CX047565

Overview
NameCX047565
Unique NameCX047565
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length776
Libraries
Library NameType
Ruby Orange Developing Seed cDNA Library UCRCS09cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX047565 vs. ExPASy Swiss-Prot
Match: G3PC_MAIZE (Glyceraldehyde-3-phosphate dehydrogenase, cytosolic 1 OS=Zea mays GN=GAPC1 PE=2 SV=2)

HSP 1 Score: 156.762 bits (395), Expect = 1.251e-37
Identity = 88/192 (45.83%), Postives = 111/192 (57.81%), Query Frame = -1
Query:  183 NIVSNASCTTNCLAPFVKVMDEELGIVKGAITTTHSYTGDQXXXXXXXXXXXXXXXXXL-NIVPTSTGAAKAVSLVLPQLKGKLNGIALRXXXXXXXXXXXXXXVEKKGITAEDVNAAFRKAAEGPLKGILAVCDVPLVSVDFRCSDVSSTIDSSLTMVMGDDMVKVVAWYDNEWGYSQRVVDL-AHLVATK 752
            NIVSNASCTTNCLAP  KV+ +  GIV+G +TT H+ T  Q                   NI+P+STGAAKAV  VLP L GKL G++ R              +EK G + ED+  A + A+EGPLKGI+   +  LVS DF     SS  D+   + + D  VK+V+WYDNEWGYS RVVDL  H+  T+
Sbjct:  147 NIVSNASCTTNCLAPLAKVIHDNFGIVEGLMTTVHAITATQKTVDGPSAKDWRGGRAASFNIIPSSTGAAKAVGKVLPDLNGKLTGMSFRVPTVDVSVVDLTVRIEK-GASYEDIKKAIKAASEGPLKGIMGYVEEDLVSTDFLGDSRSSIFDAKAGIALNDHFVKLVSWYDNEWGYSNRVVDLIRHMFKTQ 337          
BLAST of CX047565 vs. ExPASy Swiss-Prot
Match: G3P_PODAN (Glyceraldehyde-3-phosphate dehydrogenase OS=Podospora anserina GN=GPD PE=3 SV=1)

HSP 1 Score: 155.606 bits (392), Expect = 2.787e-37
Identity = 87/197 (44.16%), Postives = 118/197 (59.90%), Query Frame = -1
Query:  189 KDYDHEVANIVSNASCTTNCLAPFVKVMDEELGIVKGAITTTHSYTGDQXXXXXXXXXXXXXXXXXL-NIVPTSTGAAKAVSLVLPQLKGKLNGIALRXXXXXXXXXXXXXXVEKKGITAEDVNAAFRKAAEGPLKGILAVCDVPLVSVDFRCSDVSSTIDSSLTMVMGDDMVKVVAWYDNEWGYSQRVVDLAHLVA 776
            K YD + A ++SNASCTTNCLAP  KV++++ GIV+G +TT HSYT  Q                   NI+P+STGAAKAV  V+P+L GKL G+A R              +EK   + E + AA ++A+EG LKGIL   +  +VS D   +  SS  D+   + + D+ VK+V+WYDNEWGYS+RV+DL   VA
Sbjct:  137 KTYDGKAA-VISNASCTTNCLAPLAKVVNDKFGIVEGLMTTVHSYTATQKTVDGPSAKDWRGGRGAAQNIIPSSTGAAKAVGKVIPELNGKLTGMAFRVPTSNVSVVDLTCRLEKPA-SYETIKAALKEASEGELKGILGYTEDEIVSSDLNGNANSSIFDAKAGISLNDNFVKLVSWYDNEWGYSRRVLDLLSYVA 331          
BLAST of CX047565 vs. ExPASy Swiss-Prot
Match: G3PD_MAIZE (Glyceraldehyde-3-phosphate dehydrogenase, cytosolic 2 OS=Zea mays GN=GAPC2 PE=2 SV=1)

HSP 1 Score: 155.606 bits (392), Expect = 2.787e-37
Identity = 85/192 (44.27%), Postives = 112/192 (58.33%), Query Frame = -1
Query:  183 NIVSNASCTTNCLAPFVKVMDEELGIVKGAITTTHSYTGDQXXXXXXXXXXXXXXXXXL-NIVPTSTGAAKAVSLVLPQLKGKLNGIALRXXXXXXXXXXXXXXVEKKGITAEDVNAAFRKAAEGPLKGILAVCDVPLVSVDFRCSDVSSTIDSSLTMVMGDDMVKVVAWYDNEWGYSQRVVDL-AHLVATK 752
            NIVSNASCTTNCLAP  KV+ +  GI++G +TT H+ T  Q                   NI+P+STGAAKAV  VLP+L GKL G++ R              +EK G + E++  A + A+EGPLKGI+   +  LVS DF     SS  D+   + + D  +K+V+WYDNEWGYS RVVDL  H+  T+
Sbjct:  147 NIVSNASCTTNCLAPLAKVIHDNFGIIEGLMTTVHAITATQKTVDGPSAKDWRGGRAASFNIIPSSTGAAKAVGKVLPELNGKLTGMSFRVPTVDVSVVDLTVRIEK-GASYEEIKKAIKAASEGPLKGIMGYVEEDLVSTDFTGDSRSSIFDAKAGIALNDHFIKLVSWYDNEWGYSNRVVDLIRHMFKTQ 337          
BLAST of CX047565 vs. ExPASy Swiss-Prot
Match: G3PC_PINSY (Glyceraldehyde-3-phosphate dehydrogenase, cytosolic OS=Pinus sylvestris GN=GAPC PE=2 SV=1)

HSP 1 Score: 155.606 bits (392), Expect = 2.787e-37
Identity = 88/192 (45.83%), Postives = 113/192 (58.85%), Query Frame = -1
Query:  183 NIVSNASCTTNCLAPFVKVMDEELGIVKGAITTTHSYTGDQXXXXXXXXXXXXXXXXXL-NIVPTSTGAAKAVSLVLPQLKGKLNGIALRXXXXXXXXXXXXXXVEKKGITAEDVNAAFRKAAEGPLKGILAVCDVPLVSVDFRCSDVSSTIDSSLTMVMGDDMVKVVAWYDNEWGYSQRVVDL-AHLVATK 752
            NIVSNASCTTNCLAP  KV++++ GIV+G +TT HS T  Q                   NI+P+STGAAKAV  VLP L GKL G+A R              +EK   T +++ AA +  +EG LKGIL   +  +VS DF     SS  D+   + + D+ VK+V+WYDNEWGYS RVVDL  H+ AT+
Sbjct:  150 NIVSNASCTTNCLAPLAKVINDKFGIVEGLMTTVHSITATQKTVDGPSNKDWRGGRGAGFNIIPSSTGAAKAVGKVLPALNGKLTGMAFRVPTPDVSVVDLTVRLEKSA-TYDEIKAAIKAESEGNLKGILGYTEDAVVSTDFIGDSRSSIFDAQAGIALSDNFVKLVSWYDNEWGYSSRVVDLIVHMAATQ 340          
BLAST of CX047565 vs. ExPASy Swiss-Prot
Match: G3PC_ANTMA (Glyceraldehyde-3-phosphate dehydrogenase, cytosolic OS=Antirrhinum majus GN=GAPC PE=2 SV=1)

HSP 1 Score: 155.606 bits (392), Expect = 2.787e-37
Identity = 88/192 (45.83%), Postives = 114/192 (59.38%), Query Frame = -1
Query:  204 KDYDHEVANIVSNASCTTNCLAPFVKVMDEELGIVKGAITTTHSYTGDQXXXXXXXXXXXXXXXXXL-NIVPTSTGAAKAVSLVLPQLKGKLNGIALRXXXXXXXXXXXXXXVEKKGITAEDVNAAFRKAAEGPLKGILAVCDVPLVSVDFRCSDVSSTIDSSLTMVMGDDMVKVVAWYDNEWGYSQRVVDL 776
            K+Y  ++ +IVSNASCTTNCLAP  KV+++  GIV+G +TT HS T  Q                   NI+P+STGAAKAV  VLPQL GKL G++ R              +EKK  T E + AA ++ +EG LKGIL   +  +VS DF     SS  D+   + + D+ VK+V+WYDNEWGYS RVVDL
Sbjct:  140 KEYKSDL-HIVSNASCTTNCLAPLAKVINDRFGIVEGLMTTVHSITATQKTVDGPSAKDWRGGRAASFNIIPSSTGAAKAVGKVLPQLNGKLTGMSFRVPTVDVSVVDLTVRLEKKA-TYEQIKAAIKEESEGKLKGILGYTEDDVVSTDFVGDSRSSIFDAKAGIALNDNFVKLVSWYDNEWGYSTRVVDL 329          
BLAST of CX047565 vs. ExPASy Swiss-Prot
Match: G3P3_CAEEL (Glyceraldehyde-3-phosphate dehydrogenase 3 OS=Caenorhabditis elegans GN=gpd-3 PE=2 SV=1)

HSP 1 Score: 155.606 bits (392), Expect = 2.787e-37
Identity = 84/197 (42.64%), Postives = 114/197 (57.87%), Query Frame = -1
Query:  183 YDHEVANIVSNASCTTNCLAPFVKVMDEELGIVKGAITTTHSYTGDQXXXXXXXXXXXXXXXXXL-NIVPTSTGAAKAVSLVLPQLKGKLNGIALRXXXXXXXXXXXXXXVEKKGITAEDVNAAFRKAAEGPLKGILAVCDVPLVSVDFRCSDVSSTIDSSLTMVMGDDMVKVVAWYDNEWGYSQRVVDLAHLVATK 770
            YDH   +I+SNASCTTNCLAP  KV+++  GI++G +TT H+ T  Q                   NI+P STGAAKAV  V+P+L GKL G+A R              +EK   + +D+    + AA+GP+KGILA  +  +VS DF     SS  D+  ++ +    VK+V+WYDNE+GYS RVVDL   +ATK
Sbjct:  145 YDHANDHIISNASCTTNCLAPLAKVINDNFGIIEGLMTTVHAVTATQKTVDGPSGKLWRDGRGAGQNIIPASTGAAKAVGKVIPELNGKLTGMAFRVPTPDVSVVDLTARLEKPA-SLDDIKKVIKAAADGPMKGILAYTEDQVVSTDFVSDTNSSIFDAGASISLNPHFVKLVSWYDNEFGYSNRVVDLISYIATK 340          
BLAST of CX047565 vs. ExPASy Swiss-Prot
Match: G3P2_CAEEL (Glyceraldehyde-3-phosphate dehydrogenase 2 OS=Caenorhabditis elegans GN=gpd-2 PE=1 SV=2)

HSP 1 Score: 155.606 bits (392), Expect = 2.787e-37
Identity = 84/197 (42.64%), Postives = 114/197 (57.87%), Query Frame = -1
Query:  183 YDHEVANIVSNASCTTNCLAPFVKVMDEELGIVKGAITTTHSYTGDQXXXXXXXXXXXXXXXXXL-NIVPTSTGAAKAVSLVLPQLKGKLNGIALRXXXXXXXXXXXXXXVEKKGITAEDVNAAFRKAAEGPLKGILAVCDVPLVSVDFRCSDVSSTIDSSLTMVMGDDMVKVVAWYDNEWGYSQRVVDLAHLVATK 770
            YDH   +I+SNASCTTNCLAP  KV+++  GI++G +TT H+ T  Q                   NI+P STGAAKAV  V+P+L GKL G+A R              +EK   + +D+    + AA+GP+KGILA  +  +VS DF     SS  D+  ++ +    VK+V+WYDNE+GYS RVVDL   +ATK
Sbjct:  145 YDHANDHIISNASCTTNCLAPLAKVINDNFGIIEGLMTTVHAVTATQKTVDGPSGKLWRDGRGAGQNIIPASTGAAKAVGKVIPELNGKLTGMAFRVPTPDVSVVDLTARLEKPA-SLDDIKKVIKAAADGPMKGILAYTEDQVVSTDFVSDTNSSIFDAGASISLNPHFVKLVSWYDNEFGYSNRVVDLISYIATK 340          
BLAST of CX047565 vs. ExPASy Swiss-Prot
Match: G3P_COLGL (Glyceraldehyde-3-phosphate dehydrogenase OS=Colletotrichum gloeosporioides GN=GPDA PE=2 SV=1)

HSP 1 Score: 155.221 bits (391), Expect = 3.640e-37
Identity = 85/197 (43.15%), Postives = 121/197 (61.42%), Query Frame = -1
Query:  189 KDYDHEVANIVSNASCTTNCLAPFVKVMDEELGIVKGAITTTHSYTGDQXXXXXXXXXXXXXXXXXL-NIVPTSTGAAKAVSLVLPQLKGKLNGIALRXXXXXXXXXXXXXXVEKKGITAEDVNAAFRKAAEGPLKGILAVCDVPLVSVDFRCSDVSSTIDSSLTMVMGDDMVKVVAWYDNEWGYSQRVVDLAHLVA 776
            K YD   A+++SNASCTTNCLAP  KV++++ GIV+G +TT HSYT  Q                   NI+P+STGAAKAV  V+P+L GKL  +++R              +EK G + +++  A ++AAEGPLKG+LA  +  +VS D   +  SS  D+   + + ++ VK+V+WYDNEWGYS+RV+DL   VA
Sbjct:  138 KSYDGS-ADVISNASCTTNCLAPLAKVINDKFGIVEGLMTTVHSYTATQKTVHGPSAKDWRGGRTAAQNIIPSSTGAAKAVGKVIPELNGKLTDMSMRVPTTNVSVVDLTARIEK-GASYDEIKQAIKEAAEGPLKGVLAYTEDDVVSTDMIGNPNSSIFDAKAGISLNNNFVKLVSWYDNEWGYSRRVLDLLAHVA 332          
BLAST of CX047565 vs. ExPASy Swiss-Prot
Match: G3P_AJECA (Glyceraldehyde-3-phosphate dehydrogenase OS=Ajellomyces capsulata GN=GPD PE=2 SV=1)

HSP 1 Score: 154.836 bits (390), Expect = 4.754e-37
Identity = 84/197 (42.64%), Postives = 113/197 (57.36%), Query Frame = -1
Query:  189 KDYDHEVANIVSNASCTTNCLAPFVKVMDEELGIVKGAITTTHSYTGDQXXXXXXXXXXXXXXXXXL-NIVPTSTGAAKAVSLVLPQLKGKLNGIALRXXXXXXXXXXXXXXVEKKGITAEDVNAAFRKAAEGPLKGILAVCDVPLVSVDFRCSDVSSTIDSSLTMVMGDDMVKVVAWYDNEWGYSQRVVDLAHLVA 776
            K YD  V N++SNASCTTNCLAP  KV+++  G+ +G +TT HSYT  Q                   NI+P+STGAAKAV  V+P L GKL G+++R               EK  +T + +    +KA+EG LKGIL   +  LVS D      SS  D+S  + + D  +K+++WYDNEWGYS+RVVDL   +A
Sbjct:  137 KTYDPSV-NVLSNASCTTNCLAPLAKVINDNFGLTEGLMTTIHSYTATQKTVDGPSSKDWRGGRTAAQNIIPSSTGAAKAVGKVIPSLNGKLTGMSMRVPTANVSVVDLTCKTEKP-VTYDQIKQTIKKASEGELKGILGYSEDALVSSDLNGDSRSSIFDASAGIALNDHFIKLISWYDNEWGYSRRVVDLIAYIA 331          
BLAST of CX047565 vs. ExPASy Swiss-Prot
Match: G3PE_MAIZE (Glyceraldehyde-3-phosphate dehydrogenase, cytosolic 3 OS=Zea mays GN=GAPC3 PE=2 SV=1)

HSP 1 Score: 154.836 bits (390), Expect = 4.754e-37
Identity = 89/200 (44.50%), Postives = 118/200 (59.00%), Query Frame = -1
Query:  183 KDYDHEVANIVSNASCTTNCLAPFVKVMDEELGIVKGAITTTHSYTGDQXXXXXXXXXXXXXXXXXL-NIVPTSTGAAKAVSLVLPQLKGKLNGIALRXXXXXXXXXXXXXXVEKKGITAEDVNAAFRKAAEGPLKGILAVCDVPLVSVDFRCSDVSSTIDSSLTMVMGDDMVKVVAWYDNEWGYSQRVVDL-AHLVATK 776
            K+Y  ++ NIVSNASCTTNCLAP  KV++++ GIV+G +TT H+ T  Q                   NI+P+STGAAKAV  VLP L GKL G++ R              +EK   T +++ AA +  AEG LKGIL   +  LVS DF+    SS  D+   + +  + VK+V+WYDNEWGYS RVVDL  H+ +TK
Sbjct:  140 KEYKSDI-NIVSNASCTTNCLAPLAKVINDKFGIVEGLMTTVHAITATQKTVDGPSSKDWRGGRAASFNIIPSSTGAAKAVGKVLPVLNGKLTGMSFRVPTVDVSVVDLTVRLEKSA-TYDEIKAAVKAEAEGSLKGILGYVEEDLVSTDFQGDSRSSIFDAKAGIALNGNFVKLVSWYDNEWGYSTRVVDLIRHMNSTK 337          
The following BLAST results are available for this feature:
BLAST of CX047565 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 349
Match NameE-valueIdentityDescription
G3PC_MAIZE1.251e-3745.83Glyceraldehyde-3-phosphate dehydrogenase, cytosoli... [more]
G3P_PODAN2.787e-3744.16Glyceraldehyde-3-phosphate dehydrogenase OS=Podosp... [more]
G3PD_MAIZE2.787e-3744.27Glyceraldehyde-3-phosphate dehydrogenase, cytosoli... [more]
G3PC_PINSY2.787e-3745.83Glyceraldehyde-3-phosphate dehydrogenase, cytosoli... [more]
G3PC_ANTMA2.787e-3745.83Glyceraldehyde-3-phosphate dehydrogenase, cytosoli... [more]
G3P3_CAEEL2.787e-3742.64Glyceraldehyde-3-phosphate dehydrogenase 3 OS=Caen... [more]
G3P2_CAEEL2.787e-3742.64Glyceraldehyde-3-phosphate dehydrogenase 2 OS=Caen... [more]
G3P_COLGL3.640e-3743.15Glyceraldehyde-3-phosphate dehydrogenase OS=Collet... [more]
G3P_AJECA4.754e-3742.64Glyceraldehyde-3-phosphate dehydrogenase OS=Ajello... [more]
G3PE_MAIZE4.754e-3744.50Glyceraldehyde-3-phosphate dehydrogenase, cytosoli... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS09_14H07_g Ruby Orange Developing Seed cDNA Library UCRCS09 Citrus sinensis cDNA clone UCRCS09-14H07-P13-1-4.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX047565 ID=CX047565; Name=CX047565; organism=Citrus sinensis; type=EST; length=776bp
CTCAGTTGTCATTAATATAAAAGCATTTTGTGACAAAGGCTGCGAAAAAC
CTATGTAATTAATTAGCCAACCAATTAAGAAAGAATTTAAGCTTCATAAA
CTTTGCACTCCTCATCAGCAGGGTTTGTCTGGCAGAAATCCTCCAATGGG
TCTCCGCTTCCGCCTGCAGCCACGCCTGGCCACTTGGTTGCAACCAAATG
CGCCAAATCGACAACCCTTTGGCTGTATCCCCATTCATTGTCGTACCAGG
CAACAACCTTGACCATATCATCACCCATGACCATGGTCAATGAAGAGTCA
ATGGTGGAGGAAACATCAGAGCATCGGAAGTCCACCGACACCAGTGGAAC
ATCGCAGACGGCCAATATGCCCTTCAGTGGCCCCTCAGCAGCCTTTCTGA
AGGCTGCATTAACATCTTCTGCTGTAATACCCTTTTTCTCAACGTTCACA
ACAAGGTCAACGACTGAAACATTTGGTGTTGGCACACGGAGCGCAATGCC
GTTGAGCTTGCCTTTGAGCTGTGGCAGCACAAGAGAAACAGCCTTGGCGG
CACCTGTGCTCGTTGGGACAATGTTCAACGCTGCAGCTCTCGCTCTCCTC
AAGTCCCTGTGTGAAGCATCCAAGAGCCTCTGGTCTCCAGTGTAGGAGTG
AGTAGTTGTAATCGCTCCCTTGACAATCCCCAATTCTTCATCCATGACCT
TCACAAAAGGAGCCAAACAGTTTGTGGTGCAAGAAGCATTGCTCACAATG
TTTGCAACCTCGTGATCGTAATCCTT
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