CX047566
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX047566 vs. ExPASy Swiss-Prot
Match: G3PA_CHOCR (Glyceraldehyde-3-phosphate dehydrogenase, chloroplastic OS=Chondrus crispus GN=GAPA PE=2 SV=1) HSP 1 Score: 291.582 bits (745), Expect = 4.283e-78 Identity = 149/247 (60.32%), Postives = 185/247 (74.90%), Query Frame = 1 Query: 139 RLDVAEFAGLRANAGATYATGARDASFF-------DAVTAQLTPKVAAGSVPVKKETVAKLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVSNRDPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAPAKGADIPTYVVGVNEKDYDHEVANIVSNASCTTNCLAPFVKVMDEELGIVQGAITTTHSYTGDQ 858 R A+F+G++ ++ A+ S F DA +++ VAA P K ++VAINGFGRIGRNF+RCW GR DS ++VV +ND+ GVK ASHLLKYDS+LGTF ADV +TISV+GK IK+VSNR+PLQLPW E+ IDIV+E TGVFVD PGAGKHI+AGAKKV+ITAP KG I T+VVGVNEKDY H+ +IVSNASCTTNC+APF+KV+D+E G+V+G +TTTHSYTGDQ Sbjct: 24 RSTFAQFSGMKKVNQSSRLQPAQSGSAFGGYSDANDAFYTRVSGIVAATFGPTMK-----VRVAINGFGRIGRNFIRCWAGRSDSNMEVVCINDTSGVKTASHLLKYDSILGTFDADVS-AGEDTISVNGKTIKIVSNRNPLQLPWKEMNIDIVVEATGVFVDAPGAGKHIEAGAKKVLITAPGKGDGIGTFVVGVNEKDYSHDKYDIVSNASCTTNCMAPFMKVLDDEFGVVRGMMTTTHSYTGDQ 264
BLAST of CX047566 vs. ExPASy Swiss-Prot
Match: G3PA_GRAVE (Glyceraldehyde-3-phosphate dehydrogenase, chloroplastic OS=Gracilaria verrucosa GN=GAPA PE=2 SV=1) HSP 1 Score: 283.878 bits (725), Expect = 8.930e-76 Identity = 150/264 (56.82%), Postives = 190/264 (71.97%), Query Frame = 1 Query: 103 TTHSFPTQCSTKRLDVAEFAGLR----------ANAGATYATGARDAS--FFDAVTAQLTPKVAAGSVPVKKETVAKLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVSNRDPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAPAKGADIPTYVVGVNEKDYDHEVANIVSNASCTTNCLAPFVKVMDEELGIVQGAITTTHSYTGDQ 858 +T S CS R A+F+GL+ A G+ + G DA+ FF+AV P + + +K ++VAINGFGRIGRNF+RCW GR DS +DVV +ND+ GVK ASHLLKYDS+LGTF +DV + ++I+VDGK IKVVSNR+PL+LPW E+ IDIV+E TGVFVD GAGKHIQAGAKKV+ITAP KG + T+VVGVN+ Y H+ +IVSNASCTTNC+APF+KV+D+E G+V+G +TTTHSYTGDQ Sbjct: 12 STSSKSAVCSG-RSSFAQFSGLKKVNNTARLQTAEQGSAFG-GVSDANDAFFNAVNTMGAPARTSNAPSMK------VRVAINGFGRIGRNFIRCWAGRTDSNMDVVCINDTSGVKTASHLLKYDSILGTFDSDV-VAGEDSITVDGKTIKVVSNRNPLELPWKEMEIDIVVEATGVFVDAVGAGKHIQAGAKKVLITAPGKGEGVGTFVVGVNDHLYSHDKFDIVSNASCTTNCMAPFMKVLDDEFGVVRGMMTTTHSYTGDQ 266
BLAST of CX047566 vs. ExPASy Swiss-Prot
Match: G3PA_SCEVA (Glyceraldehyde-3-phosphate dehydrogenase A, chloroplastic (Fragment) OS=Scenedesmus vacuolatus GN=GapA PE=2 SV=1) HSP 1 Score: 276.944 bits (707), Expect = 1.092e-73 Identity = 135/182 (74.18%), Postives = 156/182 (85.71%), Query Frame = 1 Query: 313 NGFGRIGRNFLRCWHGRKDSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVSNRDPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAPAKGADIPTYVVGVNEKDYDHEVANIVSNASCTTNCLAPFVKVMDEELGIVQGAITTTHSYTGDQ 858 NGFGRIGRNFLRC R++S L+V+ +NDSGGVK ASHLLKYDS LG F ADVKIVD+ ISV+GK I+VVS+RDP +LPW E+ ID+VIEGTGVF+D PGA KHI+AGAKKV+ITAPAKG+DIPTYVVGVN DY H A I+SNASCTTNCLAPFVKV+DE+ GIV+G +T THSYTGDQ Sbjct: 1 NGFGRIGRNFLRCLETRQNSLLEVIAINDSGGVKQASHLLKYDSTLGKFDADVKIVDDGHISVNGKSIRVVSSRDPTKLPWGEMEIDLVIEGTGVFIDTPGASKHIEAGAKKVLITAPAKGSDIPTYVVGVNAHDYKHSDA-IISNASCTTNCLAPFVKVLDEKFGIVKGTMTNTHSYTGDQ 181
BLAST of CX047566 vs. ExPASy Swiss-Prot
Match: G3P2_SYNY3 (Glyceraldehyde-3-phosphate dehydrogenase 2 OS=Synechocystis sp. (strain PCC 6803) GN=gap2 PE=1 SV=3) HSP 1 Score: 247.284 bits (630), Expect = 9.262e-65 Identity = 118/186 (63.44%), Postives = 146/186 (78.49%), Query Frame = 1 Query: 301 KVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVSNRDPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAPAKGADIPTYVVGVNEKDYDHEVANIVSNASCTTNCLAPFVKVMDEELGIVQGAITTTHSYTGDQ 858 +VAINGFGRIGRNFLRCW GR DS L+VV +ND+ + +HLL+YDS+LG AD+ D +I+V+GK IK VS+R+PL LPWAE +D+VIE TGVFV GA KH+QAGAKKV+ITAP KG +I TYVVGVN +Y HE ++SNASCTTNCLAPF KV+++ GI++G +TTTHSYTGDQ Sbjct: 3 RVAINGFGRIGRNFLRCWLGRTDSQLEVVGINDTSDPRTNAHLLRYDSMLGKLDADIS-ADENSITVNGKTIKCVSDRNPLNLPWAEWNVDLVIEATGVFVTHEGATKHVQAGAKKVLITAPGKGPNIGTYVVGVNAHEYKHEEYEVISNASCTTNCLAPFGKVINDNFGIIKGTMTTTHSYTGDQ 187
BLAST of CX047566 vs. ExPASy Swiss-Prot
Match: G3P2_ANASP (Glyceraldehyde-3-phosphate dehydrogenase 2 OS=Anabaena sp. (strain PCC 7120) GN=gap2 PE=1 SV=1) HSP 1 Score: 232.646 bits (592), Expect = 2.361e-60 Identity = 111/187 (59.36%), Postives = 144/187 (77.01%), Query Frame = 1 Query: 298 LKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVSNRDPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAPAKGADIPTYVVGVNEKDYDHEVANIVSNASCTTNCLAPFVKVMDEELGIVQGAITTTHSYTGDQ 858 ++VAINGFGRIGRNF RCW GR+++ +++V VND+ + +HLLKYDS+LG K D+ +I+V+GK IK VS+R+P LPW E ID++IE TGVFV GA KHI AGAKKV+ITAP K D T+V+GVN DYDH + NI+SNASCTTNCLAP KV++++ GI++G++TTTHSYTGDQ Sbjct: 2 IRVAINGFGRIGRNFARCWLGRENTNIELVAVNDTSDPRTNAHLLKYDSMLGKLKNVDITADDNSITVNGKTIKCVSDRNPENLPWKEWEIDLIIEATGVFVSKEGATKHINAGAKKVLITAPGKNED-GTFVMGVNHHDYDHNLHNIISNASCTTNCLAPIAKVLNDKFGIIKGSMTTTHSYTGDQ 187
BLAST of CX047566 vs. ExPASy Swiss-Prot
Match: G3P2_ANAVT (Glyceraldehyde-3-phosphate dehydrogenase 2 OS=Anabaena variabilis (strain ATCC 29413 / PCC 7937) GN=gap2 PE=3 SV=2) HSP 1 Score: 231.106 bits (588), Expect = 6.869e-60 Identity = 110/187 (58.82%), Postives = 143/187 (76.47%), Query Frame = 1 Query: 298 LKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVSNRDPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAPAKGADIPTYVVGVNEKDYDHEVANIVSNASCTTNCLAPFVKVMDEELGIVQGAITTTHSYTGDQ 858 ++VAINGFGRIGRNF RCW GR++S +++V VND+ + +HLLKYDS+LG K D+ +I+V+GK IK VS+R+P LPW E ID++IE TGVF GA KH+ AGAKKV+ITAP K D T+V+GVN DYDH V +I+SNASCTTNCLAP KV++++ GI++G++TTTHSYTGDQ Sbjct: 2 IRVAINGFGRIGRNFARCWLGRENSNIELVAVNDTSDPRTNAHLLKYDSMLGKLKNVDITADDNSITVNGKTIKCVSDRNPENLPWKEWEIDLIIESTGVFTSKEGALKHVNAGAKKVLITAPGKNED-GTFVIGVNHHDYDHNVHHIISNASCTTNCLAPIAKVLNDKFGIIKGSMTTTHSYTGDQ 187
BLAST of CX047566 vs. ExPASy Swiss-Prot
Match: G3P_AQUAE (Glyceraldehyde-3-phosphate dehydrogenase OS=Aquifex aeolicus GN=gap PE=1 SV=1) HSP 1 Score: 209.92 bits (533), Expect = 1.639e-53 Identity = 106/187 (56.68%), Postives = 138/187 (73.80%), Query Frame = 1 Query: 298 LKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVSNRDPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAPAKGADIPTYVVGVNEKDYDHEVANIVSNASCTTNCLAPFVKVMDEELGIVQGAITTTHSYTGDQ 858 +KV INGFGRIGR+F R GR++ +++V +ND K+ +HLLKYDS+ G FK V+ D ++I VDGK IKV + +DP Q+PW +LG+D+VIE TGVF D A KH+Q GAKKVIITAPAK DI T V+GVNE+ Y+ + NI+SNASCTTNCLAP VKV++E G+ +G + T H+YT DQ Sbjct: 3 IKVGINGFGRIGRSFFRASWGREE--IEIVAINDLTDAKHLAHLLKYDSVHGIFKGSVEAKD-DSIVVDGKEIKVFAQKDPSQIPWGDLGVDVVIEATGVFRDRENASKHLQGGAKKVIITAPAKNPDI-TVVLGVNEEKYNPKEHNIISNASCTTNCLAPCVKVLNEAFGVEKGYMVTVHAYTNDQ 185
BLAST of CX047566 vs. ExPASy Swiss-Prot
Match: G3P_STRCO (Glyceraldehyde-3-phosphate dehydrogenase OS=Streptomyces coelicolor GN=gap PE=3 SV=1) HSP 1 Score: 204.912 bits (520), Expect = 5.272e-52 Identity = 102/187 (54.55%), Postives = 134/187 (71.66%), Query Frame = 1 Query: 298 LKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVSNRDPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAPAKGADIPTYVVGVNEKDYDHEVANIVSNASCTTNCLAPFVKVMDEELGIVQGAITTTHSYTGDQ 858 ++V INGFGRIGRN+ R + + +++V VND G +HLLKYD++LG KA+V + +TI+VDGK IKV+S R+P +PW ELG+DIVIE TG+F A KHI GAKKV+I+APAK DI T V+GVN+ YD +++SNASCTTNC+AP KV+DE GIV+G +TT H+YT DQ Sbjct: 3 IRVGINGFGRIGRNYFRALL-EQGADIEIVAVNDLGDTATTAHLLKYDTILGRLKAEVSHTE-DTITVDGKTIKVLSERNPADIPWGELGVDIVIESTGIFTKKADAEKHIAGGAKKVLISAPAKDEDI-TIVMGVNQDKYDPANHHVISNASCTTNCVAPMAKVLDENFGIVKGLMTTVHAYTNDQ 186
BLAST of CX047566 vs. ExPASy Swiss-Prot
Match: G3P_BACST (Glyceraldehyde-3-phosphate dehydrogenase OS=Bacillus stearothermophilus GN=gap PE=1 SV=5) HSP 1 Score: 193.741 bits (491), Expect = 1.215e-48 Identity = 101/187 (54.01%), Postives = 128/187 (68.45%), Query Frame = 1 Query: 298 LKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVSNRDPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAPAKGADIPTYVVGVNEKDYDHEVANIVSNASCTTNCLAPFVKVMDEELGIVQGAITTTHSYTGDQ 858 +KV INGFGRIGRN R K+ ++VV VND +HLLKYDS+ G A+V + N + V+GK I V + RDP L W E+G+DIV+E TG F A KH++AGAKKVII+APAK DI T V+GVN+ YD + +++SNASCTTNCLAPF KV+ E+ GIV+G +TT HSYT DQ Sbjct: 3 VKVGINGFGRIGRNVFRA--ALKNPDIEVVAVNDLTDANTLAHLLKYDSVHGRLDAEVSVNGNNLV-VNGKEIIVKAERDPENLAWGEIGVDIVVESTGRFTKREDAAKHLEAGAKKVIISAPAKNEDI-TIVMGVNQDKYDPKAHHVISNASCTTNCLAPFAKVLHEQFGIVRGMMTTVHSYTNDQ 185
BLAST of CX047566 vs. ExPASy Swiss-Prot
Match: G3P1_BACCE (Glyceraldehyde-3-phosphate dehydrogenase 1 OS=Bacillus cereus GN=gap1 PE=1 SV=3) HSP 1 Score: 190.66 bits (483), Expect = 1.029e-47 Identity = 97/186 (52.15%), Postives = 128/186 (68.82%), Query Frame = 1 Query: 301 KVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVSNRDPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAPAKGADIPTYVVGVNEKDYDHEVANIVSNASCTTNCLAPFVKVMDEELGIVQGAITTTHSYTGDQ 858 K+ INGFGRIGRN R +S ++VV +ND K +HLLKYD++ GT A+V +N +I V+GK IKV++ RDP QLPW++ G+++V+E TG F A KH+ KKVII+APA DI T V+GVN + YD N+VSNASCTTNCLAPF KV++E+ G+ +G +TT HSYT DQ Sbjct: 3 KIGINGFGRIGRNVFRA--ALNNSEVEVVAINDLTDAKTLAHLLKYDTVHGTLNAEVSANEN-SIVVNGKEIKVIAERDPAQLPWSDYGVEVVVESTGRFTKKSDAEKHLGGSVKKVIISAPASDEDI-TVVMGVNHEQYDAANHNVVSNASCTTNCLAPFAKVLNEKFGVKRGMMTTIHSYTNDQ 184 The following BLAST results are available for this feature:
BLAST of CX047566 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 348
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CX047566 ID=CX047566; Name=CX047566; organism=Citrus sinensis; type=EST; length=917bpback to top |