CX047526
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX047526 vs. ExPASy Swiss-Prot
Match: RS15_METST (30S ribosomal protein S15P/S13e OS=Methanosphaera stadtmanae (strain DSM 3091) GN=rps15p PE=3 SV=1) HSP 1 Score: 104.76 bits (260), Expect = 4.195e-22 Identity = 54/102 (52.94%), Postives = 68/102 (66.67%), Query Frame = 2 Query: 2 QIGVILRDSHGIAQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVESRIHRLARYYKKTKKLPPVWKYESTTASTLV 307 QIG+ LRD HGI K+V G KI ILK +G E PEDL +LIK+AV IR+HLE N KD +K LI +ES+I RL +YY + LP W+Y+ TA+ LV Sbjct: 31 QIGITLRDQHGIPNTKAVLGEKITDILKRNGTDFEYPEDLLNLIKRAVNIREHLEENPKDIHTKRGLIKIESKIRRLVKYYTRNNVLPEGWRYDPKTAALLV 132
BLAST of CX047526 vs. ExPASy Swiss-Prot
Match: RS15_METMA (30S ribosomal protein S15P/S13e OS=Methanosarcina mazei GN=rps15p PE=3 SV=1) HSP 1 Score: 103.605 bits (257), Expect = 9.345e-22 Identity = 51/102 (50.00%), Postives = 69/102 (67.65%), Query Frame = 2 Query: 2 QIGVILRDSHGIAQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVESRIHRLARYYKKTKKLPPVWKYESTTASTLV 307 +IG+ILRD +G+ K VTG KI ILK + +AP +PEDL +LI KA+ +RKHL N+KD +K L L ES+I RL +YYK+ K LP W Y+ TA ++ Sbjct: 49 EIGMILRDRYGVPDAKLVTGKKITTILKENNVAPNLPEDLTNLIVKALGLRKHLSTNKKDVHNKRALNLTESKIRRLVKYYKQEKVLPRDWFYKPETAEMMI 150
BLAST of CX047526 vs. ExPASy Swiss-Prot
Match: RS15_METAC (30S ribosomal protein S15P/S13e OS=Methanosarcina acetivorans GN=rps15p PE=3 SV=1) HSP 1 Score: 102.449 bits (254), Expect = 2.082e-21 Identity = 49/102 (48.04%), Postives = 69/102 (67.65%), Query Frame = 2 Query: 2 QIGVILRDSHGIAQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVESRIHRLARYYKKTKKLPPVWKYESTTASTLV 307 +IG++LRD +G+ K +TG K+ ILK + +AP IPEDL +LI KA+ +RKHL N+KD +K L L ES+I RL +YYK+ K LP W Y+ TA ++ Sbjct: 49 EIGMVLRDRYGVPDAKLITGKKVTTILKENNVAPNIPEDLTNLIVKALGLRKHLSVNKKDVHNKRSLNLTESKIRRLVKYYKQEKVLPRDWFYKPETAEMMI 150
BLAST of CX047526 vs. ExPASy Swiss-Prot
Match: RS15_METM7 (30S ribosomal protein S15P/S13e OS=Methanococcus maripaludis (strain C7 / ATCC BAA-1331) GN=rps15p PE=3 SV=1) HSP 1 Score: 102.064 bits (253), Expect = 2.719e-21 Identity = 50/101 (49.50%), Postives = 66/101 (65.35%), Query Frame = 2 Query: 5 IGVILRDSHGIAQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVESRIHRLARYYKKTKKLPPVWKYESTTASTLV 307 IG ILRD +G+ VK VTG + I+K G E+PEDL++L+KKA+ +R HLE N +D S L L+ES+I RL +YY+ TK LP W+Y TA LV Sbjct: 50 IGNILRDMYGVPSVKLVTGKSVSSIMKEAGFYTEVPEDLFNLMKKAINLRNHLENNPRDTHSTVGLKLIESKIRRLVKYYRGTKVLPAKWRYSPDTARLLV 150
BLAST of CX047526 vs. ExPASy Swiss-Prot
Match: RS15_METBU (30S ribosomal protein S15P/S13e OS=Methanococcoides burtonii (strain DSM 6242) GN=rps15p PE=3 SV=1) HSP 1 Score: 102.064 bits (253), Expect = 2.719e-21 Identity = 49/101 (48.51%), Postives = 67/101 (66.34%), Query Frame = 2 Query: 5 IGVILRDSHGIAQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVESRIHRLARYYKKTKKLPPVWKYESTTASTLV 307 IG++LRD++G+ VK TG K+ IL+ + P +PEDLY+LI KA+ +RKHL N KD +K L ES+I RL +YY+ TK LP WKY+ TA L+ Sbjct: 50 IGMVLRDNYGVPDVKLATGKKVTEILRDNSEEPNVPEDLYNLIVKAIGLRKHLVVNNKDVHNKRSLQSAESKIRRLVKYYQSTKVLPIDWKYKPETAEMLI 150
BLAST of CX047526 vs. ExPASy Swiss-Prot
Match: RS15_SULAC (30S ribosomal protein S15P/S13e OS=Sulfolobus acidocaldarius GN=rps15p PE=3 SV=1) HSP 1 Score: 101.679 bits (252), Expect = 3.551e-21 Identity = 50/101 (49.50%), Postives = 69/101 (68.32%), Query Frame = 2 Query: 5 IGVILRDSHGIAQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVESRIHRLARYYKKTKKLPPVWKYESTTASTLV 307 IG++LRD +G+ VK +TG K+ IL+ + P+IPEDL++L+++AV IR+HL KDK +K L VES+I RLA YYK+T KLP W Y+ A LV Sbjct: 48 IGMVLRDQYGVPLVKQITGRKLTAILQDRNMKPKIPEDLFNLMRRAVNIRRHLFEYPKDKSAKRGLEEVESKIRRLASYYKETGKLPQEWSYDPAKAELLV 148
BLAST of CX047526 vs. ExPASy Swiss-Prot
Match: RS15_METMP (30S ribosomal protein S15P/S13e OS=Methanococcus maripaludis GN=rps15p PE=3 SV=1) HSP 1 Score: 101.679 bits (252), Expect = 3.551e-21 Identity = 49/101 (48.51%), Postives = 66/101 (65.35%), Query Frame = 2 Query: 5 IGVILRDSHGIAQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVESRIHRLARYYKKTKKLPPVWKYESTTASTLV 307 IG ILRD +G+ VK +TG + I+K G E+PEDL++L+KKA+ +R HLE N +D S L L+ES+I RL +YY+ TK LP W+Y TA LV Sbjct: 50 IGNILRDMYGVPNVKLITGKSVSSIMKEAGFYAEVPEDLFNLMKKAINLRNHLENNPRDTHSTVGLKLIESKIRRLVKYYRGTKVLPAKWRYSPETARLLV 150
BLAST of CX047526 vs. ExPASy Swiss-Prot
Match: RS15_METM5 (30S ribosomal protein S15P/S13e OS=Methanococcus maripaludis (strain C5 / ATCC BAA-1333) GN=rps15p PE=3 SV=1) HSP 1 Score: 101.679 bits (252), Expect = 3.551e-21 Identity = 49/101 (48.51%), Postives = 66/101 (65.35%), Query Frame = 2 Query: 5 IGVILRDSHGIAQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVESRIHRLARYYKKTKKLPPVWKYESTTASTLV 307 IG ILRD +G+ VK +TG + I+K G E+PEDL++L+KKA+ +R HLE N +D S L L+ES+I RL +YY+ TK LP W+Y TA LV Sbjct: 50 IGNILRDMYGVPNVKLITGKSVSSIMKEAGFYAEVPEDLFNLMKKAINLRNHLENNPRDTHSTVGLKLIESKIRRLVKYYRGTKVLPAKWRYSPETARLLV 150
BLAST of CX047526 vs. ExPASy Swiss-Prot
Match: RS15_METLZ (30S ribosomal protein S15P/S13e OS=Methanocorpusculum labreanum (strain ATCC 43576 / DSM 4855 / Z) GN=rps15p PE=3 SV=1) HSP 1 Score: 101.679 bits (252), Expect = 3.551e-21 Identity = 49/103 (47.57%), Postives = 72/103 (69.90%), Query Frame = 2 Query: 2 QIGVILRDSHGIAQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVESRIHRLARYYKKTKKLPPVWKYESTTASTLVA 310 QIG++LRD HG+ VK TG +I I++ + L +IPEDL +L+ KA+ +RKHLE+NRKD +K +L L E+++ RL +YY TK+LP W Y+ TA L++ Sbjct: 49 QIGLVLRDKHGVPNVKLATGKRINAIVRENDLDTDIPEDLRNLMHKALMMRKHLEQNRKDLHNKRQLQLTEAKVRRLVKYYVGTKRLPLGWVYKPETAEILLS 151
BLAST of CX047526 vs. ExPASy Swiss-Prot
Match: RS15_PYRFU (30S ribosomal protein S15P/S13e OS=Pyrococcus furiosus GN=rps15p PE=3 SV=1) HSP 1 Score: 101.293 bits (251), Expect = 4.638e-21 Identity = 56/108 (51.85%), Postives = 69/108 (63.89%), Query Frame = 2 Query: 5 IGVILRDSHGIAQVKSVTGSK-------ILRILKAHGLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVESRIHRLARYYKKTKKLPPVWKYESTTASTLV 307 IG ILRD +GI VK I RIL+ HGLAPEIPEDL LI++AV +RKHLE++ KD S L L+ES+I RL +YYK+ KLP W+Y+ TA LV Sbjct: 50 IGTILRDQYGIPSVKLFKDPDNPNRNLTITRILEKHGLAPEIPEDLMFLIRRAVNLRKHLEQHPKDLHSMRGLQLIESKIRRLVKYYKRKGKLPKNWRYDPETAKLLV 157 The following BLAST results are available for this feature:
BLAST of CX047526 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 81
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Sequences
The
following sequences are available for this feature:
EST sequence >CX047526 ID=CX047526; Name=CX047526; organism=Citrus sinensis; type=EST; length=654bpback to top |