CX047565

Overview
NameCX047565
Unique NameCX047565
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length776
Libraries
Library NameType
Ruby Orange Developing Seed cDNA Library UCRCS09cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX047565 vs. ExPASy Swiss-Prot
Match: G3P_OMPOL (Glyceraldehyde-3-phosphate dehydrogenase OS=Omphalotus olearius GN=GPD PE=3 SV=1)

HSP 1 Score: 150.984 bits (380), Expect = 6.864e-36
Identity = 83/189 (43.92%), Postives = 112/189 (59.26%), Query Frame = -1
Query:  183 VSNASCTTNCLAPFVKVMDEELGIVKGAITTTHSYTGDQXXXXXXXXXXXXXXXXXLN-IVPTSTGAAKAVSLVLPQLKGKLNGIALRXXXXXXXXXXXXXXVEKKGITAEDVNAAFRKAAEGPLKGILAVCDVPLVSVDFRCSDVSSTIDSSLTMVMGDDMVKVVAWYDNEWGYSQRVVDLAHLVATK 746
            +SNASCTTNCLAP  KV+ ++ GIV+G ++T H+ T  Q                  N I+P+STGAAKAV  V+P L GKL G++ R              +EK+  T +++ AA ++A  GPLKGIL   +  LVS DF  +  SS  D+S  + +  + VK++AWYDNEWGYS+RVVDL   VA K
Sbjct:  146 ISNASCTTNCLAPLAKVIHDKFGIVEGLMSTIHATTATQKTVDGPSNKDWRGGRSVNNNIIPSSTGAAKAVGKVIPSLNGKLTGLSFRVPTLDVSVVDLVVRLEKEA-TYDEIKAAVKEAVAGPLKGILDYTEDALVSTDFTGNTHSSIFDASAGIALNKNFVKLIAWYDNEWGYSRRVVDLITFVAQK 333          
BLAST of CX047565 vs. ExPASy Swiss-Prot
Match: G3P_MUSPF (Glyceraldehyde-3-phosphate dehydrogenase OS=Mustela putorius furo GN=GAPDH PE=2 SV=1)

HSP 1 Score: 150.984 bits (380), Expect = 6.864e-36
Identity = 85/197 (43.15%), Postives = 113/197 (57.36%), Query Frame = -1
Query:  183 YDHEVANIVSNASCTTNCLAPFVKVMDEELGIVKGAITTTHSYTGDQXXXXXXXXXXXXXXXXXL-NIVPTSTGAAKAVSLVLPQLKGKLNGIALRXXXXXXXXXXXXXXVEKKGITAEDVNAAFRKAAEGPLKGILAVCDVPLVSVDFRCSDVSSTIDSSLTMVMGDDMVKVVAWYDNEWGYSQRVVDLAHLVATK 770
            YD+ +  IVSNASCTTNCLAP  KV+ +  GIV+G +TT H+ T  Q                   NI+P STGAAKAV  V+P+L GKL G+A R              +EK     +D+    ++A+EGPLKGIL   +  +VS DF     SST D+   + + D  VK+++WYDNE+GYS RVVDL   +A+K
Sbjct:  138 YDNSL-KIVSNASCTTNCLAPLAKVIHDNFGIVEGLMTTVHAITATQKTVDGPSGKLWRDGRGAAQNIIPASTGAAKAVGKVIPELNGKLTGMAFRVPTPNVSVVDLTCRLEKAA-KYDDIKKVVKQASEGPLKGILGYTEDQVVSCDFNSDTHSSTFDAGAGIALNDHFVKLISWYDNEFGYSNRVVDLMVYMASK 332          
BLAST of CX047565 vs. ExPASy Swiss-Prot
Match: G3P_CANFA (Glyceraldehyde-3-phosphate dehydrogenase OS=Canis familiaris GN=GAPDH PE=2 SV=3)

HSP 1 Score: 150.984 bits (380), Expect = 6.864e-36
Identity = 85/197 (43.15%), Postives = 113/197 (57.36%), Query Frame = -1
Query:  183 YDHEVANIVSNASCTTNCLAPFVKVMDEELGIVKGAITTTHSYTGDQXXXXXXXXXXXXXXXXXL-NIVPTSTGAAKAVSLVLPQLKGKLNGIALRXXXXXXXXXXXXXXVEKKGITAEDVNAAFRKAAEGPLKGILAVCDVPLVSVDFRCSDVSSTIDSSLTMVMGDDMVKVVAWYDNEWGYSQRVVDLAHLVATK 770
            YD+ +  IVSNASCTTNCLAP  KV+ +  GIV+G +TT H+ T  Q                   NI+P STGAAKAV  V+P+L GKL G+A R              +EK     +D+    ++A+EGPLKGIL   +  +VS DF     SST D+   + + D  VK+++WYDNE+GYS RVVDL   +A+K
Sbjct:  138 YDNSL-KIVSNASCTTNCLAPLAKVIHDHFGIVEGLMTTVHAITATQKTVDGPSGKMWRDGRGAAQNIIPASTGAAKAVGKVIPELNGKLTGMAFRVPTPNVSVVDLTCRLEKAA-KYDDIKKVVKQASEGPLKGILGYTEDQVVSCDFNSDTHSSTFDAGAGIALNDHFVKLISWYDNEFGYSNRVVDLMVYMASK 332          
BLAST of CX047565 vs. ExPASy Swiss-Prot
Match: G3PC_SINAL (Glyceraldehyde-3-phosphate dehydrogenase, cytosolic OS=Sinapis alba GN=GAPC PE=2 SV=2)

HSP 1 Score: 150.984 bits (380), Expect = 6.864e-36
Identity = 83/184 (45.11%), Postives = 109/184 (59.24%), Query Frame = -1
Query:  204 NIVSNASCTTNCLAPFVKVMDEELGIVKGAITTTHSYTGDQXXXXXXXXXXXXXXXXXL-NIVPTSTGAAKAVSLVLPQLKGKLNGIALRXXXXXXXXXXXXXXVEKKGITAEDVNAAFRKAAEGPLKGILAVCDVPLVSVDFRCSDVSSTIDSSLTMVMGDDMVKVVAWYDNEWGYSQRVVDL 752
            NIVSNASCTTNCLAP  KV+++  GIV+G +TT HS T  Q                   NI+P+STGAAKAV  VLPQL GKL G++ R              +EK   T +++  A ++ ++G LKGIL   +  +VS DF   + SS  D+   + + D+ VK+V+WYDNEWGYS RVVDL
Sbjct:  149 NIVSNASCTTNCLAPLAKVINDRFGIVEGLMTTVHSITATQKTVDGPSMKDWRGGRAASFNIIPSSTGAAKAVGKVLPQLNGKLTGMSFRVPTVDVSVVDLTVRLEKAA-TYDEIKKAIKEESQGKLKGILGYTEDDVVSTDFVGDNRSSIFDAKAGIALSDNFVKLVSWYDNEWGYSTRVVDL 331          
BLAST of CX047565 vs. ExPASy Swiss-Prot
Match: G3PC_MESCR (Glyceraldehyde-3-phosphate dehydrogenase, cytosolic OS=Mesembryanthemum crystallinum GN=GAPC PE=2 SV=1)

HSP 1 Score: 150.984 bits (380), Expect = 6.864e-36
Identity = 85/184 (46.20%), Postives = 108/184 (58.70%), Query Frame = -1
Query:  204 NIVSNASCTTNCLAPFVKVMDEELGIVKGAITTTHSYTGDQXXXXXXXXXXXXXXXXXL-NIVPTSTGAAKAVSLVLPQLKGKLNGIALRXXXXXXXXXXXXXXVEKKGITAEDVNAAFRKAAEGPLKGILAVCDVPLVSVDFRCSDVSSTIDSSLTMVMGDDMVKVVAWYDNEWGYSQRVVDL 752
            NIVSNASCTTNCLAP  KV+++  GIV+G +TT H+ T  Q                   NI+P+STGAAKAV  VLP L GKL G+A R              +EK   + E + AA ++ +EG LKGIL   +  LVS DF   + SS  D+   + + D+ VK+V+WYDNEWGYS RVVDL
Sbjct:  147 NIVSNASCTTNCLAPLAKVINDRFGIVEGLMTTVHAMTATQKTVDGPSMKDWRGGRAASFNIIPSSTGAAKAVGKVLPALNGKLTGMAFRVPTCDVSVVDLTVRIEKAA-SYEQIKAAIKEESEGKLKGILGYTEDDLVSTDFIGDNRSSIFDAKAGISLNDNFVKLVSWYDNEWGYSTRVVDL 329          
BLAST of CX047565 vs. ExPASy Swiss-Prot
Match: G3PC_GINBI (Glyceraldehyde-3-phosphate dehydrogenase, cytosolic OS=Ginkgo biloba PE=2 SV=1)

HSP 1 Score: 150.984 bits (380), Expect = 6.864e-36
Identity = 86/198 (43.43%), Postives = 117/198 (59.09%), Query Frame = -1
Query:  186 DYDHEVANIVSNASCTTNCLAPFVKVMDEELGIVKGAITTTHSYTGDQXXXXXXXXXXXXXXXXXL-NIVPTSTGAAKAVSLVLPQLKGKLNGIALRXXXXXXXXXXXXXXVEKKGITAEDVNAAFRKAAEGPLKGILAVCDVPLVSVDFRCSDVSSTIDSSLTMVMGDDMVKVVAWYDNEWGYSQRVVDL-AHLVAT 773
            +Y  ++A IVSNASCTTNCLAP  KV+++  GIV+G +TT HS T  Q                   NI+P+STGAAKAV  VLP L GKL G+A R              +EK   + +++ AA ++ +EG LKGIL   +  +VS DF   + SS  D+   + + D+ VK+V+WYDNEWGYS RV+DL  H+ +T
Sbjct:  144 EYKPDLA-IVSNASCTTNCLAPLAKVINDRFGIVEGLMTTVHSITATQKTVDGPSNKDWRGGRGAGFNIIPSSTGAAKAVGKVLPALNGKLTGMAFRVPTPDVSVVDLTVRLEKPA-SYDEIKAAIKEESEGKLKGILGYTEDDVVSTDFIGDNRSSIFDAKAGIALSDNFVKLVSWYDNEWGYSSRVIDLIVHMAST 339          
BLAST of CX047565 vs. ExPASy Swiss-Prot
Match: G3P_RABIT (Glyceraldehyde-3-phosphate dehydrogenase OS=Oryctolagus cuniculus GN=GAPDH PE=1 SV=3)

HSP 1 Score: 150.599 bits (379), Expect = 8.965e-36
Identity = 85/197 (43.15%), Postives = 114/197 (57.87%), Query Frame = -1
Query:  183 YDHEVANIVSNASCTTNCLAPFVKVMDEELGIVKGAITTTHSYTGDQXXXXXXXXXXXXXXXXXL-NIVPTSTGAAKAVSLVLPQLKGKLNGIALRXXXXXXXXXXXXXXVEKKGITAEDVNAAFRKAAEGPLKGILAVCDVPLVSVDFRCSDVSSTIDSSLTMVMGDDMVKVVAWYDNEWGYSQRVVDLAHLVATK 770
            YD+ +  IVSNASCTTNCLAP  KV+ +  GIV+G +TT H+ T  Q                   NI+P STGAAKAV  V+P+L GKL G+A R              +EK     +D+    ++A+EGPLKGIL   +  +VS DF  +  SST D+   + + D  VK+++WYDNE+GYS RVVDL   +A+K
Sbjct:  138 YDNSL-KIVSNASCTTNCLAPLAKVIHDHFGIVEGLMTTVHAITATQKTVDGPSGKLWRDGRGAAQNIIPASTGAAKAVGKVIPELNGKLTGMAFRVPTPNVSVVDLTCRLEKAA-KYDDIKKVVKQASEGPLKGILGYTEDQVVSCDFNSATHSSTFDAGAGIALNDHFVKLISWYDNEFGYSNRVVDLMVHMASK 332          
BLAST of CX047565 vs. ExPASy Swiss-Prot
Match: G3P_MONAN (Glyceraldehyde-3-phosphate dehydrogenase OS=Monascus anka GN=GPD1 PE=3 SV=3)

HSP 1 Score: 150.599 bits (379), Expect = 8.965e-36
Identity = 79/188 (42.02%), Postives = 112/188 (59.57%), Query Frame = -1
Query:  189 IVSNASCTTNCLAPFVKVMDEELGIVKGAITTTHSYTGDQXXXXXXXXXXXXXXXXXL-NIVPTSTGAAKAVSLVLPQLKGKLNGIALRXXXXXXXXXXXXXXVEKKGITAEDVNAAFRKAAEGPLKGILAVCDVPLVSVDFRCSDVSSTIDSSLTMVMGDDMVKVVAWYDNEWGYSQRVVDLAHLVA 749
            ++SNASCTTNCLAP  KV++++ GIV+G +TT HSYT  Q                   NI+P+STGAAKAV  V+P L GKL G+++R              +EK   T +++  A ++A+EGPLKG+L   +  +VS D      SS  D+   + +  + VK+V+WYDNEWGYS+RV+DL   +A
Sbjct:  146 VLSNASCTTNCLAPLAKVINDKFGIVEGLMTTVHSYTATQKVVDGPSNKDWRGGRTAAQNIIPSSTGAAKAVGKVIPSLNGKLTGMSMRVPTSNVSVVDLTARLEKAA-TYDEIKQAVKEASEGPLKGVLGYTEDDVVSSDLNGDPHSSIFDAKAGIALNSNFVKLVSWYDNEWGYSRRVIDLIAYIA 332          
BLAST of CX047565 vs. ExPASy Swiss-Prot
Match: G3P_FELCA (Glyceraldehyde-3-phosphate dehydrogenase OS=Felis catus GN=GAPDH PE=2 SV=3)

HSP 1 Score: 150.599 bits (379), Expect = 8.965e-36
Identity = 85/197 (43.15%), Postives = 113/197 (57.36%), Query Frame = -1
Query:  183 YDHEVANIVSNASCTTNCLAPFVKVMDEELGIVKGAITTTHSYTGDQXXXXXXXXXXXXXXXXXL-NIVPTSTGAAKAVSLVLPQLKGKLNGIALRXXXXXXXXXXXXXXVEKKGITAEDVNAAFRKAAEGPLKGILAVCDVPLVSVDFRCSDVSSTIDSSLTMVMGDDMVKVVAWYDNEWGYSQRVVDLAHLVATK 770
            YD+ +  IVSNASCTTNCLAP  KV+ +  GIV+G +TT H+ T  Q                   NI+P STGAAKAV  V+P+L GKL G+A R              +EK     +D+    ++A+EGPLKGIL   +  +VS DF     SST D+   + + D  VK+++WYDNE+GYS RVVDL   +A+K
Sbjct:  138 YDNSL-KIVSNASCTTNCLAPLAKVIHDHFGIVEGLMTTVHAITATQKTVDGPSGKLWRDGRGAAQNIIPASTGAAKAVGKVIPELNGKLTGMAFRVPTPNVSVVDLTCRLEKAA-KYDDIKKVVKQASEGPLKGILGYTEDQVVSCDFNSDTHSSTFDAGAGIALNDHFVKLISWYDNEFGYSNRVVDLMAHMASK 332          
BLAST of CX047565 vs. ExPASy Swiss-Prot
Match: G3P_COTJA (Glyceraldehyde-3-phosphate dehydrogenase OS=Coturnix coturnix japonica GN=GAPDH PE=2 SV=2)

HSP 1 Score: 150.599 bits (379), Expect = 8.965e-36
Identity = 87/197 (44.16%), Postives = 112/197 (56.85%), Query Frame = -1
Query:  183 YDHEVANIVSNASCTTNCLAPFVKVMDEELGIVKGAITTTHSYTGDQXXXXXXXXXXXXXXXXXL-NIVPTSTGAAKAVSLVLPQLKGKLNGIALRXXXXXXXXXXXXXXVEKKGITAEDVNAAFRKAAEGPLKGILAVCDVPLVSVDFRCSDVSSTIDSSLTMVMGDDMVKVVAWYDNEWGYSQRVVDLAHLVATK 770
            YD  +  IVSNASCTTNCLAP  KV+ +  GIV+G +TT H+ T  Q                   NI+P STGAAKAV  V+P+L GKL G+A R              +EK     +D+    + AAEGPLKGIL   +  +VS DF     SST D+   + + D+ VK+V+WYDNE+GYS RVVDL   +A+K
Sbjct:  138 YDKSL-KIVSNASCTTNCLAPLAKVIHDNFGIVEGLMTTVHAITATQKTVDGPSGKLWRDGRGAAQNIIPASTGAAKAVGKVIPELNGKLTGMAFRVPTPNVSVVDLTCRLEKPA-KYDDIKRVVKAAAEGPLKGILGYTEDQVVSCDFNGDSHSSTFDAGAGIALNDNFVKLVSWYDNEFGYSNRVVDLMVHMASK 332          
The following BLAST results are available for this feature:
BLAST of CX047565 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 349
Match NameE-valueIdentityDescription
G3P_OMPOL6.864e-3643.92Glyceraldehyde-3-phosphate dehydrogenase OS=Omphal... [more]
G3P_MUSPF6.864e-3643.15Glyceraldehyde-3-phosphate dehydrogenase OS=Mustel... [more]
G3P_CANFA6.864e-3643.15Glyceraldehyde-3-phosphate dehydrogenase OS=Canis ... [more]
G3PC_SINAL6.864e-3645.11Glyceraldehyde-3-phosphate dehydrogenase, cytosoli... [more]
G3PC_MESCR6.864e-3646.20Glyceraldehyde-3-phosphate dehydrogenase, cytosoli... [more]
G3PC_GINBI6.864e-3643.43Glyceraldehyde-3-phosphate dehydrogenase, cytosoli... [more]
G3P_RABIT8.965e-3643.15Glyceraldehyde-3-phosphate dehydrogenase OS=Orycto... [more]
G3P_MONAN8.965e-3642.02Glyceraldehyde-3-phosphate dehydrogenase OS=Monasc... [more]
G3P_FELCA8.965e-3643.15Glyceraldehyde-3-phosphate dehydrogenase OS=Felis ... [more]
G3P_COTJA8.965e-3644.16Glyceraldehyde-3-phosphate dehydrogenase OS=Coturn... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS09_14H07_g Ruby Orange Developing Seed cDNA Library UCRCS09 Citrus sinensis cDNA clone UCRCS09-14H07-P13-1-4.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX047565 ID=CX047565; Name=CX047565; organism=Citrus sinensis; type=EST; length=776bp
CTCAGTTGTCATTAATATAAAAGCATTTTGTGACAAAGGCTGCGAAAAAC
CTATGTAATTAATTAGCCAACCAATTAAGAAAGAATTTAAGCTTCATAAA
CTTTGCACTCCTCATCAGCAGGGTTTGTCTGGCAGAAATCCTCCAATGGG
TCTCCGCTTCCGCCTGCAGCCACGCCTGGCCACTTGGTTGCAACCAAATG
CGCCAAATCGACAACCCTTTGGCTGTATCCCCATTCATTGTCGTACCAGG
CAACAACCTTGACCATATCATCACCCATGACCATGGTCAATGAAGAGTCA
ATGGTGGAGGAAACATCAGAGCATCGGAAGTCCACCGACACCAGTGGAAC
ATCGCAGACGGCCAATATGCCCTTCAGTGGCCCCTCAGCAGCCTTTCTGA
AGGCTGCATTAACATCTTCTGCTGTAATACCCTTTTTCTCAACGTTCACA
ACAAGGTCAACGACTGAAACATTTGGTGTTGGCACACGGAGCGCAATGCC
GTTGAGCTTGCCTTTGAGCTGTGGCAGCACAAGAGAAACAGCCTTGGCGG
CACCTGTGCTCGTTGGGACAATGTTCAACGCTGCAGCTCTCGCTCTCCTC
AAGTCCCTGTGTGAAGCATCCAAGAGCCTCTGGTCTCCAGTGTAGGAGTG
AGTAGTTGTAATCGCTCCCTTGACAATCCCCAATTCTTCATCCATGACCT
TCACAAAAGGAGCCAAACAGTTTGTGGTGCAAGAAGCATTGCTCACAATG
TTTGCAACCTCGTGATCGTAATCCTT
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