CX047526
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX047526 vs. ExPASy Swiss-Prot
Match: RS15_METS5 (30S ribosomal protein S15P/S13e OS=Metallosphaera sedula (strain ATCC 51363 / DSM 5348) GN=rps15p PE=3 SV=1) HSP 1 Score: 100.138 bits (248), Expect = 1.033e-20 Identity = 48/102 (47.06%), Postives = 69/102 (67.65%), Query Frame = 2 Query: 5 IGVILRDSHGIAQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVESRIHRLARYYKKTKKLPPVWKYESTTASTLVA 310 IG++LRD +GI K + G K+ + LK GLA +IPEDL++LI++AV +R+HL DK +K L +ES+I RL+RYYK+ +KLP W Y+ A LV+ Sbjct: 48 IGIVLRDQYGIPLAKPIIGKKVNQFLKDKGLASQIPEDLFNLIRRAVNVRRHLNEYPGDKTAKKGLEEIESKIRRLSRYYKRVEKLPQDWTYDPAKAELLVS 149
BLAST of CX047526 vs. ExPASy Swiss-Prot
Match: RS15_HYPBU (30S ribosomal protein S15P/S13e OS=Hyperthermus butylicus (strain DSM 5456 / JCM 9403) GN=rps15p PE=3 SV=1) HSP 1 Score: 100.138 bits (248), Expect = 1.033e-20 Identity = 50/102 (49.02%), Postives = 67/102 (65.69%), Query Frame = 2 Query: 5 IGVILRDSHGIAQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVESRIHRLARYYKKTKKLPPVWKYESTTASTLVA 310 IG+ILRD GI VK + G I +L+ G+ +PEDL+ LI+KAV +R+HLE + KD +K L+ +ES+I RLA YYK+ KLP WKY+ A LVA Sbjct: 49 IGIILRDQFGIPLVKPILGKSITEVLEERGIKMVVPEDLFRLIEKAVNLRRHLEEHPKDTHAKKGLLDLESKIRRLAEYYKRVGKLPRDWKYDPQQAKLLVA 150
BLAST of CX047526 vs. ExPASy Swiss-Prot
Match: RS15_PYRAB (30S ribosomal protein S15P/S13e OS=Pyrococcus abyssi GN=rps15p PE=3 SV=1) HSP 1 Score: 99.7525 bits (247), Expect = 1.349e-20 Identity = 56/108 (51.85%), Postives = 68/108 (62.96%), Query Frame = 2 Query: 5 IGVILRDSHGIAQVKSVTGSK-------ILRILKAHGLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVESRIHRLARYYKKTKKLPPVWKYESTTASTLV 307 IG ILRD +GI VK I RIL+ HGLAPEIPEDL LIK+AV +RKHLE++ KD S L L+ES+I RL +YYK+ KLP W+Y+ A LV Sbjct: 50 IGTILRDQYGIPTVKLFRDPDNPNRKLTITRILEKHGLAPEIPEDLMFLIKRAVNLRKHLEQHPKDLHSMRGLQLIESKIRRLVKYYKRKGKLPKDWRYDPEQAKLLV 157
BLAST of CX047526 vs. ExPASy Swiss-Prot
Match: RS15_METS3 (30S ribosomal protein S15P/S13e OS=Methanobrevibacter smithii (strain PS / ATCC 35061 / DSM 861) GN=rps15p PE=3 SV=1) HSP 1 Score: 99.7525 bits (247), Expect = 1.349e-20 Identity = 53/102 (51.96%), Postives = 66/102 (64.71%), Query Frame = 2 Query: 2 QIGVILRDSHGIAQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVESRIHRLARYYKKTKKLPPVWKYESTTASTLV 307 +IG+ILRD +GI VK VTG +I +ILK + A + PEDL +LIK+AV IR HL N KD SK L ++ESRI RLA YY LP W+Y A+ LV Sbjct: 30 EIGIILRDQYGIPSVKEVTGERITQILKRNDQAGKYPEDLMNLIKRAVNIRDHLAENPKDLHSKRGLTIIESRIRRLASYYVNEGALPEGWRYNPKEAALLV 131
BLAST of CX047526 vs. ExPASy Swiss-Prot
Match: RS15_ARCFU (30S ribosomal protein S15P/S13e OS=Archaeoglobus fulgidus GN=rps15p PE=3 SV=1) HSP 1 Score: 99.7525 bits (247), Expect = 1.349e-20 Identity = 51/92 (55.43%), Postives = 66/92 (71.74%), Query Frame = 2 Query: 5 IGVILRDSHGIAQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVESRIHRLARYYKKTKKLPPVWKY 280 IG+ILRD +GI VK VTG KI +ILK HG+ + PEDL LIKKA+ +R HLE +RKDK ++ L L+E++I RL+ YYK+ LP WKY Sbjct: 50 IGMILRDRYGIPSVKQVTGKKIQKILKEHGVEIKYPEDLKALIKKALKLRAHLEVHRKDKHNRRGLQLIEAKIWRLSSYYKEKGVLPADWKY 141
BLAST of CX047526 vs. ExPASy Swiss-Prot
Match: RS15_AERPE (30S ribosomal protein S15P/S13e OS=Aeropyrum pernix GN=rps15p PE=3 SV=1) HSP 1 Score: 99.7525 bits (247), Expect = 1.349e-20 Identity = 49/102 (48.04%), Postives = 68/102 (66.67%), Query Frame = 2 Query: 5 IGVILRDSHGIAQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVESRIHRLARYYKKTKKLPPVWKYESTTASTLVA 310 IG+ILRD +GI VK + G + +L+ GL P +PEDL LI+KAV +R+HL+ + KD +K LI +ES+I RL +YYK+ LPP WKY+ A LV+ Sbjct: 48 IGIILRDQYGIPLVKPILGKGVSEVLREKGLHPPLPEDLLMLIRKAVNLRRHLDEHPKDYHAKKGLIDLESKIRRLVKYYKRRGVLPPDWKYDPEAAKLLVS 149
BLAST of CX047526 vs. ExPASy Swiss-Prot
Match: RS15_CALMQ (30S ribosomal protein S15P/S13e OS=Caldivirga maquilingensis (strain DSMZ 13496 / IC-167) GN=rps15p PE=3 SV=1) HSP 1 Score: 99.3673 bits (246), Expect = 1.762e-20 Identity = 51/92 (55.43%), Postives = 66/92 (71.74%), Query Frame = 2 Query: 5 IGVILRDSHGIAQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVESRIHRLARYYKKTKKLPPVWKY 280 IGVILRD +GI VK VT +I IL+ +GL P+IPEDL LI++AV IR+HLE + KD +K L+L ES+IHRL +YYK+T LP + Y Sbjct: 50 IGVILRDQYGIPLVKIVTNKRITEILEENGLKPQIPEDLMALIRRAVNIRRHLEEHPKDMSAKKGLLLTESKIHRLIKYYKRTGVLPLDFTY 141
BLAST of CX047526 vs. ExPASy Swiss-Prot
Match: RS15_PYRHO (30S ribosomal protein S15P/S13e OS=Pyrococcus horikoshii GN=rps15p PE=3 SV=1) HSP 1 Score: 98.2117 bits (243), Expect = 3.926e-20 Identity = 55/108 (50.93%), Postives = 68/108 (62.96%), Query Frame = 2 Query: 5 IGVILRDSHGIAQVKSVTGSK-------ILRILKAHGLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVESRIHRLARYYKKTKKLPPVWKYESTTASTLV 307 IG ILRD +GI VK I RIL+ HGLAPEIPEDL LI++AV +RKHLE++ KD S L L+ES+I RL +YYK+ KLP W+Y+ A LV Sbjct: 50 IGTILRDQYGIPTVKLFRDPDNPNRKLTITRILEKHGLAPEIPEDLMFLIRRAVNLRKHLEQHPKDLHSMRGLQLIESKIRRLVKYYKRKGKLPRDWRYDPEQAKLLV 157
BLAST of CX047526 vs. ExPASy Swiss-Prot
Match: RS15_METMJ (30S ribosomal protein S15P/S13e OS=Methanoculleus marisnigri (strain ATCC 35101 / DSM 1498 / JR1) GN=rps15p PE=3 SV=1) HSP 1 Score: 96.6709 bits (239), Expect = 1.142e-19 Identity = 46/102 (45.10%), Postives = 68/102 (66.67%), Query Frame = 2 Query: 2 QIGVILRDSHGIAQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVESRIHRLARYYKKTKKLPPVWKYESTTASTLV 307 QIG++LRD + + VK TG +I IL+ GL EIPEDL +L++KA+ IRKHL N KD +K +L + ES++ RL +YY ++ ++P W Y+ TA L+ Sbjct: 49 QIGLVLRDRYAVPDVKLATGKRIGEILREKGLESEIPEDLRNLMEKALGIRKHLAENNKDVHNKRQLQIAESKVRRLVKYYVRSGRMPKGWTYKPETAEILL 150
BLAST of CX047526 vs. ExPASy Swiss-Prot
Match: RS15_METBF (30S ribosomal protein S15P/S13e OS=Methanosarcina barkeri (strain Fusaro / DSM 804) GN=rps15p PE=3 SV=1) HSP 1 Score: 96.6709 bits (239), Expect = 1.142e-19 Identity = 47/102 (46.08%), Postives = 67/102 (65.69%), Query Frame = 2 Query: 2 QIGVILRDSHGIAQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVESRIHRLARYYKKTKKLPPVWKYESTTASTLV 307 +IG+ LRD +G+ K +TG KI ILK + + P +PEDL +LI KA+ +RKHL N+KD +K L L ES+I RL +YY++ K LP W Y+ TA ++ Sbjct: 49 EIGMTLRDRYGVPDAKLITGKKITTILKENNVYPNVPEDLTNLIVKALRLRKHLSVNKKDVHNKRALNLTESKIRRLVKYYQQEKVLPRDWFYKPETAEMMI 150 The following BLAST results are available for this feature:
BLAST of CX047526 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 81
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CX047526 ID=CX047526; Name=CX047526; organism=Citrus sinensis; type=EST; length=654bpback to top |