CX047618
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX047618 vs. ExPASy Swiss-Prot
Match: EF1GB_XENLA (Elongation factor 1-gamma-B OS=Xenopus laevis GN=eef1g-B PE=2 SV=1) HSP 1 Score: 102.449 bits (254), Expect = 2.497e-21 Identity = 53/152 (34.87%), Postives = 89/152 (58.55%), Query Frame = 3 Query: 45 SKMILDEWKRLYSNTKTNFREVAIKGFWDMYDPEGYSLWFCDYKYNDENTVSFVTLNKVGGFLQRMDLARKYAFGKMLIIGSEPPFKVKGLWLFRGQEIPQFIMDECY--DMELYDWKKVDINDEAQKERVSQMIEDHEPFEGEALLDAKCF 494 S I+DE+KR YSN T VA+ FW+ ++ EG+S+W+ +YK+ +E T +F++ N + G QR+D RK AF +++ G+ + G+W+FRG ++ F + E + D E Y W+K+ E+ E M++++ +EGE K F Sbjct: 286 SSFIMDEFKRKYSNEDT--LTVALPYFWEHFEKEGWSIWYAEYKFPEELTQTFMSCNLITGMFQRLDKLRKTAFASVILFGTNNNSTISGVWVFRGHDL-AFTLSEDWQIDYESYTWRKL----ESDSEECRTMVKEYFAWEGEFKHVGKAF 430
BLAST of CX047618 vs. ExPASy Swiss-Prot
Match: EF1G_CAEEL (Probable elongation factor 1-gamma OS=Caenorhabditis elegans GN=F17C11.9 PE=1 SV=1) HSP 1 Score: 102.064 bits (253), Expect = 3.261e-21 Identity = 48/149 (32.21%), Postives = 86/149 (57.72%), Query Frame = 3 Query: 54 ILDEWKRLYSNTKTNFREVAIKGFWDMYDPEGYSLWFCDYKYNDENTVSFVTLNKVGGFLQRMDLARKYAFGKMLIIGSEPPFKVKGLWLFRGQEIP-QFIMDECYDMELYDWKKVDINDEAQKERVSQMIEDHEPFEGEALLDAKCFK 497 +LD +KR YSN T + AI FW+ +D + +S+W C+YKY ++ T++F++ N + G QR++ +K AF M++ G++ + G+W+++G ++ + D D E Y W K+D +A K+ V++ + F G+ K FK Sbjct: 252 VLDNFKRSYSNEDTATK--AIPHFWENFDADNWSIWKCEYKYPEDLTLAFMSCNLINGMYQRLEKLKKNAFASMILFGTDNNSTISGIWVWKGDKLAFELSPDWQVDYESYTWTKLDAKSDATKKEVNEYLMWEGDFGGKKFNQGKIFK 398
BLAST of CX047618 vs. ExPASy Swiss-Prot
Match: EF1G_DROME (Elongation factor 1-gamma OS=Drosophila melanogaster GN=Ef1gamma PE=1 SV=2) HSP 1 Score: 99.7525 bits (247), Expect = 1.619e-20 Identity = 49/127 (38.58%), Postives = 77/127 (60.63%), Query Frame = 3 Query: 60 DEWKRLYSNTKTNFREVAIKGFWDMYDPEGYSLWFCDYKYNDENTVSFVTLNKVGGFLQRMDLARKYAFGKMLIIGSEPPFKVKGLWLFRGQEIPQFIM-DECYDMELYDWKKVDINDEAQKERVSQ 437 D++KR+YSN +I F+D +D E YS+WF +YKYN+E + F++ N + G QR+D RK AF + + G + + G+W++RGQ++ + D D E+YDWKK+D E K+ V+Q Sbjct: 287 DDFKRVYSNED---EAKSIPYFFDKFDAENYSIWFGEYKYNEELSKVFMSCNLITGMFQRLDKMRKAAFASVCLFGEDGNSTISGIWVWRGQDLAFTLSPDWQIDYEVYDWKKLDAKSEETKKLVTQ 410
BLAST of CX047618 vs. ExPASy Swiss-Prot
Match: EF1G_ARTSA (Elongation factor 1-gamma OS=Artemia salina PE=1 SV=3) HSP 1 Score: 98.5969 bits (244), Expect = 3.606e-20 Identity = 46/128 (35.94%), Postives = 76/128 (59.38%), Query Frame = 3 Query: 57 LDEWKRLYSNTKTNFREVAIKGFWDMYDPEGYSLWFCDYKYNDENTVSFVTLNKVGGFLQRMDLARKYAFGKMLIIGSEPPFKVKGLWLFRGQEIP-QFIMDECYDMELYDWKKVDINDEAQKERVSQ 437 +D++KR YSN N +I FW+ +D E YS+W+ +YKY DE +++ N + G QR++ RK AF + + G + + G+W++RGQ++ + D D E YDWKK+D + + K+ V+Q Sbjct: 285 MDDFKRFYSN---NEETKSIPYFWEKFDKENYSIWYSEYKYQDELAKVYMSCNLITGMFQRIEKMRKQAFASVCVFGEDNDSSISGIWVWRGQDLAFKLSPDWQIDYESYDWKKLDPDAQETKDLVTQ 409
BLAST of CX047618 vs. ExPASy Swiss-Prot
Match: EF1G_SCHPO (Elongation factor 1-gamma OS=Schizosaccharomyces pombe GN=tef3 PE=1 SV=1) HSP 1 Score: 92.0485 bits (227), Expect = 3.375e-18 Identity = 53/149 (35.57%), Postives = 80/149 (53.69%), Query Frame = 3 Query: 57 LDEWKRLYSNTKTNFREVAIKGFWDMYDPEGYSLWFCDYKY-NDENTVSFVTLNKVGGFLQRMDLARKYAFGKMLIIGSEPPFKVKGLWLFRGQE-IPQFIMDECYDMELYDWKKVDINDEAQKERVSQMIEDHEPFEGEALLDAKCFK 497 ++E+KR+YSN T R A+ F++ +DPE YS+W DY Y D F+T N +GGF QR++ +RKY FG ++IG + G ++ +G + +P F D D Y + K+DIN K + +P EG + D K K Sbjct: 265 IEEYKRVYSNQDT--RSGALPWFFEHFDPENYSVWKVDYSYPEDLKQPVFMTNNLIGGFFQRLEASRKYIFGCCVVIGENGDNTITGAFVIKGHDYVPAF--DVAPDWGSYTFTKLDINKPEDKAFIEDAWAWDKPIEGREVADGKVCK 409 The following BLAST results are available for this feature:
BLAST of CX047618 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 25
Pages
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CX047618 ID=CX047618; Name=CX047618; organism=Citrus sinensis; type=EST; length=725bpback to top |