CX047526
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX047526 vs. ExPASy Swiss-Prot
Match: RS13_GILMI (40S ribosomal protein S13 OS=Gillichthys mirabilis GN=rps13 PE=2 SV=3) HSP 1 Score: 170.629 bits (431), Expect = 6.225e-42 Identity = 83/103 (80.58%), Postives = 94/103 (91.26%), Query Frame = 2 Query: 2 QIGVILRDSHGIAQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVESRIHRLARYYKKTKKLPPVWKYESTTASTLVA 310 QIGVILRDSHG+AQV+ VTG+KILRILK+ GLAP++PEDLYHLIKKAVA+RKHLERNRKDKD+KFRLIL+ESRIHRLARYYK + L P WKY S+TAS LVA Sbjct: 49 QIGVILRDSHGVAQVRFVTGNKILRILKSKGLAPDLPEDLYHLIKKAVAVRKHLERNRKDKDAKFRLILIESRIHRLARYYKTKRVLAPNWKYXSSTASALVA 151
BLAST of CX047526 vs. ExPASy Swiss-Prot
Match: RS13_CANMA (40S ribosomal protein S13 OS=Candida maltosa GN=RPS13 PE=3 SV=2) HSP 1 Score: 170.629 bits (431), Expect = 6.225e-42 Identity = 82/103 (79.61%), Postives = 93/103 (90.29%), Query Frame = 2 Query: 2 QIGVILRDSHGIAQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVESRIHRLARYYKKTKKLPPVWKYESTTASTLVA 310 QIGVILRD+HG++Q K VTG+K+LRILK++GLAPE+PEDLY LIKKAVA+RKHLERNRKDKDSKFRLIL+ESRIHRLARYY+ LPP WKYES TAS LVA Sbjct: 49 QIGVILRDAHGVSQAKIVTGNKVLRILKSNGLAPELPEDLYFLIKKAVAVRKHLERNRKDKDSKFRLILIESRIHRLARYYRTVSVLPPNWKYESATASALVA 151
BLAST of CX047526 vs. ExPASy Swiss-Prot
Match: RS13_PLUXY (40S ribosomal protein S13 OS=Plutella xylostella GN=RpS13 PE=2 SV=3) HSP 1 Score: 169.474 bits (428), Expect = 1.387e-41 Identity = 84/103 (81.55%), Postives = 93/103 (90.29%), Query Frame = 2 Query: 2 QIGVILRDSHGIAQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVESRIHRLARYYKKTKKLPPVWKYESTTASTLVA 310 QIGV+LRDSHG+AQV+ VTG KILRI+KA GLAP++PEDLY+LIKKAVA+ KHLERNRKDKDSKFRLILVESRIHRLARYYK LPP WKYES+TAS LVA Sbjct: 49 QIGVMLRDSHGVAQVRFVTGKKILRIMKAMGLAPDLPEDLYYLIKKAVAMGKHLERNRKDKDSKFRLILVESRIHRLARYYKTKSVLPPNWKYESSTASALVA 151
BLAST of CX047526 vs. ExPASy Swiss-Prot
Match: RS13_CHOPR (40S ribosomal protein S13 OS=Choristoneura parallela GN=RpS13 PE=2 SV=3) HSP 1 Score: 169.088 bits (427), Expect = 1.811e-41 Identity = 84/103 (81.55%), Postives = 92/103 (89.32%), Query Frame = 2 Query: 2 QIGVILRDSHGIAQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVESRIHRLARYYKKTKKLPPVWKYESTTASTLVA 310 QIGV LRDSHG+ QV+ VTG KILRI+KA GLAP++PEDLY+LIKKAVA+RKHLERNRKDKDSKFRLILVESRIHRLARYYK LPP WKYES+TAS LVA Sbjct: 49 QIGVKLRDSHGVVQVRFVTGKKILRIMKAMGLAPDLPEDLYYLIKKAVAMRKHLERNRKDKDSKFRLILVESRIHRLARYYKTKSVLPPNWKYESSTASALVA 151
BLAST of CX047526 vs. ExPASy Swiss-Prot
Match: RS13_MUSDO (40S ribosomal protein S13 (Fragment) OS=Musca domestica GN=RpS13 PE=3 SV=1) HSP 1 Score: 168.318 bits (425), Expect = 3.089e-41 Identity = 82/103 (79.61%), Postives = 92/103 (89.32%), Query Frame = 2 Query: 2 QIGVILRDSHGIAQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVESRIHRLARYYKKTKKLPPVWKYESTTASTLVA 310 +IG+ILRDSHG+AQV+ V G+KILRI+K+ GL P+IPEDLYH+IKKAVAIRKHLERNRKDKD KFRLILVESRIHRLARYYK LPP WKYES+TAS LVA Sbjct: 12 KIGIILRDSHGVAQVRFVNGNKILRIMKSVGLKPDIPEDLYHMIKKAVAIRKHLERNRKDKDGKFRLILVESRIHRLARYYKTKSVLPPNWKYESSTASALVA 114
BLAST of CX047526 vs. ExPASy Swiss-Prot
Match: RS13_DROME (40S ribosomal protein S13 OS=Drosophila melanogaster GN=RpS13 PE=2 SV=3) HSP 1 Score: 168.318 bits (425), Expect = 3.089e-41 Identity = 82/103 (79.61%), Postives = 92/103 (89.32%), Query Frame = 2 Query: 2 QIGVILRDSHGIAQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVESRIHRLARYYKKTKKLPPVWKYESTTASTLVA 310 +IG+ILRDSHG+AQV+ V G+KILRI+K+ GL P+IPEDLYH+IKKAVAIRKHLERNRKDKD KFRLILVESRIHRLARYYK LPP WKYES+TAS LVA Sbjct: 49 KIGIILRDSHGVAQVRFVNGNKILRIMKSVGLKPDIPEDLYHMIKKAVAIRKHLERNRKDKDGKFRLILVESRIHRLARYYKTKSVLPPNWKYESSTASALVA 151
BLAST of CX047526 vs. ExPASy Swiss-Prot
Match: RS13_CIOIN (40S ribosomal protein S13 OS=Ciona intestinalis GN=RPS13 PE=2 SV=3) HSP 1 Score: 167.933 bits (424), Expect = 4.035e-41 Identity = 83/103 (80.58%), Postives = 91/103 (88.35%), Query Frame = 2 Query: 2 QIGVILRDSHGIAQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVESRIHRLARYYKKTKKLPPVWKYESTTASTLVA 310 QIGVILRDSHG AQV+ VTG++ILR+LKA GLAP++PED+YHLIKKAVA+RKHLERNRKD DSKFRLILVESRIHRL RYYK LPP WKYES TAS LVA Sbjct: 49 QIGVILRDSHGXAQVRFVTGNQILRVLKAKGLAPDLPEDIYHLIKKAVAMRKHLERNRKDTDSKFRLILVESRIHRLGRYYKTKGVLPPNWKYESATASALVA 151
BLAST of CX047526 vs. ExPASy Swiss-Prot
Match: RS13_YEAST (40S ribosomal protein S13 OS=Saccharomyces cerevisiae GN=RPS13 PE=1 SV=3) HSP 1 Score: 165.236 bits (417), Expect = 2.615e-40 Identity = 77/102 (75.49%), Postives = 92/102 (90.20%), Query Frame = 2 Query: 2 QIGVILRDSHGIAQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVESRIHRLARYYKKTKKLPPVWKYESTTASTLV 307 QIGV+LRD+HG+ Q + +TG+KI+RILK++GLAPEIPEDLY+LIKKAV++RKHLERNRKDKD+KFRLIL+ESRIHRLARYY+ LPP WKYES TAS LV Sbjct: 49 QIGVLLRDAHGVTQARVITGNKIMRILKSNGLAPEIPEDLYYLIKKAVSVRKHLERNRKDKDAKFRLILIESRIHRLARYYRTVAVLPPNWKYESATASALV 150
BLAST of CX047526 vs. ExPASy Swiss-Prot
Match: RS13_CAEEL (40S ribosomal protein S13 OS=Caenorhabditis elegans GN=rps-13 PE=2 SV=2) HSP 1 Score: 165.236 bits (417), Expect = 2.615e-40 Identity = 78/103 (75.73%), Postives = 93/103 (90.29%), Query Frame = 2 Query: 2 QIGVILRDSHGIAQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVESRIHRLARYYKKTKKLPPVWKYESTTASTLVA 310 QIGVILRDSHG+ QV+ + G+KI RILK+ G+APE+PEDLYHL+KKAVAIRKHLER+RKD DSK+RLILVESRIHRLARYYK ++LPP WKYES TA++LV+ Sbjct: 49 QIGVILRDSHGVGQVRRLAGNKIFRILKSKGMAPELPEDLYHLVKKAVAIRKHLERSRKDIDSKYRLILVESRIHRLARYYKTKRQLPPTWKYESGTAASLVS 151
BLAST of CX047526 vs. ExPASy Swiss-Prot
Match: RS13_ANOGA (40S ribosomal protein S13 OS=Anopheles gambiae GN=RpS13 PE=2 SV=2) HSP 1 Score: 163.696 bits (413), Expect = 7.609e-40 Identity = 81/103 (78.64%), Postives = 91/103 (88.35%), Query Frame = 2 Query: 2 QIGVILRDSHGIAQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVESRIHRLARYYKKTKKLPPVWKYESTTASTLVA 310 QIG+ILRDSHG+AQV+ V G+K+LRI+KA GL P+IPEDLY LIKKAV+IRKHLERNRKD DSKFRLIL+ESRIHRLARYYK LPP WKYES+TAS LVA Sbjct: 49 QIGIILRDSHGVAQVRFVNGNKVLRIMKAVGLKPDIPEDLYFLIKKAVSIRKHLERNRKDIDSKFRLILIESRIHRLARYYKIKAVLPPNWKYESSTASALVA 151 The following BLAST results are available for this feature:
BLAST of CX047526 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 81
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Sequences
The
following sequences are available for this feature:
EST sequence >CX047526 ID=CX047526; Name=CX047526; organism=Citrus sinensis; type=EST; length=654bpback to top |