CX047579
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX047579 vs. ExPASy Swiss-Prot
Match: CAF1H_ARATH (Putative CCR4-associated factor 1 homolog 8 OS=Arabidopsis thaliana GN=CAF1-8 PE=3 SV=1) HSP 1 Score: 97.4413 bits (241), Expect = 9.384e-20 Identity = 68/205 (33.17%), Postives = 99/205 (48.29%), Query Frame = 1 Query: 178 LISQVIDRYPFISMDTEFPGLVYRPDVDPSTRPYFRQRKPSDHYKVLKSNVDALNLIQVGLTLSDSSGNLPDLGSGGNNKFIWEFNFRDFDIATDAHAPDSIELLRLQGIDFERNRKEGVDSVRFAELMMSSGLVCNESVSWVTFHSAYDFGYLVKILTRRSLPSGLDEFLTILRVFFGNNIYDVKHIMRFCQSLYG--GLDRVA 786 LI + Y FI++DTEFP + R + + Y + +VD LIQ+GLTL D +G + GG WE NF DF + DA SIE LR G+D + R+EG+ F M +++WVTFH +YD YL+K T +LP + F + G ++YD+K + C+ L GL+ +A Sbjct: 3 LIEDCLRSYRFIAIDTEFPSTL---------RETTQHATDEERYMDMSFSVDRAKLIQLGLTLFDINGRI-----GGT----WEINFSDFGV-DDARNEKSIEFLRRNGLDLRKIREEGIRIEGFFSEMFWMLKKTRRNITWVTFHGSYDIAYLLKGFTGEALPVTSERFSKAVARVLG-SVYDLKVMAGRCEGLSSRLGLETLA 187
BLAST of CX047579 vs. ExPASy Swiss-Prot
Match: CAF1C_ARATH (Putative CCR4-associated factor 1 homolog 3 OS=Arabidopsis thaliana GN=CAF1-3 PE=1 SV=1) HSP 1 Score: 94.3597 bits (233), Expect = 7.944e-19 Identity = 69/218 (31.65%), Postives = 96/218 (44.04%), Query Frame = 1 Query: 142 EVWASNLESEFELISQVIDRYPFISMDTEFPGLVYRPDVDPSTRPYFRQRKPSDHYKVLKSNVDALNLIQVGLTLSDSSGNLPDLGSGGNNKFIWEFNFRDFDIATDAHAPDSIELLRLQGIDFERNRKEGVDSVRFAELMMSSGLVCNESVSWVTFHSAYDFGYLVKILT-RRSLPSGLDEFLTILRVFFGNNIYDVKHIMRFCQSLYG--GLDRVA 786 EVW N E E I + I++DTEFPG + +D S Y+ +K NVD +LIQ+G TL D G WE N DFD SI L+ G++ ++ R+EG+ F + ++WV F +YD YLVK LT + LP +EF ++ G ++DVK I C L GL R+A Sbjct: 8 EVWRWNKEVEMNSIRDCLKHCSSIAIDTEFPGCLKETPMDAS---------EEIRYRDMKFNVDNTHLIQLGFTLFDRRGFAK----------TWEINLSDFDEHKCFKNDKSIAFLKSNGLNLDKIREEGIGIDEFFRDFSQILTEKDGKITWVNFQGSYDNAYLVKGLTGGKPLPETKEEFHETVQQLLGKFVFDVKKIAESCSGLSSQFGLQRIA 206
BLAST of CX047579 vs. ExPASy Swiss-Prot
Match: CAF1D_ARATH (Putative CCR4-associated factor 1 homolog 4 OS=Arabidopsis thaliana GN=CAF1-4 PE=1 SV=1) HSP 1 Score: 92.0485 bits (227), Expect = 3.943e-18 Identity = 67/218 (30.73%), Postives = 96/218 (44.04%), Query Frame = 1 Query: 142 EVWASNLESEFELISQVIDRYPFISMDTEFPGLVYRPDVDPSTRPYFRQRKPSDHYKVLKSNVDALNLIQVGLTLSDSSGNLPDLGSGGNNKFIWEFNFRDFDIATDAHAPDSIELLRLQGIDFERNRKEGVDSVRFAELMMSSGLVCNESVSWVTFHSAYDFGYLVKILT-RRSLPSGLDEFLTILRVFFGNNIYDVKHIMRFCQSLYG--GLDRVA 786 EVW N E E + I + + I++DTEFPG + +D S Y+ +K NVD +LIQ+G TL D G WE N DF+ SI L+ G++ ++ +EG+ F + ++WV F +YD YLVK LT + LP +EF + G ++DVK I C L GL R+A Sbjct: 3 EVWRWNKEVEMDSIRDCLKHFSSIAIDTEFPGCLKETPMDAS---------EEIRYRDMKFNVDNTHLIQLGFTLFDRRGITK----------TWEINLSDFNEHKCFKNDKSIAFLKSNGLNLDKIGEEGIGIEEFFRDFSQILKEKDGKITWVNFQGSYDNAYLVKGLTGGKPLPETKEEFHETVEQLLGKFVFDVKKIAESCSGLSSRFGLQRIA 201 The following BLAST results are available for this feature:
BLAST of CX047579 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 23
Pages
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CX047579 ID=CX047579; Name=CX047579; organism=Citrus sinensis; type=EST; length=792bpback to top |