEGVPSTAVREISLLKELQ---------------------HPNVVGLEAVIMQEN---RLYLIFEFLSYDLKRYMDTLSK---EEYLPSETLKSYTFQILQAMCFCHQRRVIHRDLKPQNLLVDEKGAIKLADF-GLARAIGIPIRVYTHEVVTLWYRAPEILMGAQRYSMGVDMWSIGCIFAEMATKKPLFQGDSEIDELFRIFRILGT 234          
BLAST of CX047671 vs. ExPASy Swiss-Prot
Match: CRK1_LEIME (Cell division protein kinase 2 homolog CRK1 OS=Leishmania mexicana GN=CRK1 PE=2 SV=1)

HSP 1 Score: 207.994 bits (528), Expect = 5.436e-53
Identity = 116/248 (46.77%), Postives = 150/248 (60.48%), Query Frame = 2
Query:  101 KYEKLEKVGEGTYGKVYKAKDKATGQLVALKKTRLEMDEEGIPPTALREVSLLQMLSQSLYVVRLLCVEHVDSSLKSNNPSPDSASAFATSNNGKSNLYLVFEYLDTDLKKFIDSHRKGPNPRPLPPTLIQSFLYQLCKGVAHCHSHGVLHRDLKPQNXXXXXXXXXXXXXXXGLGRAFTVPLKSYTHEIVTLWYRAPEVLLGSTHYSTAVDMWSVGCIFAEMVRRQALFPGDSEFQQLLHIFRMLGT 844
            +YE+ EK+GEGTYG VYKA+D +T   VALK+ RL+ +EEG+P TA+RE+SLL+ L     +V+LL V H                        +  L +VFEYLD DLKK++D  R+  N   L    IQ F+  L +GVA CH   VLHRDLKPQN               GLGR+F +P++ +T+E+VTLWYR P+VLLGS  Y   VD+WSVGCIF+EM     LF G ++  QL+ IFR LGT
Sbjct:    4 RYERQEKIGEGTYGVVYKARDTSTAATVALKRIRLDSEEEGVPCTAIREISLLKELRHE-NIVKLLDVCH-----------------------SEHRLTIVFEYLDLDLKKYLD--RENGN---LDAATIQHFMRDLLRGVAFCHQRSVLHRDLKPQNLLISREKELKLGDF-GLGRSFAIPVRKFTNEVVTLWYRPPDVLLGSMQYGPPVDVWSVGCIFSEMATGTPLFAGKNDADQLMRIFRFLGT 221          
The following BLAST results are available for this feature:
BLAST of CX047671 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
CDC2H_PLAYO1.529e-5549.80Cell division control protein 2 homolog OS=Plasmod... [more]
CDC2B_ANTMA1.529e-5549.58Cell division control protein 2 homolog B (Fragmen... [more]
CC2H1_TRYCO1.996e-5549.19Cell division control protein 2 homolog 1 OS=Trypa... [more]
CDK5_XENLA2.607e-5547.81Cell division protein kinase 5 OS=Xenopus laevis G... [more]
CDK5_MOUSE9.908e-5547.41Cell division protein kinase 5 OS=Mus musculus GN=... [more]
CDK5_HUMAN9.908e-5547.41Cell division protein kinase 5 OS=Homo sapiens GN=... [more]
CDK5_BOVIN9.908e-5547.41Cell division protein kinase 5 OS=Bos taurus GN=CD... [more]
CDK5_RAT4.917e-5447.01Cell division protein kinase 5 OS=Rattus norvegicu... [more]
CDC2_CAEBR4.163e-5343.20Cell division control protein 2 homolog OS=Caenorh... [more]
CRK1_LEIME5.436e-5346.77Cell division protein kinase 2 homolog CRK1 OS=Lei... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS09_15G11_g Ruby Orange Developing Seed cDNA Library UCRCS09 Citrus sinensis cDNA clone UCRCS09-15G11-N22-1-5.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX047671 ID=CX047671; Name=CX047671; organism=Citrus sinensis; type=EST; length=844bp
CCTCGTGCCGCCGCTCTCCTTTAATAAACGAATGAAGGGGAGGCGGTGCC
ACTGAAATTCAAAATTCTAGGGTTCGCAGAGCAGAACAGAGAGGATGGAG
AAGTACGAGAAGCTAGAGAAGGTGGGAGAAGGAACGTACGGGAAAGTGTA
CAAGGCAAAGGACAAAGCGACCGGGCAGTTGGTTGCTCTGAAGAAAACAA
GACTCGAAATGGACGAAGAAGGCATCCCCCCGACCGCTCTCCGCGAAGTG
TCCCTCCTCCAGATGCTCTCTCAATCCCTTTACGTCGTCCGCCTCCTCTG
CGTCGAACACGTGGACTCCTCTCTCAAATCCAACAACCCCAGCCCCGACT
CCGCTTCCGCCTTCGCCACCTCCAACAACGGCAAGTCTAATCTCTATCTC
GTGTTTGAATACCTCGATACCGATCTAAAGAAATTCATCGACTCGCACCG
CAAGGGCCCCAATCCGAGGCCGCTGCCCCCCACTCTCATTCAGAGCTTCT
TGTACCAGCTTTGCAAAGGCGTCGCCCACTGCCACAGCCACGGTGTCCTT
CATCGCGACCTGAAGCCGCAGAATCTTCTCCTTGATAAGGACAAGGGGAT
TCTCAAGATCGCCGATCTTGGCCTCGGACGCGCCTTCACCGTTCCTCTCA
AAAGCTATACCCACGAGATTGTTACTCTCTGGTATAGGGCTCCCGAGGTG
CTTCTTGGTTCCACTCATTACTCCACTGCTGTCGACATGTGGTCCGTTGG
TTGCATTTTCGCTGAGATGGTTAGAAGGCAGGCTTTGTTCCCTGGTGACT
CTGAGTTCCAGCAATTGCTTCATATTTTCAGGATGCTGGGAACA
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