CX047557

Overview
NameCX047557
Unique NameCX047557
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length832
Libraries
Library NameType
Ruby Orange Developing Seed cDNA Library UCRCS09cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX047557 vs. ExPASy Swiss-Prot
Match: FABG_STAAR (3-oxoacyl-[acyl-carrier-protein] reductase OS=Staphylococcus aureus (strain MRSA252) GN=fabG PE=3 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 6.406e-14
Identity = 59/216 (27.31%), Postives = 101/216 (46.76%), Query Frame = 1
Query:  142 KVVIITGASSGIGEHLAYEYXXXXXXXXXXXXXEKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPH-LRYTKGKIVVLSSAASWLTAPRMSFYNASKAALVLFFETLRVELGS-DVGVTIVTPGFIESELTQGKFLTGEGRIQIDENLRDAQVSTIPV 783
            K  ++TGAS GIG  +A +               K   E      +    D   I+A+V+  D+ +++++E ++ FG LD LVNNAGI+   L   +    ++  +++ N  G     + A P  LR   G I+ LSS    +  P  + Y A+KA ++   ++   EL S  + V  V PGFI S++T            + + L++  ++ IP+
Sbjct:    5 KSALVTGASRGIGRSIALQLAEEGYNVAVNYAGSKEKAEAVVEEIKAKGVDSFAIQANVADADEVKAMIKEVVSQFGSLDVLVNNAGITRDNLLMRMKE-QEWDDVIDTNLKGVFNCIQKATPQMLRQRSGAIINLSSVVGAVGNPGQANYVATKAGVIGLTKSAARELASRGITVNAVAPGFIVSDMTDA----------LSDELKEQMLTQIPL 209          
BLAST of CX047557 vs. ExPASy Swiss-Prot
Match: FABG_STAAN (3-oxoacyl-[acyl-carrier-protein] reductase OS=Staphylococcus aureus (strain N315) GN=fabG PE=1 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 6.406e-14
Identity = 59/216 (27.31%), Postives = 101/216 (46.76%), Query Frame = 1
Query:  142 KVVIITGASSGIGEHLAYEYXXXXXXXXXXXXXEKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPH-LRYTKGKIVVLSSAASWLTAPRMSFYNASKAALVLFFETLRVELGS-DVGVTIVTPGFIESELTQGKFLTGEGRIQIDENLRDAQVSTIPV 783
            K  ++TGAS GIG  +A +               K   E      +    D   I+A+V+  D+ +++++E ++ FG LD LVNNAGI+   L   +    ++  +++ N  G     + A P  LR   G I+ LSS    +  P  + Y A+KA ++   ++   EL S  + V  V PGFI S++T            + + L++  ++ IP+
Sbjct:    5 KSALVTGASRGIGRSIALQLAEEGYNVAVNYAGSKEKAEAVVEEIKAKGVDSFAIQANVADADEVKAMIKEVVSQFGSLDVLVNNAGITRDNLLMRMKE-QEWDDVIDTNLKGVFNCIQKATPQMLRQRSGAIINLSSVVGAVGNPGQANYVATKAGVIGLTKSAARELASRGITVNAVAPGFIVSDMTDA----------LSDELKEQMLTQIPL 209          
BLAST of CX047557 vs. ExPASy Swiss-Prot
Match: FABG_STAAM (3-oxoacyl-[acyl-carrier-protein] reductase OS=Staphylococcus aureus (strain Mu50 / ATCC 700699) GN=fabG PE=1 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 6.406e-14
Identity = 59/216 (27.31%), Postives = 101/216 (46.76%), Query Frame = 1
Query:  142 KVVIITGASSGIGEHLAYEYXXXXXXXXXXXXXEKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPH-LRYTKGKIVVLSSAASWLTAPRMSFYNASKAALVLFFETLRVELGS-DVGVTIVTPGFIESELTQGKFLTGEGRIQIDENLRDAQVSTIPV 783
            K  ++TGAS GIG  +A +               K   E      +    D   I+A+V+  D+ +++++E ++ FG LD LVNNAGI+   L   +    ++  +++ N  G     + A P  LR   G I+ LSS    +  P  + Y A+KA ++   ++   EL S  + V  V PGFI S++T            + + L++  ++ IP+
Sbjct:    5 KSALVTGASRGIGRSIALQLAEEGYNVAVNYAGSKEKAEAVVEEIKAKGVDSFAIQANVADADEVKAMIKEVVSQFGSLDVLVNNAGITRDNLLMRMKE-QEWDDVIDTNLKGVFNCIQKATPQMLRQRSGAIINLSSVVGAVGNPGQANYVATKAGVIGLTKSAARELASRGITVNAVAPGFIVSDMTDA----------LSDELKEQMLTQIPL 209          
BLAST of CX047557 vs. ExPASy Swiss-Prot
Match: FABG_STAAC (3-oxoacyl-[acyl-carrier-protein] reductase OS=Staphylococcus aureus (strain COL) GN=fabG PE=3 SV=2)

HSP 1 Score: 78.1814 bits (191), Expect = 6.406e-14
Identity = 59/216 (27.31%), Postives = 101/216 (46.76%), Query Frame = 1
Query:  142 KVVIITGASSGIGEHLAYEYXXXXXXXXXXXXXEKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPH-LRYTKGKIVVLSSAASWLTAPRMSFYNASKAALVLFFETLRVELGS-DVGVTIVTPGFIESELTQGKFLTGEGRIQIDENLRDAQVSTIPV 783
            K  ++TGAS GIG  +A +               K   E      +    D   I+A+V+  D+ +++++E ++ FG LD LVNNAGI+   L   +    ++  +++ N  G     + A P  LR   G I+ LSS    +  P  + Y A+KA ++   ++   EL S  + V  V PGFI S++T            + + L++  ++ IP+
Sbjct:    5 KSALVTGASRGIGRSIALQLAEEGYNVAVNYAGSKEKAEAVVEEIKAKGVDSFAIQANVADADEVKAMIKEVVSQFGSLDVLVNNAGITRDNLLMRMKE-QEWDDVIDTNLKGVFNCIQKATPQMLRQRSGAIINLSSVVGAVGNPGQANYVATKAGVIGLTKSAARELASRGITVNAVAPGFIVSDMTDA----------LSDELKEQMLTQIPL 209          
BLAST of CX047557 vs. ExPASy Swiss-Prot
Match: FABG_CHLMU (3-oxoacyl-[acyl-carrier-protein] reductase OS=Chlamydia muridarum GN=fabG PE=3 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 6.406e-14
Identity = 59/217 (27.19%), Postives = 108/217 (49.77%), Query Frame = 1
Query:  142 KVVIITGASSGIGEHLAYEYXXXXXXXXXXXXXEKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAV--PHLRYTKGKIVVLSSAASWLTAPRMSFYNASKAALVLFFETLRVELGS-DVGVTIVTPGFIESELTQGKFLTGEGRIQIDENLRDAQVSTIPV 783
            K  I+TG S GIG  +A  +             E++ +  A    +     V     DVSK D   + V++ +  +G +D +VNNAGI+  +L    ++  ++  +++ N  GS+Y    AV  P ++   G IV +SS      +P  + Y A+KA ++ F + L  E+GS ++ V  + PGFI++++T+G          + +NL++  +  +P+
Sbjct:    8 KAAIVTGGSRGIGFGIAKLFAEHGANVQIWGINEEAGKSAAQDLSDKTGSKVSFALVDVSKNDMVSAQVQKFLAEYGTIDVVVNNAGITRDSLLMR-MSEEEWSSVIDTNL-GSIYNVCSAVIRPMIKARSGAIVNISSIVGLRGSPGQTNYAAAKAGIIGFSKALSKEVGSKNIRVNCIAPGFIDTDMTKG----------LSDNLKNEWLKGVPL 212          
BLAST of CX047557 vs. ExPASy Swiss-Prot
Match: FABG_CHLTR (3-oxoacyl-[acyl-carrier-protein] reductase OS=Chlamydia trachomatis GN=fabG PE=1 SV=3)

HSP 1 Score: 77.7962 bits (190), Expect = 8.366e-14
Identity = 59/217 (27.19%), Postives = 106/217 (48.85%), Query Frame = 1
Query:  142 KVVIITGASSGIGEHLAYEYXXXXXXXXXXXXXEKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAV--PHLRYTKGKIVVLSSAASWLTAPRMSFYNASKAALVLFFETLRVELGS-DVGVTIVTPGFIESELTQGKFLTGEGRIQIDENLRDAQVSTIPV 783
            K  I+TG S GIG  +A  +              ++ +  A T  E     V     DVSK D   + V+  +  +  +D +VNNAGI+  AL    ++  ++  ++N N  GS+Y    AV  P ++   G I+ +SS      +P  + Y A+KA ++ F + L  E+GS ++ V  + PGFI++++T+           +++NL++  +  +P+
Sbjct:    8 KTAIVTGGSRGIGFSIAKLFAEQGANVQIWGINGEAGQAAAQTLSEQTGRQVSFALVDVSKNDMVSAQVQNFLAEYNTIDVIVNNAGITRDALLMR-MSEEEWSSVINTNL-GSIYNVCSAVIRPMIKARSGAIINISSIVGLRGSPGQTNYAAAKAGIIGFSKALSKEVGSKNIRVNCIAPGFIDTDMTK----------SLNDNLKNEWLKGVPL 212          
BLAST of CX047557 vs. ExPASy Swiss-Prot
Match: DHI1_RABIT (Corticosteroid 11-beta-dehydrogenase isozyme 1 OS=Oryctolagus cuniculus GN=HSD11B1 PE=1 SV=2)

HSP 1 Score: 77.7962 bits (190), Expect = 8.366e-14
Identity = 57/193 (29.53%), Postives = 95/193 (49.22%), Query Frame = 1
Query:  127 EDVSGKVVIITGASSGIGEHLAYEYXXXXXXXXXXXXXEKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYTKGKIVVLSSAASWLTAPRMSFYNASKAALVLFFETLRVE---LGSDVGVTIVTPGFIESE 696
            E + GK VI+TGAS GIG+ +A+               +++L+EV     ++G+     I   +  +      V +     G LD L+ N  I++ +L     +I   ++ M +NF   V  T  A+P L+ + G IVV+SS A  +  P ++ Y+ASK AL  FF  +R E      +V +T+   G I+++
Sbjct:   30 EMLQGKKVIVTGASKGIGKEIAFHLAKMGAHVVVTARSKETLQEVVAHCLKLGAASAHYIAGTMEDMTFAEQFVAKAGKLMGGLDMLILNH-ITNASLMFFNNDIHHVRKEMEVNFLSYVVLTVAALPMLKQSNGSIVVVSSLAGKIAHPLIAPYSASKFALDGFFSAIRKEHALTNVNVSITLCVLGLIDTD 221          
BLAST of CX047557 vs. ExPASy Swiss-Prot
Match: DHB2_MOUSE (Estradiol 17-beta-dehydrogenase 2 OS=Mus musculus GN=Hsd17b2 PE=2 SV=2)

HSP 1 Score: 77.7962 bits (190), Expect = 8.366e-14
Identity = 58/194 (29.90%), Postives = 99/194 (51.03%), Query Frame = 1
Query:  133 VSGKVVIITGASSGIGEHLAYEYXXXXXXXXXXXXXEKSLEEVADTAREIGSPDVITIRADVSK---VDDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYTKGKIVVLSSAASWLTAPRMSFYNASKAALVLFFETLRVELGS-DVGVTIVTPGFIESELT 702
            V  K V++TGA SG G  LA                ++     A+  R+  S  +  ++ DV+K   + D  S V E +   G L  +VNNAG+  + +  +++ ++ +++ M +NF+G+V  T+  +P LR +KG++V +SS    +     S Y A+KAAL +F   +R EL    V V  + PG  ++ +T
Sbjct:   81 VDQKAVLVTGADSGFGHGLAKHLDKLGFTVFAGVLDKEG--PGAEELRKHCSERLSVLQMDVTKPEQIKDAHSKVTEKIQDKG-LWAVVNNAGVFHLPIDGELIPMSIYRKCMAVNFFGTVEVTKAFLPLLRKSKGRLVNVSSMGGTVPLQMTSAYAATKAALTMFSTIIRQELDKWGVKVVTIKPGGFKTNIT 271          
BLAST of CX047557 vs. ExPASy Swiss-Prot
Match: Y2567_STAAR (Uncharacterized oxidoreductase SAR2567 OS=Staphylococcus aureus (strain MRSA252) GN=SAR2567 PE=3 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 1.093e-13
Identity = 49/192 (25.52%), Postives = 100/192 (52.08%), Query Frame = 1
Query:  133 VSGKVVIITGASSGIGEHLAYEYXXXXXXXXXXXXXEKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVP-HLRYTKGKIVVLSSAASWLTAPRMSFYNASKAALVLFFETLRVELG-SDVGVTIVTPGFIESELT 702
            ++ K+ ++TGA SGIGE +A                +  L+ VA+   ++    V  +  DV+K ++   L++     FG LD ++N+AG    +   D   + ++  ++++N  G++YT + A+P  L  + G ++ ++S + +      + Y+A+KAA+    + L  EL  + V VT ++PG +++ +T
Sbjct:    4 LTDKIAVVTGAGSGIGEAIATLLHEEGAKVVLAGRNKDKLQNVAN---QLAQDSVKVVPTDVTKKEEVDELIKMAQQTFGGLDIVINSAGQMLSSKITD-YQVDEWDSMIDVNIKGTLYTAKAALPTMLEQSSGHLINIASISGFEVTKSSTIYSATKAAVHTITQGLEKELAKTGVKVTSISPGMVDTAIT 191          
BLAST of CX047557 vs. ExPASy Swiss-Prot
Match: THR1_GLOLA (Trihydroxynaphthalene reductase OS=Glomerella lagenarium GN=THR1 PE=3 SV=3)

HSP 1 Score: 77.411 bits (189), Expect = 1.093e-13
Identity = 55/195 (28.21%), Postives = 94/195 (48.21%), Query Frame = 1
Query:  124 SEDVSGKVVIITGASSGIGEHLAYEYXXXXXXXXXXXXXE-KSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYTKGKIVVLSSAASWLT-APRMSFYNASKAALVLFFETLRVELG-SDVGVTIVTPGFIESEL 699
            S  + GKV ++TGA  GIG  +A E                ++ EEV    ++ GS D  +I+A+VS VD    +  E    +GRLD + +N+G+ S    +D V   +F ++  IN  G  +  R A  HL    G+++++ S        P+ + Y+ SK  +  F   + ++ G   + V  V PG I++++
Sbjct:   24 SASLMGKVALVTGAGRGIGREMAMELGRRGAKVIVNYANSAETAEEVVQAIKKSGS-DAASIKANVSDVDQIVKMFGEAKQIWGRLDIVCSNSGVVSFGHVKD-VTPEEFDRVFAINTRGQFFVAREAYKHLE-VGGRLILMGSITGQAKGVPKHAVYSGSKGTIETFVRCMAIDFGDKKITVNAVAPGGIKTDM 215          
The following BLAST results are available for this feature:
BLAST of CX047557 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 180
Match NameE-valueIdentityDescription
FABG_STAAR6.406e-1427.313-oxoacyl-[acyl-carrier-protein] reductase OS=Stap... [more]
FABG_STAAN6.406e-1427.313-oxoacyl-[acyl-carrier-protein] reductase OS=Stap... [more]
FABG_STAAM6.406e-1427.313-oxoacyl-[acyl-carrier-protein] reductase OS=Stap... [more]
FABG_STAAC6.406e-1427.313-oxoacyl-[acyl-carrier-protein] reductase OS=Stap... [more]
FABG_CHLMU6.406e-1427.193-oxoacyl-[acyl-carrier-protein] reductase OS=Chla... [more]
FABG_CHLTR8.366e-1427.193-oxoacyl-[acyl-carrier-protein] reductase OS=Chla... [more]
DHI1_RABIT8.366e-1429.53Corticosteroid 11-beta-dehydrogenase isozyme 1 OS=... [more]
DHB2_MOUSE8.366e-1429.90Estradiol 17-beta-dehydrogenase 2 OS=Mus musculus ... [more]
Y2567_STAAR1.093e-1325.52Uncharacterized oxidoreductase SAR2567 OS=Staphylo... [more]
THR1_GLOLA1.093e-1328.21Trihydroxynaphthalene reductase OS=Glomerella lage... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS09_14H02_g Ruby Orange Developing Seed cDNA Library UCRCS09 Citrus sinensis cDNA clone UCRCS09-14H02-P3-1-4.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX047557 ID=CX047557; Name=CX047557; organism=Citrus sinensis; type=EST; length=832bp
ATGGATTTGATTAACAAGTTCCTTAATCTTGTGGCACCCCCCTTCACCTT
ATTCTCCCTGTGCCTCTTCTTACCACCATTTCTATGTTACAAGTTCTTAC
TCTCCGTCTTTAACTCCATATTCAGTGAAGATGTTTCCGGAAAGGTCGTC
ATCATCACCGGTGCTTCCTCCGGCATCGGAGAGCACTTGGCGTATGAGTA
TGCTAGAAGAGGAGCCTGCCTAGCTCTATGCGCCCGCAGGGAAAAGAGTC
TTGAAGAAGTTGCCGATACAGCGCGTGAAATCGGCTCTCCTGATGTTATC
ACGATTCGTGCTGACGTTTCAAAAGTTGATGACTGTAGGAGCCTTGTTGA
AGAAACTATGAATCACTTTGGCAGATTGGATCATCTTGTGAATAATGCTG
GGATTTCTTCAGTTGCCCTGTTCGAAGATATTGTTAATATCACCGATTTT
AAGCAAATAATGAACATAAATTTCTGGGGATCAGTTTATACCACTCGATT
TGCGGTTCCACATCTTAGATATACCAAAGGCAAGATCGTGGTTTTATCAT
CCGCTGCTTCATGGCTAACTGCACCAAGAATGAGCTTTTACAATGCAAGC
AAAGCGGCGTTGGTACTCTTTTTCGAAACATTAAGGGTCGAACTTGGTTC
CGACGTTGGTGTAACAATTGTTACGCCTGGGTTCATAGAGTCGGAATTAA
CCCAAGGAAAATTCTTAACGGGAGAAGGCAGAATTCAGATAGATGAAAAC
TTAAGAGATGCTCAAGTGAGCACTATCCCAGTTCAATCAGCGTGGTCATG
TGCAAAGGCGATAGTGAACAGTGTATGCCGCG
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