CX047648

Overview
NameCX047648
Unique NameCX047648
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length779
Libraries
Library NameType
Ruby Orange Developing Seed cDNA Library UCRCS09cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX047648 vs. ExPASy Swiss-Prot
Match: INO1_RAT (Inositol-3-phosphate synthase 1 OS=Rattus norvegicus GN=Isyna1 PE=2 SV=2)

HSP 1 Score: 229.18 bits (583), Expect = 1.997e-59
Identity = 107/163 (65.64%), Postives = 132/163 (80.98%), Query Frame = -2
Query:  290 APQTFRSKEISKSNVVDDMVSSNGILYGPGEHPDHVVVIKYVPYVGDSKRAMDEYTSEIFMGGKNTIVLHNTCEDFFLAAPIVLDLVLLAEFSTRIQLKAEGEGKFHSFHPVATIFSYLTKVPLVPPGTPVVNALWKQRAMLENILRACVGLAPENNMILEYK 778
            AP  FRSKE++KS+VVDDMV SN +LY PGE PDH VVIKYVPYVGDSKRA+DEYTSE+ +GG NT+VLHNTCED  LAAPI+LDLVLL E   R+    + + +   FHPV ++ S+L K PLVPPG+PVVNAL++QR+ +ENI RACVGL P+N+M+LE+K
Sbjct:  345 APLQFRSKEVTKSSVVDDMVQSNRVLYAPGEEPDHCVVIKYVPYVGDSKRALDEYTSELMLGGTNTLVLHNTCEDSLLAAPIMLDLVLLTELCQRVSFCTDSDPEPQGFHPVLSVLSFLFKAPLVPPGSPVVNALFRQRSCIENIFRACVGLPPQNHMLLEHK 507          
BLAST of CX047648 vs. ExPASy Swiss-Prot
Match: INO1_DROME (Inositol-3-phosphate synthase OS=Drosophila melanogaster GN=Inos PE=1 SV=1)

HSP 1 Score: 228.409 bits (581), Expect = 3.407e-59
Identity = 115/165 (69.70%), Postives = 135/165 (81.82%), Query Frame = -2
Query:  290 APQTFRSKEISKSNVVDDMVSSNGILYGPGEHPDHVVVIKYVPYVGDSKRAMDEYTSEIFMGGKNTIVLHNTCEDFFLAAPIVLDLVLLAEFSTRIQLK-AEGE-GKFHSFHPVATIFSYLTKVPLVPPGTPVVNALWKQRAMLENILRACVGLAPENNMILEYK 778
            APQ FRSKEISKSNVVDDMV+SN +LYGP EHPDHVVVIKYVPYVGDSKRAMDEYTSEI MGG NT+V+HNTCED  LA P++LDLV+L E STRIQL+ AE E   +  F PV ++ SYL K PLVP G+ VVN+L++QRA +ENILR C+GL P ++M LE +
Sbjct:  349 APQQFRSKEISKSNVVDDMVASNRLLYGPDEHPDHVVVIKYVPYVGDSKRAMDEYTSEIMMGGHNTLVIHNTCEDSLLATPLILDLVILGELSTRIQLRNAEKESAPWVPFKPVLSLLSYLCKAPLVPQGSQVVNSLFRQRAAIENILRGCIGLPPISHMTLEQR 513          
BLAST of CX047648 vs. ExPASy Swiss-Prot
Match: INO1_BOVIN (Inositol-3-phosphate synthase 1 OS=Bos taurus GN=ISYNA1 PE=2 SV=1)

HSP 1 Score: 226.483 bits (576), Expect = 1.295e-58
Identity = 107/163 (65.64%), Postives = 130/163 (79.75%), Query Frame = -2
Query:  290 APQTFRSKEISKSNVVDDMVSSNGILYGPGEHPDHVVVIKYVPYVGDSKRAMDEYTSEIFMGGKNTIVLHNTCEDFFLAAPIVLDLVLLAEFSTRIQLKAEGEGKFHSFHPVATIFSYLTKVPLVPPGTPVVNALWKQRAMLENILRACVGLAPENNMILEYK 778
            AP  FRSKE+SKS+VVDDMV SN +LY PGE PDH VVIKYVPYVGDSKRA+DEYTSE+ +GG NT+VLHNTCED  LAAPI+LDL LL E   R+    + +    SFHPV ++  +L K PL PPG+PVVNAL++QR+ +ENILRACVGL P+N+M+LE+K
Sbjct:  345 APPQFRSKEVSKSSVVDDMVHSNPVLYSPGEQPDHCVVIKYVPYVGDSKRALDEYTSELMLGGTNTLVLHNTCEDSLLAAPIMLDLALLTELCQRVSFCTDVDPDPQSFHPVLSLLGFLFKAPLAPPGSPVVNALFRQRSCIENILRACVGLPPQNHMLLEHK 507          
BLAST of CX047648 vs. ExPASy Swiss-Prot
Match: INO1_MOUSE (Inositol-3-phosphate synthase 1 OS=Mus musculus GN=Isyna1 PE=2 SV=1)

HSP 1 Score: 225.328 bits (573), Expect = 2.884e-58
Identity = 106/163 (65.03%), Postives = 131/163 (80.37%), Query Frame = -2
Query:  290 APQTFRSKEISKSNVVDDMVSSNGILYGPGEHPDHVVVIKYVPYVGDSKRAMDEYTSEIFMGGKNTIVLHNTCEDFFLAAPIVLDLVLLAEFSTRIQLKAEGEGKFHSFHPVATIFSYLTKVPLVPPGTPVVNALWKQRAMLENILRACVGLAPENNMILEYK 778
            AP  FRSKE++KS+VVDDMV SN +LY PGE PDH VVIKYVPYVGDSKRA+DEYTSE+ +GG NT+VLHNTCED  LAAPI+LDLVLL E   R+    + + +   FH V ++ S+L K PLVPPG+PVVNAL++QR+ +ENI RACVGL P+N+M+LE+K
Sbjct:  345 APLQFRSKEVTKSSVVDDMVHSNHVLYAPGERPDHCVVIKYVPYVGDSKRALDEYTSELMLGGTNTLVLHNTCEDSLLAAPIMLDLVLLTELCQRVSFCTDSDPEPQGFHTVLSLLSFLFKAPLVPPGSPVVNALFRQRSCIENIFRACVGLPPQNHMLLEHK 507          
BLAST of CX047648 vs. ExPASy Swiss-Prot
Match: INO1_YEAST (Inositol-3-phosphate synthase OS=Saccharomyces cerevisiae GN=INO1 PE=1 SV=3)

HSP 1 Score: 168.318 bits (425), Expect = 4.184e-41
Identity = 87/168 (51.79%), Postives = 111/168 (66.07%), Query Frame = -2
Query:  296 APQTFRSKEISKSNVVDDMVSSNGILYGP--GEHPDHVVVIKYVPYVGDSKRAMDEYTSEIFMGGKNTIVLHNTCEDFFLAAPIVLDLVLLAEFSTRIQLK-----AEGEGKFHSFHPVATIFSYLTKVPLVPPGTPVVNALWKQRAMLENILRACVGLAPENNMILE 778
            AP+ FRSKEISKS+V+DD+++SN ILY    G+  DH +VIKY+  VGDSK AMDEY SE+ +GG N I +HN CED  LA P+++DL+++ EF TR+  K      E  GKF +F+PV T  SY  K PL  PG   VN L KQR  LEN LR  +GL  +N +  E
Sbjct:  362 APKQFRSKEISKSSVIDDIIASNDILYNDKLGKKVDHCIVIKYMKPVGDSKVAMDEYYSELMLGGHNRISIHNVCEDSLLATPLIIDLLVMTEFCTRVSYKKVDPVKEDAGKFENFYPVLTFLSYWLKAPLTRPGFHPVNGLNKQRTALENFLRLLIGLPSQNELRFE 529          
BLAST of CX047648 vs. ExPASy Swiss-Prot
Match: INO1_CANAL (Inositol-3-phosphate synthase OS=Candida albicans GN=INO1 PE=1 SV=1)

HSP 1 Score: 167.548 bits (423), Expect = 7.136e-41
Identity = 82/163 (50.31%), Postives = 110/163 (67.48%), Query Frame = -2
Query:  296 APQTFRSKEISKSNVVDDMVSSNGILYGP--GEHPDHVVVIKYVPYVGDSKRAMDEYTSEIFMGGKNTIVLHNTCEDFFLAAPIVLDLVLLAEFSTRIQLKAEGEGKFHSFHPVATIFSYLTKVPLVPPGTPVVNALWKQRAMLENILRACVGLAPENNMILE 778
            +P+ FRSKEISK +VVDD++ SN +LY    G+  DH +VIKY+P VGDSK AMDEY SE+ +GG N I +HN CED  LA P+++DLV+  EF+TR+Q+K  G+  +   +PVA++ SY  K PL  PG   +N L KQR  L N+L   VGL  +N +  E
Sbjct:  354 SPKQFRSKEISKQSVVDDIIESNELLYNKESGDKVDHCIVIKYLPAVGDSKVAMDEYYSELMLGGHNKISIHNVCEDSLLATPLIIDLVVATEFATRVQVKGPGKSDYDELYPVASLLSYWLKAPLARPGFKPINGLNKQRQQLVNLLSVLVGLPIDNELRFE 516          
BLAST of CX047648 vs. ExPASy Swiss-Prot
Match: INO1_CANGA (Inositol-3-phosphate synthase OS=Candida glabrata GN=INO1 PE=3 SV=1)

HSP 1 Score: 159.073 bits (401), Expect = 2.538e-38
Identity = 81/161 (50.31%), Postives = 106/161 (65.84%), Query Frame = -2
Query:  323 APQTFRSKEISKSNVVDDMVSSNGILYGP--GEHPDHVVVIKYVPYVGDSKRAMDEYTSEIFMGGKNTIVLHNTCEDFFLAAPIVLDLVLLAEFSTRIQLK-------AEGEGKFHSFHPVATIFSYLTKVPLVPPGTPVVNALWKQRAMLENILRACVGL 778
            +PQ FRSKEISK++VVDD++ SN ILY    G   DH +VIKY+  VGDSK AMDEY SE+ +GG N I +HN CED  LA P+++DL+++ EF +R+  +       AE +G F +F+PV +  SY  K PL  PG   +N L KQR  LEN LR  +GL
Sbjct:  365 SPQQFRSKEISKASVVDDIIESNPILYNDKLGNKIDHCIVIKYMHAVGDSKVAMDEYYSELMLGGHNRISIHNVCEDSLLATPLIIDLIVMTEFCSRVTYRNVDGQDGAEAKGDFENFYPVLSFLSYWLKAPLTKPGYQPINGLNKQRTALENFLRLLIGL 525          
The following BLAST results are available for this feature:
BLAST of CX047648 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 27
Match NameE-valueIdentityDescription
INO1_RAT1.997e-5965.64Inositol-3-phosphate synthase 1 OS=Rattus norvegic... [more]
INO1_DROME3.407e-5969.70Inositol-3-phosphate synthase OS=Drosophila melano... [more]
INO1_BOVIN1.295e-5865.64Inositol-3-phosphate synthase 1 OS=Bos taurus GN=I... [more]
INO1_MOUSE2.884e-5865.03Inositol-3-phosphate synthase 1 OS=Mus musculus GN... [more]
INO1_YEAST4.184e-4151.79Inositol-3-phosphate synthase OS=Saccharomyces cer... [more]
INO1_CANAL7.136e-4150.31Inositol-3-phosphate synthase OS=Candida albicans ... [more]
INO1_CANGA2.538e-3850.31Inositol-3-phosphate synthase OS=Candida glabrata ... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS09_15F04_b Ruby Orange Developing Seed cDNA Library UCRCS09 Citrus sinensis cDNA clone UCRCS09-15F04-L8-1-5.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX047648 ID=CX047648; Name=CX047648; organism=Citrus sinensis; type=EST; length=779bp
TTTTTTTTTTTTTTTTTGCCGCAATACAGTTATTTATGAACTTCCATATA
TTATCTACTTGCAATACAAAAAATTTCATGCTCCGAAATGAGCTACAAAG
GCAATGGGCTACACTCCAGCACCTTCATTAAAAAAATAAAAAAACAAACA
TACAGGACACACTAATATTAACCACAATTTCATGACACAAGACATTACAA
TCAGTAATTAAATGGACCACCACAGCTTTGATTGGTGACAGAAAAAGGGA
AAACCGGTTCTTCCACTTTTCTCCCCTGCAAGTTCTTCACTTGTATTCCA
AAATCATGTTGTTCTCAGGAGCCAAGCCAACGCAAGCCCTCAAAATGTTC
TCAAGCATTGCACGCTGCTTCCACAGCGCATTCACCACTGGTGTGCCTGG
AGGGACCAAAGGAACCTTGGTGAGGTAGCTGAAAATTGTAGCCACAGGGT
GGAAAGAGTGGAATTTGCCCTCTCCTTCAGCTTTGAGCTGGATCCTGGTG
CTGAATTCAGCCAGCAAAACCAAATCTAGAACGATTGGAGCAGCCAAAAA
AAAGTCCTCACACGTGTTGTGCAGCACAATGGTGTTCTTGCCACCCATGA
AAATTTCTGAAGTGTACTCATCCATGGCTCTCTTGCTATCGCCAACATAT
GGCACATACTTGATGACCACAACGTGGTCGGGGTGTTCACCAGGCCCATA
AAGGATACCATTGCTGGAGACCATGTCATCAACAACATTACTTTTGGAAA
TCTCCTTGGAGCGGAAGGTTTGAGGGGCT
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