CX047557

Overview
NameCX047557
Unique NameCX047557
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length832
Libraries
Library NameType
Ruby Orange Developing Seed cDNA Library UCRCS09cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX047557 vs. ExPASy Swiss-Prot
Match: Y2422_STAA3 (Uncharacterized oxidoreductase SAUSA300_2422 OS=Staphylococcus aureus (strain USA300) GN=SAUSA300_2422 PE=3 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 3.179e-13
Identity = 49/192 (25.52%), Postives = 100/192 (52.08%), Query Frame = 1
Query:  133 VSGKVVIITGASSGIGEHLAYEYXXXXXXXXXXXXXEKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVP-HLRYTKGKIVVLSSAASWLTAPRMSFYNASKAALVLFFETLRVELG-SDVGVTIVTPGFIESELT 702
            ++ KV ++TGA SGIGE +A                ++ L+ VA+   ++    V  +  DV+  ++   L++     FG LD ++N+AG    +   D   + ++  ++++N  G++YT + A+P  L  + G ++ ++S + +      + Y+A+KAA+    + L  EL  + V VT ++PG +++ +T
Sbjct:    4 LTDKVAVVTGAGSGIGEAIATLLHEEGAKVVLAGRNKEKLQNVAN---QLSQDSVKVVPTDVTNKEEVDELIKIAQQTFGGLDIVINSAGQMLSSKITD-YQVDEWDSMIDVNIKGTLYTAQAALPTMLEQSSGHLINIASISGFEVTKSSTIYSATKAAVHTITQGLEKELAKTGVKVTSISPGMVDTAIT 191          
BLAST of CX047557 vs. ExPASy Swiss-Prot
Match: KDSR_BOVIN (3-ketodihydrosphingosine reductase OS=Bos taurus GN=KDSR PE=2 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 3.179e-13
Identity = 61/201 (30.35%), Postives = 102/201 (50.75%), Query Frame = 1
Query:  139 GKVVIITGASSGIGEHLAYEYXXXXXXXXXXXXXEKSLEEVADTAREIGSPD---VITIRADVSK-VDDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYTK-GKIVVLSSAASWLTAPRMSFYNASKAALVLFFETLRVELGS-DVGVTIV------TPGFIESELTQ 705
            G  V++TG SSGIG+ +A E              E  L +      +    D   V+ I  DVS+      +++++     G +D LVN AG+S    FED+  ++ F+++M+IN+ GSVY +R  +  ++  + G++V +SS A  L     + Y++SK AL    E L++E+   +V VT+       TPGF +   T+
Sbjct:   32 GAHVVVTGGSSGIGKCIAIECYKQGAFITLVARNEDKLLQAKKEIEKHSINDKQVVLCISVDVSQDYSQVENVIKQAQEKLGPVDMLVNCAGMSLSGKFEDL-EVSTFERLMSINYLGSVYPSRAVIATMKERRMGRVVFVSSQAGQLGLFGYTAYSSSKFALRGLAEALQMEVKPYNVYVTVAYPPDTDTPGFAKENQTK 231          
BLAST of CX047557 vs. ExPASy Swiss-Prot
Match: BACC2_BACSU (Bacilysin biosynthesis oxidoreductase bacC OS=Bacillus subtilis GN=bacC PE=3 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 3.179e-13
Identity = 52/206 (25.24%), Postives = 101/206 (49.03%), Query Frame = 1
Query:  130 DVSGKVVIITGASSGIGEHLAYEYXXXXXXXXXXXXXEKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPH-LRYTKGKIVVLSSAASWLTAPRMSFYNASKAALVLFFETLRVELGS-DVGVTIVTPGFIESELTQGKFL-TGEGRIQ 738
            +++ K V+ITG +SGIG      +             E   E +    R+  +  +  +  D++    C++ +   ++ FG LD L+NNAGI  VA   + + ++++ +++N+N  G    ++ A+ + L+  KG I+   S    +  P +  YNASK  ++    ++ V+    ++ V  V PG I++ L +  FL   EG ++
Sbjct:    2 NLTDKTVLITGGASGIGYAAVQAFLNQQANVVVADIDEAQGEAMI---RKENNDRLHFVHTDITDEPACQNAIRSAVDKFGGLDVLINNAGIEIVAPIHE-MELSNWNKVLNVNLTGMFLMSKHALKYMLKSGKGNIINTCSVGGVVAWPDIPAYNASKGGVLQLTRSMAVDYAKHNIRVNCVCPGIIDTPLNEKSFLENNEGTLE 203          
BLAST of CX047557 vs. ExPASy Swiss-Prot
Match: Y2403_STAAW (Uncharacterized oxidoreductase MW2403 OS=Staphylococcus aureus (strain MW2) GN=MW2403 PE=3 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 4.152e-13
Identity = 48/192 (25.00%), Postives = 100/192 (52.08%), Query Frame = 1
Query:  133 VSGKVVIITGASSGIGEHLAYEYXXXXXXXXXXXXXEKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVP-HLRYTKGKIVVLSSAASWLTAPRMSFYNASKAALVLFFETLRVELG-SDVGVTIVTPGFIESELT 702
            ++ K+ ++TGA SGIGE +A                ++ L+ VA+   ++    V  +  DV+  ++   L++     FG LD ++N+AG    +   D   + ++  ++++N  G++YT + A+P  L  + G ++ ++S + +      + Y+A+KAA+    + L  EL  + V VT ++PG +++ +T
Sbjct:    4 LTDKIAVVTGAGSGIGEAIATLLHEEGAKVVLAGRNKEKLQNVAN---QLSQDSVKVVPTDVTNKEEVDELIKIAQQTFGGLDIVINSAGQMLSSKITD-YQVDEWDSMIDVNIKGTLYTVQAALPTMLEQSSGHLINIASISGFEVTKSSTIYSATKAAVHTITQGLEKELAKTGVKVTSISPGMVDTAIT 191          
BLAST of CX047557 vs. ExPASy Swiss-Prot
Match: Y2370_STAAS (Uncharacterized oxidoreductase SAS2370 OS=Staphylococcus aureus (strain MSSA476) GN=SAS2370 PE=3 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 4.152e-13
Identity = 48/192 (25.00%), Postives = 100/192 (52.08%), Query Frame = 1
Query:  133 VSGKVVIITGASSGIGEHLAYEYXXXXXXXXXXXXXEKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVP-HLRYTKGKIVVLSSAASWLTAPRMSFYNASKAALVLFFETLRVELG-SDVGVTIVTPGFIESELT 702
            ++ K+ ++TGA SGIGE +A                ++ L+ VA+   ++    V  +  DV+  ++   L++     FG LD ++N+AG    +   D   + ++  ++++N  G++YT + A+P  L  + G ++ ++S + +      + Y+A+KAA+    + L  EL  + V VT ++PG +++ +T
Sbjct:    4 LTDKIAVVTGAGSGIGEAIATLLHEEGAKVVLAGRNKEKLQNVAN---QLSQDSVKVVPTDVTNKEEVDELIKIAQQTFGGLDIVINSAGQMLSSKITD-YQVDEWDSMIDVNIKGTLYTVQAALPTMLEQSSGHLINIASISGFEVTKSSTIYSATKAAVHTITQGLEKELAKTGVKVTSISPGMVDTAIT 191          
BLAST of CX047557 vs. ExPASy Swiss-Prot
Match: BPHB_PSEPU (Cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase OS=Pseudomonas putida GN=bphB PE=3 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 5.423e-13
Identity = 62/221 (28.05%), Postives = 101/221 (45.70%), Query Frame = 1
Query:  133 VSGKVVIITGASSGIGEHLAYEYXXXXXXXXXXXXXEKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNHFGRLDHLVNNAGI--SSVALFEDIVNITD--FKQIMNINFWGSVYTTRFAVPHLRYTKGKIVVLSSAASWLTAPRMSFYNASKAALVLFFETLRVELGSDVGVTIVTPGFIESELTQGKFLTGEGRIQIDENLRDAQVSTIPV 783
            ++G+VV+ITG +SG+G  L   +             +KS E +A    + G  +V+ +  DV  ++D +      +  FG++D L+ NAGI   S AL +      D  F ++ +IN  G ++  +  +P L  ++G ++   S A +        Y A+K A+V     L  EL   V V  V PG I S+L     L   G+      L D   S +P+
Sbjct:    3 LTGEVVLITGGASGLGRALVDRFVAERAKVAVL---DKSAERLAQLETDHGD-NVLGVTGDVRSLEDQKQAASRCVAKFGKIDTLIPNAGIWDYSTALIDLPEESLDAAFDEVFHINVKGYIHAVKACLPALVASRGNVIFTISNAGFYPNGGGPLYTAAKHAVVGLVRELAFELAPYVRVNGVGPGGINSDLRGPSSLGMGGKAISTVPLADMLKSVLPI 219          
BLAST of CX047557 vs. ExPASy Swiss-Prot
Match: YKVO_BACSU (Uncharacterized oxidoreductase ykvO OS=Bacillus subtilis GN=ykvO PE=3 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 7.082e-13
Identity = 58/208 (27.88%), Postives = 100/208 (48.08%), Query Frame = 1
Query:  139 GKVVIITGASSGIGEHLAYEYXXXXXXXXXXXXXEKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVPHLRYTKGKIVVLSSAASWLTAPRMSFYNASKAALVLFFETLRVEL-GSDVGVTIVTPGFIESELTQGKFLTGEGRIQIDENLRD 759
            GK+ ++TG +SGIG   A ++             +  L++  +   +IG  +V  ++ D+SK++D   L +      G+LD L  NAGI +     +I       +  +IN  G+++T + A+       G I+V  S A  +  P  S Y ASKAAL        ++L G+++ V +V+PG I +      F  G+   ++ EN R+
Sbjct:    6 GKIALVTGGTSGIGLATAQKFVNEGAYVYITGRRQNELDKAVN---QIGK-NVTGVQGDISKLEDLDKLYDIIKQEKGKLDILFANAGIGNFLPLGEITE-EQVDRTFDINVKGTIFTVQKALSLFPDKVGSIIVTGSTAGSIGNPAFSVYGASKAALRALVRNWILDLKGTEIRVNVVSPGGILTPAYDELF--GDALEEVLENSRN 206          
BLAST of CX047557 vs. ExPASy Swiss-Prot
Match: Y452_LISIN (Uncharacterized oxidoreductase Lin0452 OS=Listeria innocua GN=lin0452 PE=3 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 7.082e-13
Identity = 60/199 (30.15%), Postives = 96/199 (48.24%), Query Frame = 1
Query:  133 VSGKVVIITGASSGIGEHLAYEYXXXXXXXXXXXXXEKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNHFGRLDHLVNNAGISS----VALFEDIVNITDFKQIMNINFWGSVYTTRFAVP-HLRYTKGKIVVLSSAASWLTAPRMSFYNASKAALVLFFETLRVEL---GSDVGVTIVTPGFIESELTQ 705
            +  KV+IITGASSGIGE  A                 + LE++  T +   S + I  + DV+K +D + LVE  +  +G++D +  NAGI       AL ED     +++Q+++IN  G +      +P  +    G I+  SS A     P  + Y A+K A+    E LR+E    G+++    + P  I +EL +
Sbjct:    3 IKNKVIIITGASSGIGEATAILLAEKGAKLVLAARRVEKLEKIVQTIKA-SSGEAIFAKTDVTKREDNKKLVELAIERYGKVDAIFLNAGIMPNSPLSALKED-----EWEQMIDINIKGVLNGIAAVLPSFIAQKSGHIIATSSVAGLKAYPGGAVYGATKWAVRDLMEVLRMESAQEGTNIRTATIYPAAINTELLE 195          
BLAST of CX047557 vs. ExPASy Swiss-Prot
Match: HCAB_PHOLL (3-phenylpropionate-dihydrodiol/cinnamic acid-dihydrodiol dehydrogenase OS=Photorhabdus luminescens subsp. laumondii GN=hcaB PE=3 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 7.082e-13
Identity = 60/222 (27.03%), Postives = 98/222 (44.14%), Query Frame = 1
Query:  133 VSGKVVIITGASSGIGEHLAYEYXXXXXXXXXXXXXEKSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNHFGRLDHLVNNAGI--SSVALFEDIVNITD--FKQIMNINFWGSVYTTRFAVPHLRYTKGKIVVLSSAASWLTAPRMSFYNASKAALVLFFETLRVELGSDVGVTIVTPGFIESELTQGKFLTGEGRIQIDENLRDAQVSTIPVQ 786
            +  +V+++TG  SG+G  L   +             E S E+    A   G+ D+  I  DV   +D    V ET+  FG+LD  V NAGI    ++L +      D  F ++M +N  G +   + A+P L  ++G ++   S +SW +      Y ASK   V     L  EL   + V  V P  + S+L     L+ + R   D    ++  + +P+Q
Sbjct:    4 IKDQVILLTGGGSGLGLALIERFIAEGAKVGVL---ELSAEKATALAHCFGN-DICVIHGDVVSFEDNERAVAETVRCFGKLDCFVGNAGIWDHKISLLDASPEQIDKGFDELMGVNLKGYILGAKAALPALTASEGSMIFTLSNSSWFSGGGGVLYTASKHGAVGMIRQLAYELAPVIRVNGVAPCGMPSDLRGAASLSQQDRCITDNLSLESLSAILPLQ 221          
BLAST of CX047557 vs. ExPASy Swiss-Prot
Match: FABG3_BRANA (3-oxoacyl-[acyl-carrier-protein] reductase 3, chloroplastic OS=Brassica napus GN=bkr3 PE=2 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 7.082e-13
Identity = 60/220 (27.27%), Postives = 107/220 (48.64%), Query Frame = 1
Query:  133 VSGKVVIITGASSGIGEHLAYEYXXXXXXXXXXXXXE-KSLEEVADTAREIGSPDVITIRADVSKVDDCRSLVEETMNHFGRLDHLVNNAGISSVALFEDIVNITDFKQIMNINFWGSVYTTRFAVP-HLRYTKGKIVVLSSAASWLTAPRMSFYNASKAALVLFFETLRVELGS-DVGVTIVTPGFIESELTQGKFLTGEGRIQIDENLRDAQVSTIPV 783
            V   VV++TGAS GIG+ +A                  K  EEV+      G    IT   DVSK  D  ++++  ++ +G +D +VNNAGI+   L   +   + + +++++N  G    T+ A    ++  KG+I+ ++S    +     + Y A+KA ++ F +T   E  S ++ V +V PGFI S++T           ++ E++    + TIP+
Sbjct:   70 VESPVVVVTGASRGIGKAIALSLGKAGCKVLVNYARSAKEAEEVSKQIEAYGG-QAITFGGDVSKEADVEAMMKTAIDAWGTIDVVVNNAGITRDTLLIRMKK-SQWDEVIDLNLTGVFLCTQAATKIMMKKRKGRIINIASVVGLIGNIGQANYAAAKAGVIGFSKTAAREGASRNINVNVVCPGFIASDMT----------AKLGEDMEKKILGTIPL 277          
The following BLAST results are available for this feature:
BLAST of CX047557 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 180
Match NameE-valueIdentityDescription
Y2422_STAA33.179e-1325.52Uncharacterized oxidoreductase SAUSA300_2422 OS=St... [more]
KDSR_BOVIN3.179e-1330.353-ketodihydrosphingosine reductase OS=Bos taurus G... [more]
BACC2_BACSU3.179e-1325.24Bacilysin biosynthesis oxidoreductase bacC OS=Baci... [more]
Y2403_STAAW4.152e-1325.00Uncharacterized oxidoreductase MW2403 OS=Staphyloc... [more]
Y2370_STAAS4.152e-1325.00Uncharacterized oxidoreductase SAS2370 OS=Staphylo... [more]
BPHB_PSEPU5.423e-1328.05Cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase OS=... [more]
YKVO_BACSU7.082e-1327.88Uncharacterized oxidoreductase ykvO OS=Bacillus su... [more]
Y452_LISIN7.082e-1330.15Uncharacterized oxidoreductase Lin0452 OS=Listeria... [more]
HCAB_PHOLL7.082e-1327.033-phenylpropionate-dihydrodiol/cinnamic acid-dihyd... [more]
FABG3_BRANA7.082e-1327.273-oxoacyl-[acyl-carrier-protein] reductase 3, chlo... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS09_14H02_g Ruby Orange Developing Seed cDNA Library UCRCS09 Citrus sinensis cDNA clone UCRCS09-14H02-P3-1-4.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX047557 ID=CX047557; Name=CX047557; organism=Citrus sinensis; type=EST; length=832bp
ATGGATTTGATTAACAAGTTCCTTAATCTTGTGGCACCCCCCTTCACCTT
ATTCTCCCTGTGCCTCTTCTTACCACCATTTCTATGTTACAAGTTCTTAC
TCTCCGTCTTTAACTCCATATTCAGTGAAGATGTTTCCGGAAAGGTCGTC
ATCATCACCGGTGCTTCCTCCGGCATCGGAGAGCACTTGGCGTATGAGTA
TGCTAGAAGAGGAGCCTGCCTAGCTCTATGCGCCCGCAGGGAAAAGAGTC
TTGAAGAAGTTGCCGATACAGCGCGTGAAATCGGCTCTCCTGATGTTATC
ACGATTCGTGCTGACGTTTCAAAAGTTGATGACTGTAGGAGCCTTGTTGA
AGAAACTATGAATCACTTTGGCAGATTGGATCATCTTGTGAATAATGCTG
GGATTTCTTCAGTTGCCCTGTTCGAAGATATTGTTAATATCACCGATTTT
AAGCAAATAATGAACATAAATTTCTGGGGATCAGTTTATACCACTCGATT
TGCGGTTCCACATCTTAGATATACCAAAGGCAAGATCGTGGTTTTATCAT
CCGCTGCTTCATGGCTAACTGCACCAAGAATGAGCTTTTACAATGCAAGC
AAAGCGGCGTTGGTACTCTTTTTCGAAACATTAAGGGTCGAACTTGGTTC
CGACGTTGGTGTAACAATTGTTACGCCTGGGTTCATAGAGTCGGAATTAA
CCCAAGGAAAATTCTTAACGGGAGAAGGCAGAATTCAGATAGATGAAAAC
TTAAGAGATGCTCAAGTGAGCACTATCCCAGTTCAATCAGCGTGGTCATG
TGCAAAGGCGATAGTGAACAGTGTATGCCGCG
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