CX047557

Overview
NameCX047557
Unique NameCX047557
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length832
Libraries
Library NameType
Ruby Orange Developing Seed cDNA Library UCRCS09cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX047557 vs. ExPASy Swiss-Prot
Match: DHI1L_MACFA (Hydroxysteroid 11-beta-dehydrogenase 1-like protein OS=Macaca fascicularis GN=HSD11B1L PE=2 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 8.084e-17
Identity = 62/180 (34.44%), Postives = 92/180 (51.11%), Query Frame = 1
Query:  133 VSGKVVIITGASSGIGEHLAYEYXXXXXXXXXXXXXEKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYTKGKIVVLSSAASWLTAPRMSFYNASKAALVLFFETLRVELG-SDVGVTI 669
            + G  V++TGAS+G+GE LAY Y             E  L++V    R++G+P V  I AD++  +   S+V+  ++  G LD+LV N  I  V            + +M +NF   V  T  A+P L  +KG +VV+SS    +     + Y+A+K AL  FF +LR EL   DV V I
Sbjct:   27 LQGARVLLTGASAGVGEELAYHYARLGSHLVLTAHTEALLQKVVGNCRKLGAPKVFYIAADMASPEAPESVVQFALDKLGGLDYLVLN-HIGGVPAGTRARTPQATRWLMQVNFLSYVQLTSRALPSLTDSKGSLVVVSSLLGRVPTSFSTPYSAAKFALDSFFGSLRRELDVQDVNVAI 205          
BLAST of CX047557 vs. ExPASy Swiss-Prot
Match: DHG2_BACME (Glucose 1-dehydrogenase 2 OS=Bacillus megaterium GN=gdhII PE=3 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 8.084e-17
Identity = 58/210 (27.62%), Postives = 102/210 (48.57%), Query Frame = 1
Query:  130 DVSGKVVIITGASSGIGEHLAYEYXXXXXXXXXXXXXEKSLEEVADTAREI--GSPDVITIRADVSKVDDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHL--RYTKGKIVVLSSAASWLTAPRMSFYNASKAALVLFFETLRVELG-SDVGVTIVTPGFIESELTQGKFLTGEGRIQID 744
            D+  KVV++TG S G+G  +A  +              +  EE  +  +EI       I +R DV+K +D  +LVE  +  FG LD ++NNAG+ +     ++ ++ ++ Q+++ N  G+   +R A+ +      KG ++ +SS    +  P    Y ASK  + L  ETL +E     + V  + PG I++ +   KF   E R  ++
Sbjct:    4 DLKDKVVVVTGGSKGLGRAMAVRFGQEQSKVVVNYRSNE--EEALEVKKEIEEAGGQAIIVRGDVTKEEDVVNLVETAVKEFGSLDVMINNAGVENPVPSHEL-SLENWNQVIDTNLTGAFLGSREAIKYFVENDIKGNVINMSSVHEMIPWPLFVHYAASKGGMKLMTETLALEYAPKGIRVNNIGPGAIDTPINAEKFADPEQRADVE 210          
BLAST of CX047557 vs. ExPASy Swiss-Prot
Match: DHK2_STRVN (Granaticin polyketide synthase putative ketoacyl reductase 2 OS=Streptomyces violaceoruber GN=gra-orf6 PE=3 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 1.379e-16
Identity = 66/190 (34.74%), Postives = 94/190 (49.47%), Query Frame = 1
Query:  145 VVIITGASSGIGEHLAYEYXXXXXXXXXXXXXEKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNITD--FKQIMNINFWGSVYTTRFAVPHL-RYTKGKIVVLSSAASWLTAPRMSFYNASKAALVLFFETLRVELGSDVGVTIVTPGFIESELTQ 705
            V ++TG+SSGIG+ +A                 +S+E+   TA  +  PD + +RADVS+  D R LV+  + H+GRLD LVNNAG +      D+   T   +++I+ +N  G+  TT  A+PHL R   G +V +SS A    A     Y  S          L   +G  V V  V PG IE+  TQ
Sbjct:   10 VALVTGSSSGIGQTVAQRLAAEGYRVVVNSA--RSVEDGEKTAAAL--PDALYVRADVSEEADARRLVDTAVEHYGRLDVLVNNAGRTRAIPHADLAAATPEVWREILGLNVIGTWQTTVAAMPHLARSGNGSVVNVSSIAGSRPAGSSIPYAVSNGGHRAQTRLLANTVGPAVRVNAVAPGLIETPWTQ 195          
BLAST of CX047557 vs. ExPASy Swiss-Prot
Match: DHG2_BACSU (Glucose 1-dehydrogenase 2 OS=Bacillus subtilis GN=ycdF PE=1 SV=2)

HSP 1 Score: 86.6557 bits (213), Expect = 1.801e-16
Identity = 51/194 (26.29%), Postives = 101/194 (52.06%), Query Frame = 1
Query:  127 EDVSGKVVIITGASSGIGEHLAYEYXXXXXXXXXXXXXEKS-LEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHL--RYTKGKIVVLSSAASWLTAPRMSFYNASKAALVLFFETLRVELG-SDVGVTIVTPGFIESE 696
            +D++GK  I+TG+S GIG+ +A  +             + S  +E  +  ++ G    +++ ADVSK +  ++L++  + HFG LD +VNN+G + V      +++ D+++++++N  G+    + A+ H+     KG ++ +SS    +  P    Y+ SK  + +  ETL +      + V  + PG I +E
Sbjct:    3 KDLTGKTAIVTGSSKGIGKAIAERFGKEKMNVVVNYHSDPSGADETLEIIKQNGGK-AVSVEADVSKEEGIQALLDTALEHFGTLDVMVNNSGFNGVEAMPHEMSLEDWQRVIDVNVTGTFLGAKAALNHMMKNNIKGNVLNISSVHQQIPRPVNVQYSTSKGGIKMMTETLALNYADKGIRVNAIAPGTIATE 195          
BLAST of CX047557 vs. ExPASy Swiss-Prot
Match: DHI1_SAISC (Corticosteroid 11-beta-dehydrogenase isozyme 1 OS=Saimiri sciureus GN=HSD11B1 PE=2 SV=3)

HSP 1 Score: 86.2705 bits (212), Expect = 2.352e-16
Identity = 67/216 (31.02%), Postives = 108/216 (50.00%), Query Frame = 1
Query:  103 SVFNSIFSEDVSGKVVIITGASSGIGEHLAYEYXXXXXXXXXXXXXEKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNHFGRLDHLV-NNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYTKGKIVVLSSAASWLTAPRMSFYNASKAALVLFFETLRVE-LGSDVGV--TIVTPGFIESELTQGKFLTGEGRIQ 738
            S +     E + GK VI+TGAS GIG  +AY               +++L++V     E+G+     I   +  +      V +     G LD L+ N+   +S+  F D  +I   ++ M +NF   V  T  A+P L+ + G IV++SS A  +  P +S Y+ASK AL  FF ++R E L S+V V  T+   G I+++ T  K ++G  ++Q
Sbjct:   22 SAYEEFRPEMLQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAASAHYIAGTMEDMTFAEQFVAQAGKLMGGLDMLILNHITNTSLNFFHD--DIHHVRKSMEVNFLSYVVLTVAAMPMLKQSNGSIVIVSSVAGKVAYPMISAYSASKFALYGFFSSIRKEYLMSEVNVSITLCVLGLIDTD-TAMKAVSGIIKMQ 234          
BLAST of CX047557 vs. ExPASy Swiss-Prot
Match: DHI1_MESAU (Corticosteroid 11-beta-dehydrogenase isozyme 1 OS=Mesocricetus auratus GN=HSD11B1 PE=1 SV=3)

HSP 1 Score: 86.2705 bits (212), Expect = 2.352e-16
Identity = 62/194 (31.96%), Postives = 96/194 (49.48%), Query Frame = 1
Query:  127 EDVSGKVVIITGASSGIGEHLAYEYXXXXXXXXXXXXXEKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNHFGRLDHLV-NNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYTKGKIVVLSSAASWLTAPRMSFYNASKAALVLFFETLRVELG---SDVGVTIVTPGFIESE 696
            E + GK VI+TGAS GIG  +AY               E+ L++VA    E+G+     I   +  +      V +     G LD L+ N+   +S+  F D ++    ++ M +NF   V  +  A+P L+ + G IVV+SS A  +  P ++ Y+ASK AL  FF +LR E G    +V +T+   G I +E
Sbjct:   30 EMLQGKKVIVTGASKGIGREMAYHLSEMGAHVVLTARSEEGLQKVASRCLELGAASAHYIAGTMEDMTFAEQFVLKAGKLMGGLDMLILNHITYTSMNFFRDEIHA--LRKAMEVNFISYVVMSVAALPMLKQSNGSIVVVSSIAGKMAHPLVASYSASKFALDGFFSSLRREHGVTNVNVSITLCVLGLINTE 221          
BLAST of CX047557 vs. ExPASy Swiss-Prot
Match: DHGB_BACME (Glucose 1-dehydrogenase B OS=Bacillus megaterium GN=gdhB PE=1 SV=2)

HSP 1 Score: 86.2705 bits (212), Expect = 2.352e-16
Identity = 59/215 (27.44%), Postives = 111/215 (51.63%), Query Frame = 1
Query:  127 EDVSGKVVIITGASSGIGEHLAYEYXXXXXXXXXXXXXEKSLEEVADTARE-----IGSPDVITIRADVSKVDDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHL--RYTKGKIVVLSSAASW-LTAPRMSFYNASKAALVLFFETLRVELG-SDVGVTIVTPGFIESELTQGKFLTGEGRIQID 744
            +D+ GKVV+ITG+S+G+G+ +A  +              +S E+ A++  E     +G  + I ++ DV+   D  +LV+  +  FG+LD ++NNAG+ +     + ++++D+ ++++ N  G+   +R A+ +      KG ++ +SS   W +  P    Y ASK  + L  ETL +E     + V  + PG I + +   KF   E R  ++
Sbjct:    3 KDLEGKVVVITGSSTGLGKSMAIRFATEKAKVVVNY---RSKEDEANSVLEEEIKKVGG-EAIAVKGDVTVESDVINLVQSAIKEFGKLDVMINNAGMENPVSSHE-MSLSDWNKVIDTNLTGAFLGSREAIKYFVENDIKGTVINMSSVHEWKIPWPLFVHYAASKGGMKLMTETLALEYAPKGIRVNNIGPGAINTPINAEKFADPEQRADVE 212          
BLAST of CX047557 vs. ExPASy Swiss-Prot
Match: Y0419_STAS1 (Uncharacterized oxidoreductase SSP0419 OS=Staphylococcus saprophyticus subsp. saprophyticus (strain ATCC 15305 / DSM 20229) GN=SSP0419 PE=3 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 3.072e-16
Identity = 59/194 (30.41%), Postives = 104/194 (53.61%), Query Frame = 1
Query:  130 DVSGKVVIITGASSGIGEHLAYEYXXXXXXXXXXXXXEKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNHFGRLDHLVNNAGIS-SVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPH-LRYTKGKIVVLSSAASWLTAPRMSFYNASKAALVLFFETLRVELG-SDVGVTIVTPGFIESELT 702
            ++  KV ++TGASSGIG  +A                E  L EVA   ++     V T   DV+  ++   LVE+T   FG++D LVN+AG+  S A+ E   ++  ++ ++++N  G++YT    +P  L  + G I+ ++S + +    + + Y+ASKAA+    + L  EL  + V VT ++PG +++ L+
Sbjct:    3 ELQDKVAVVTGASSGIGASIAETLANQGVKVVLTGRDESRLAEVAKRIQDNKQAVVETSIVDVTHKEEVTELVEKTKEKFGQIDILVNSAGLMLSSAITEG--DVEAWEAMIDVNIKGTLYTINAVLPSMLNQSSGHIINIASISGFEVTKKSTLYSASKAAVHSITQGLEKELAKTGVRVTSISPGMVDTPLS 194          
BLAST of CX047557 vs. ExPASy Swiss-Prot
Match: DHI1_HUMAN (Corticosteroid 11-beta-dehydrogenase isozyme 1 OS=Homo sapiens GN=HSD11B1 PE=1 SV=3)

HSP 1 Score: 85.8853 bits (211), Expect = 3.072e-16
Identity = 61/194 (31.44%), Postives = 97/194 (50.00%), Query Frame = 1
Query:  127 EDVSGKVVIITGASSGIGEHLAYEYXXXXXXXXXXXXXEKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNHFGRLDHLV-NNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYTKGKIVVLSSAASWLTAPRMSFYNASKAALVLFFETLRVELG---SDVGVTIVTPGFIESE 696
            E + GK VI+TGAS GIG  +AY               +++L++V     E+G+     I   +  +      V +     G LD L+ N+   +S+ LF D  +I   ++ M +NF   V  T  A+P L+ + G IVV+SS A  +  P ++ Y+ASK AL  FF ++R E      +V +T+   G I++E
Sbjct:   30 EMLQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAASAHYIAGTMEDMTFAEQFVAQAGKLMGGLDMLILNHITNTSLNLFHD--DIHHVRKSMEVNFLSYVVLTVAALPMLKQSNGSIVVVSSLAGKVAYPMVAAYSASKFALDGFFSSIRKEYSVSRVNVSITLCVLGLIDTE 221          
BLAST of CX047557 vs. ExPASy Swiss-Prot
Match: DHI1L_BOVIN (Hydroxysteroid 11-beta-dehydrogenase 1-like protein OS=Bos taurus GN=HSD11B1L PE=2 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 4.012e-16
Identity = 59/178 (33.15%), Postives = 91/178 (51.12%), Query Frame = 1
Query:  139 GKVVIITGASSGIGEHLAYEYXXXXXXXXXXXXXEKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYTKGKIVVLSSAASWLTAPRMSFYNASKAALVLFFETLRVELG-SDVGVTI 669
            G  V++TG S+GIGE LAY Y             E  L++V    R++G+P V  I AD++  +    +V+  ++  G LD+LV N  + +      + +    + +M +NF   V  T  A+P L  +KG +VV+SS    +     S Y+A+K AL  FF +LR EL   +V V I
Sbjct:   29 GARVLLTGVSAGIGEELAYHYARLGSHLVLTAHTEALLQQVVGNCRKLGAPKVFYIAADMASPEVPERVVQFALDKLGGLDYLVLN-HLGAAPAGTRVRSSQSTRWLMQMNFLSYVQLTSSALPSLTDSKGSLVVVSSLLGRVPTSFSSPYSAAKFALDSFFSSLRRELDVQEVNVAI 205          
The following BLAST results are available for this feature:
BLAST of CX047557 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 180
Match NameE-valueIdentityDescription
DHI1L_MACFA8.084e-1734.44Hydroxysteroid 11-beta-dehydrogenase 1-like protei... [more]
DHG2_BACME8.084e-1727.62Glucose 1-dehydrogenase 2 OS=Bacillus megaterium G... [more]
DHK2_STRVN1.379e-1634.74Granaticin polyketide synthase putative ketoacyl r... [more]
DHG2_BACSU1.801e-1626.29Glucose 1-dehydrogenase 2 OS=Bacillus subtilis GN=... [more]
DHI1_SAISC2.352e-1631.02Corticosteroid 11-beta-dehydrogenase isozyme 1 OS=... [more]
DHI1_MESAU2.352e-1631.96Corticosteroid 11-beta-dehydrogenase isozyme 1 OS=... [more]
DHGB_BACME2.352e-1627.44Glucose 1-dehydrogenase B OS=Bacillus megaterium G... [more]
Y0419_STAS13.072e-1630.41Uncharacterized oxidoreductase SSP0419 OS=Staphylo... [more]
DHI1_HUMAN3.072e-1631.44Corticosteroid 11-beta-dehydrogenase isozyme 1 OS=... [more]
DHI1L_BOVIN4.012e-1633.15Hydroxysteroid 11-beta-dehydrogenase 1-like protei... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS09_14H02_g Ruby Orange Developing Seed cDNA Library UCRCS09 Citrus sinensis cDNA clone UCRCS09-14H02-P3-1-4.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX047557 ID=CX047557; Name=CX047557; organism=Citrus sinensis; type=EST; length=832bp
ATGGATTTGATTAACAAGTTCCTTAATCTTGTGGCACCCCCCTTCACCTT
ATTCTCCCTGTGCCTCTTCTTACCACCATTTCTATGTTACAAGTTCTTAC
TCTCCGTCTTTAACTCCATATTCAGTGAAGATGTTTCCGGAAAGGTCGTC
ATCATCACCGGTGCTTCCTCCGGCATCGGAGAGCACTTGGCGTATGAGTA
TGCTAGAAGAGGAGCCTGCCTAGCTCTATGCGCCCGCAGGGAAAAGAGTC
TTGAAGAAGTTGCCGATACAGCGCGTGAAATCGGCTCTCCTGATGTTATC
ACGATTCGTGCTGACGTTTCAAAAGTTGATGACTGTAGGAGCCTTGTTGA
AGAAACTATGAATCACTTTGGCAGATTGGATCATCTTGTGAATAATGCTG
GGATTTCTTCAGTTGCCCTGTTCGAAGATATTGTTAATATCACCGATTTT
AAGCAAATAATGAACATAAATTTCTGGGGATCAGTTTATACCACTCGATT
TGCGGTTCCACATCTTAGATATACCAAAGGCAAGATCGTGGTTTTATCAT
CCGCTGCTTCATGGCTAACTGCACCAAGAATGAGCTTTTACAATGCAAGC
AAAGCGGCGTTGGTACTCTTTTTCGAAACATTAAGGGTCGAACTTGGTTC
CGACGTTGGTGTAACAATTGTTACGCCTGGGTTCATAGAGTCGGAATTAA
CCCAAGGAAAATTCTTAACGGGAGAAGGCAGAATTCAGATAGATGAAAAC
TTAAGAGATGCTCAAGTGAGCACTATCCCAGTTCAATCAGCGTGGTCATG
TGCAAAGGCGATAGTGAACAGTGTATGCCGCG
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