CX047615
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX047615 vs. ExPASy Swiss-Prot
Match: FADS2_RAT (Fatty acid desaturase 2 OS=Rattus norvegicus GN=Fads2 PE=2 SV=1) HSP 1 Score: 92.8189 bits (229), Expect = 2.420e-18 Identity = 66/231 (28.57%), Postives = 104/231 (45.02%), Query Frame = 1 Query: 202 EELRTHNKAEDLWISIQGKVYDVTEWAKQHPGGDVPLLNLAGQDVTDAFIAYHPGTAWQYLDKLFTGYFVQDFEV---------------SEISKDYRRLYIEFAKQGMFEKKQHVASCALTCVALMFVVVVYGVLCCESV-W---AHLGSG--------MLLGFLWIQSAYVGHDSGHYQVMTSPKFNKIAQLISGNCLTGISIAWWKWTHNAHHIACNSLDYDPDLQHI 813 EE++ HN D W+ I KVY+VT+W+++HPGG + + +G+D TDAF A+H LD F G F++ + S+I++D+R L +F K H L F +++ ++ ES+ W ++ G+G +L Q+ ++ HD GH V +N I L G S WW H HH N DPD++ + Sbjct: 24 EEIQKHNLRTDRWLVIDRKVYNVTKWSQRHPGGHRVIGHYSGEDATDAFRAFH-------LDLDFVGKFLKPLLIGELAPEEPSLDRGKSSQITEDFRALKKTAEDMNLF-KTNH----------LFFFLLLSHIIVMESIAWFILSYFGNGWIPTVITAFVLATSQAQAGWLQHDYGHLSVYKKSIWNHIVHKFVIGHLKGASANWWNHRHFQHHAKPNIFHKDPDIKSL 236
BLAST of CX047615 vs. ExPASy Swiss-Prot
Match: FADS2_MOUSE (Fatty acid desaturase 2 OS=Mus musculus GN=Fads2 PE=2 SV=1) HSP 1 Score: 91.6633 bits (226), Expect = 5.391e-18 Identity = 64/231 (27.71%), Postives = 103/231 (44.59%), Query Frame = 1 Query: 202 EELRTHNKAEDLWISIQGKVYDVTEWAKQHPGGDVPLLNLAGQDVTDAFIAYHPGTAWQYLDKLFTGYFVQDFEV---------------SEISKDYRRLYIEFAKQGMFEKKQHVASCALTCVALMFVVVVYGVLCCES----VWAHLGSG--------MLLGFLWIQSAYVGHDSGHYQVMTSPKFNKIAQLISGNCLTGISIAWWKWTHNAHHIACNSLDYDPDLQHI 813 EE++ HN D W+ I KVY+VT+W+++HPGG + + +G+D TDAF A+H LD F G F++ + S+I++D+R L +F K H L F +++ ++ ES + ++ G+G +L Q+ ++ HD GH V +N + L G S WW H HH N DPD++ + Sbjct: 24 EEIQKHNLRTDRWLVIDRKVYNVTKWSQRHPGGHRVIGHYSGEDATDAFRAFH-------LDLDFVGKFLKPLLIGELAPEEPSLDRGKSSQITEDFRALKKTAEDMNLF-KTNH----------LFFFLLLSHIIVMESLAWFILSYFGTGWIPTLVTAFVLATSQAQAGWLQHDYGHLSVYKKSIWNHVVHKFVIGHLKGASANWWNHRHFQHHAKPNIFHKDPDIKSL 236
BLAST of CX047615 vs. ExPASy Swiss-Prot
Match: FADS3_MOUSE (Fatty acid desaturase 3 OS=Mus musculus GN=Fads3 PE=2 SV=2) HSP 1 Score: 90.1225 bits (222), Expect = 1.569e-17 Identity = 55/210 (26.19%), Postives = 97/210 (46.19%), Query Frame = 1 Query: 202 EELRTHNKAEDLWISIQGKVYDVTEWAKQHPGGDVPLLNLAGQDVTDAFIAYHPGTAW--QYLDKLFTGYFVQD------FEVSEISKDYRRLYIEFAKQGMFEKKQHVASCALTCVALMFVVVVYGVLCCESVW-AHLGSGMLLGFLWIQSAYVGHDSGHYQVMTSPKFNKIAQLISGNCLTGISIAWWKWTHNAHHIACNSLDYDPDL 804 E++R H+ D W+ I+ +VYD++ WA++HPGG + + +D TDAF A+H + ++L L G + + +++ +D+R L +FE + L + M ++ + W + + + ++L Q + HD GH + T ++N +AQ L G S WW + H HH N DPD+ Sbjct: 30 EQIRQHDLPGDKWLVIERRVYDISRWAQRHPGGSRLIGHHGAEDATDAFHAFHQDLHFVRKFLKPLLIGELAPEEPSQDGAQNAQLIEDFRALRQAAEDMKLFEADTTFFALLLGHILAMELLAWLIIYLLGPGWVSSILAALILAISQAQCWCLQHDLGHASIFTKSRWNHVAQQFVMGQLKGFSAHWWNFRHFQHHAKPNIFHKDPDV 239
BLAST of CX047615 vs. ExPASy Swiss-Prot
Match: FADS1_MOUSE (Fatty acid desaturase 1 OS=Mus musculus GN=Fads1 PE=2 SV=1) HSP 1 Score: 89.7373 bits (221), Expect = 2.049e-17 Identity = 60/239 (25.10%), Postives = 110/239 (46.03%), Query Frame = 1 Query: 130 LPPQHFPIFQSAALMEAEKKYITAEELRTHNKAE-DLWISIQGKVYDVTEWAKQHPGGDVPLLNLAGQDVTDAFIAYH--PGTAWQYLDKLFTGYFVQD---FEVSE---ISKDYRRLYIEFAKQGMFEKKQ-----HVASCALTCVALMFVVVVYGVLCCESVWAHLGSGMLLGFLWIQSAYVGHDSGHYQVMTSPKFNKIAQLISGNCLTGISIAWWKWTHNAHHIACNSLDYDPDL 804 + P P A+ + +Y T EE+ + E + W+ I KVY++++++++HPGG + + AGQD TD F+A+H G +Y++ L G + FE ++ ++ ++R L + G+ + ++ L VA + ++G S+ + +LL + Q+ ++ HD GH V + +N + L G +WW H HH N DPD+ Sbjct: 1 MAPDPVPTPGPASAQLRQTRYFTWEEVAQRSGREKERWLVIDRKVYNISDFSRRHPGGSRVISHYAGQDATDPFVAFHINKGLVRKYMNSLLIGELAPEQPSFEPTKNKALTDEFRELRATVERMGLMKANHLFFLVYLLHILLLDVAAWLTLWIFGT----SLVPFILCAVLLSTVQAQAGWLQHDFGHLSVFGTSTWNHLLHHFVIGHLKGAPASWWNHMHFQHHAKPNCFRKDPDI 235
BLAST of CX047615 vs. ExPASy Swiss-Prot
Match: FADS3_HUMAN (Fatty acid desaturase 3 OS=Homo sapiens GN=FADS3 PE=2 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 2.676e-17 Identity = 57/210 (27.14%), Postives = 96/210 (45.71%), Query Frame = 1 Query: 202 EELRTHNKAEDLWISIQGKVYDVTEWAKQHPGGDVPLLNLAGQDVTDAFIAYHPGTAW--QYLDKLFTGYFV-----QDFEV-SEISKDYRRLYIEFAKQGMFEKKQHVASCALTCVALMFVVVVYGVLCCESVWAHLG-SGMLLGFLWIQSAYVGHDSGHYQVMTSPKFNKIAQLISGNCLTGISIAWWKWTHNAHHIACNSLDYDPDL 804 E++R H++ D W+ I+ +VYD++ WA++HPGG + + +D TDAF A+H + ++L L G QD + +++ +D+R L+ +F+ + L + M V+ + W + +L QS + HD GH + +N +AQ L G S WW + H HH N DPD+ Sbjct: 26 EQIRAHDQPGDKWLVIERRVYDISRWAQRHPGGSRLIGHHGAEDATDAFRAFHQDLNFVRKFLQPLLIGELAPEEPSQDGPLNAQLVEDFRALHQAAEDMKLFDASPTFFAFLLGHILAMEVLAWLLIYLLGPGWVPSALAAFILAISQAQSWCLQHDLGHASIFKKSWWNHVAQKFVMGQLKGFSAHWWNFRHFQHHAKPNIFHKDPDV 235
BLAST of CX047615 vs. ExPASy Swiss-Prot
Match: FADS1_RAT (Fatty acid desaturase 1 OS=Rattus norvegicus GN=Fads1 PE=2 SV=1) HSP 1 Score: 88.5817 bits (218), Expect = 4.564e-17 Identity = 57/222 (25.68%), Postives = 105/222 (47.30%), Query Frame = 1 Query: 181 EKKYITAEELRTHNKAE-DLWISIQGKVYDVTEWAKQHPGGDVPLLNLAGQDVTDAFIAYH--PGTAWQYLDKLFTGYFVQD---FEVSE---ISKDYRRLYIEFAKQGMFEKKQ-----HVASCALTCVALMFVVVVYGVLCCESVWAHLGSGMLLGFLWIQSAYVGHDSGHYQVMTSPKFNKIAQLISGNCLTGISIAWWKWTHNAHHIACNSLDYDPDL 804 + +Y T EE+ + E + W+ I KVY++++++++HPGG + + AGQD TD F+A+H G +Y++ L G + FE ++ ++ ++R L + G+ + ++ L VA + ++G S+ +LL + Q+ ++ HD GH V ++ +N + L G +WW H HH N DPD+ Sbjct: 18 QMRYFTWEEVAQRSGREKERWLVIDRKVYNISDFSRRHPGGSRVISHYAGQDATDPFVAFHINKGLVRKYMNSLLIGELAPEQPSFEPTKNKALTDEFRELRATVERMGLMKANHLFFLFYLLHILLLDVAAWLTLWIFGT----SLVPFTLCAVLLSTVQAQAGWLQHDFGHLSVFSTSTWNHLVHHFVIGHLKGAPASWWNHMHFQHHAKPNCFRKDPDI 235
BLAST of CX047615 vs. ExPASy Swiss-Prot
Match: FADS3_RAT (Fatty acid desaturase 3 OS=Rattus norvegicus GN=Fads3 PE=2 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 5.961e-17 Identity = 55/210 (26.19%), Postives = 97/210 (46.19%), Query Frame = 1 Query: 202 EELRTHNKAEDLWISIQGKVYDVTEWAKQHPGGDVPLLNLAGQDVTDAFIAYHPGTAW--QYLDKLFTGYFVQD------FEVSEISKDYRRLYIEFAKQGMFEKKQHVASCALTCVALMFVVVVYGVLCCESVW-AHLGSGMLLGFLWIQSAYVGHDSGHYQVMTSPKFNKIAQLISGNCLTGISIAWWKWTHNAHHIACNSLDYDPDL 804 E++R H+ D W+ I+ +VYD++ WA++HPGG + + + +D TDAF A+H + ++L L G + + +++ +D+R L +FE + L + M ++ V W + + + ++L Q + HD GH + ++N +AQ L G S WW + H HH N DPD+ Sbjct: 30 EQIRQHDLPGDKWLVIERRVYDISRWAQRHPGGSRLIGHHSAEDATDAFHAFHQDLHFVRKFLKPLLIGELAPEEPSQDGAQNAQLIEDFRALRQAAEDMKLFEADTTFFALLLGHILAMELLAWLLVYLLGPGWVSSVLAALILAISQAQCWCLQHDLGHASIFPKSRWNHVAQQFVMGQLKGFSAHWWNFRHFQHHAKPNIFHKDPDV 239
BLAST of CX047615 vs. ExPASy Swiss-Prot
Match: FAD2L_HUMAN (Fatty acid desaturase 2-like protein OS=Homo sapiens PE=3 SV=2) HSP 1 Score: 80.4925 bits (197), Expect = 1.243e-14 Identity = 62/216 (28.70%), Postives = 93/216 (43.06%), Query Frame = 1 Query: 205 ELRTHNKAEDLWISIQGKVYDVTEWAKQHPGGDVPLLNLAGQDVTDAFIAYHP--GTAWQYLDKLFTGYFV------QDFEVSEISKDYRRLYIEFAKQGMFEKKQHVASCALTCVALMFVVVVYGVLCCESVWAHLGSG----MLLGFL----WIQSAYVGHDSGHYQVMTSPKFNKIAQLISGNCLTGISIAWWKWTHNAHHIACNSLDYDPDL 804 E++ HN D + I KVY+V+ WA +HPGG L + AG+D D F A HP YL L G + + S++ KD++ L+ MF L L FV ++ + + H GSG M + FL S+++ HD+GH + K+N + L G+S W + H H+ N DPD+ Sbjct: 63 EIQRHNHEADQLV-INCKVYNVSSWADRHPGGHQVLNHCAGEDAMDVFRAMHPELDIVQLYLKPLLIGELAPGEPSQERHKNSQLVKDFQELWSIAEAMNMFHAN-------LGFFFLHFVQILILEVLAWLIVYHFGSGWPVTMFISFLLTISQASSSFLQHDAGHLSIFRKSKWNHVVHKFVMCHLKGLSADRWNYWHFEQHVKPNIYPKDPDI 270
BLAST of CX047615 vs. ExPASy Swiss-Prot
Match: FAD5B_DICDI (Delta(5) fatty acid desaturase B OS=Dictyostelium discoideum GN=fadB PE=1 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 3.616e-14 Identity = 63/220 (28.64%), Postives = 97/220 (44.09%), Query Frame = 1 Query: 187 KYITAEELRTHNKAEDLWISIQGKVYDVTEWAKQHPGGDVPLLNLAGQDVTDAFIAYHPGTAWQY--LDKLFTGY--------FVQDFEVSEISKDYRRLYIEFAKQGMFEKKQHVASCALTCVALMFVVVVY--GVLCCESVWAHLGSGMLLGFL-WIQSAYVGHDSGHYQVMTSPKFNKIAQLISGNCLTGISIAWWKWTH-NAHHIACNSLDYDPDL 804 K T +E+ HN+ DLWI + GKVY++T+W HPGG+ LL AG+D T+ F +YHP T Y + + GY +V+ E K R + + + Q + K V + +F+ V Y + W + +L G + + HD+ H + +P KI + + G S W H HH+ N + DPDL Sbjct: 13 KLYTWDEVSKHNQKNDLWIIVDGKVYNITKWVPLHPGGEDILLLSAGRDATNLFESYHPMTDKHYSLIKQYEIGYISSYEHPKYVEKSEFYSTLKQRVRKHFQTSSQ---DPKVSVGVFTRMVLIYLFLFVTYYLSQFSTDRFWLNCIFAVLYGVANSLFGLHTMHDACHTAITHNPMTWKILG-ATFDLFAGASFYAWCHQHVIGHHLYTNVRNADPDL 228
BLAST of CX047615 vs. ExPASy Swiss-Prot
Match: FAD5A_DICDI (Delta(5) fatty acid desaturase A OS=Dictyostelium discoideum GN=fadA PE=1 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 1.052e-13 Identity = 65/220 (29.55%), Postives = 95/220 (43.18%), Query Frame = 1 Query: 187 KYITAEELRTHNKAEDLWISIQGKVYDVTEWAKQHPGGDVPLLNLAGQDVTDAFIAYHP--GTAWQYLDKLFTGY--------FVQDFEVSEISKDYRRLYIEFAKQGMFEKKQHVASCALTCVALMFVVVVYGVLCCESVWAHLGSGMLLGFLWIQSAY---VGHDSGHYQVMTSPKFNKIAQLISGNCLTGISIAWWKWTH-NAHHIACNSLDYDPDL 804 K + EL HN D W+++ GKVYD+T W HPGG LL AG+DVT+ F +YHP L GY FVQ + + K+ R + + Q + + V+ + + + V V Y + S +L + + + S + + HDS H + P K S + +TG S W H HHI N + DPDL Sbjct: 14 KQYSWSELAKHNTENDCWVAVDGKVYDITRWVPLHPGGKEVLLLAAGRDVTNLFESYHPMSDKPTSILKNYEIGYISSYEHPKFVQKSDFYKTLKERVRKHFKATDQ---DPQMAVSIFSRLALVYLLVFVTYYLAHYTSNNFYLNCFLAIVYALCNSLFSMHMMHDSCHAAISHYPGVWKWMG-ASFDFVTGASFLSWCHQHVIGHHIYTNVRNADPDL 229 The following BLAST results are available for this feature:
BLAST of CX047615 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 24
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Sequences
The
following sequences are available for this feature:
EST sequence >CX047615 ID=CX047615; Name=CX047615; organism=Citrus sinensis; type=EST; length=813bpback to top |